Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_O19
(321 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 65 9e-12
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 65 9e-12
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 37 0.003
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 37 0.003
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 37 0.003
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 25 9.2
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 25 9.2
AF039052-2|AAF98629.1| 400|Caenorhabditis elegans Hypothetical ... 25 9.2
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 65.3 bits (152), Expect = 9e-12
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = +2
Query: 80 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYXQXLEDLQK- 253
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y + +E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 254 -GGTGECRYGLFDFEYTHQCQG 316
ECRY D E T Q QG
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQG 82
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 65.3 bits (152), Expect = 9e-12
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = +2
Query: 80 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYXQXLEDLQK- 253
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y + +E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 254 -GGTGECRYGLFDFEYTHQCQG 316
ECRY D E T Q QG
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQG 82
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.003
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 17/91 (18%)
Frame = +2
Query: 80 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 217
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 218 -AEYXQXLEDLQK--GGTGECRYGLFDFEYT 301
A + + +ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 37.1 bits (82), Expect = 0.003
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 17/91 (18%)
Frame = +2
Query: 80 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 217
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 218 -AEYXQXLEDLQK--GGTGECRYGLFDFEYT 301
A + + +ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 37.1 bits (82), Expect = 0.003
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 17/91 (18%)
Frame = +2
Query: 80 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 217
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 218 -AEYXQXLEDLQK--GGTGECRYGLFDFEYT 301
A + + +ED++ +CRY +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 294 SKSNRPYLHSPVPPFCRSSRXCXYSALRSPTVST 193
S N P HSP PPF S+ Y+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTSN--SSYNNIKKSTDNT 219
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 294 SKSNRPYLHSPVPPFCRSSRXCXYSALRSPTVST 193
S N P HSP PPF S+ Y+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTSN--SSYNNIKKSTDNT 219
>AF039052-2|AAF98629.1| 400|Caenorhabditis elegans Hypothetical
protein T22D1.8 protein.
Length = 400
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 303 CVYSKSNRPYLHSPVPPFCRSSRXCXYSALRSPTVSTS 190
C+Y++S L PV CRS+R +R P+VST+
Sbjct: 286 CLYTRSRS--LSIPVYS-CRSARYAACMDIRDPSVSTT 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,335,028
Number of Sequences: 27780
Number of extensions: 100400
Number of successful extensions: 419
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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