Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_O15
(606 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013590-1|AAH13590.1| 721|Homo sapiens eukaryotic translation ... 107 4e-23
AK091646-1|BAC03712.1| 721|Homo sapiens protein ( Homo sapiens ... 107 4e-23
U23028-1|AAC50646.1| 641|Homo sapiens eIF-2Bepsilon protein. 73 1e-12
AK222951-1|BAD96671.1| 420|Homo sapiens GDP-mannose pyrophospho... 31 3.1
BC115382-1|AAI15383.1| 246|Homo sapiens XRCC6 binding protein 1... 29 9.6
BC115381-1|AAI15382.1| 246|Homo sapiens XRCC6 binding protein 1... 29 9.6
BC012776-1|AAH12776.3| 246|Homo sapiens XRCC6 binding protein 1... 29 9.6
BC010363-1|AAH10363.1| 436|Homo sapiens LINS1 protein protein. 29 9.6
AK001445-1|BAA91696.1| 409|Homo sapiens protein ( Homo sapiens ... 29 9.6
AF078164-1|AAD31085.1| 288|Homo sapiens Ku70-binding protein pr... 29 9.6
AB083157-1|BAB93864.1| 757|Homo sapiens WINS1 protein with Dros... 29 9.6
>BC013590-1|AAH13590.1| 721|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 5 epsilon, 82kDa protein.
Length = 721
Score = 107 bits (256), Expect = 4e-23
Identities = 57/153 (37%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Frame = +3
Query: 63 VQAVVIMDTFNSNFSPITDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQKI 242
+QAV++ D+F+ F PI+ ++P L +A V LIDY LE L GV E +FCC +I
Sbjct: 43 LQAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 102
Query: 243 KEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMRELDAAALLKGYFVLAGINSITNMN 422
KEH+ K + + SL + ++I+ S+ +++GDV+R++DA AL++ F+L + I+N+N
Sbjct: 103 KEHLLKSKWCRPT-SLNV-VRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNIN 160
Query: 423 FASLLEQHKQTCKKDXG-TAMTLVYKKLSWEHP 518
LE+H+ K + + MT+++K+ S HP
Sbjct: 161 ITRALEEHRLRRKLEKNVSVMTMIFKESSPSHP 193
>AK091646-1|BAC03712.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ34327 fis, clone FEBRA2009022, highly similar to
TRANSLATION INITIATION FACTOR EIF-2B EPSILON SUBUNIT. ).
Length = 721
Score = 107 bits (256), Expect = 4e-23
Identities = 57/153 (37%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Frame = +3
Query: 63 VQAVVIMDTFNSNFSPITDNKPMGFLEVAGVPLIDYVLESLALGGVGEAILFCCQNGQKI 242
+QAV++ D+F+ F PI+ ++P L +A V LIDY LE L GV E +FCC +I
Sbjct: 43 LQAVLVADSFDRRFFPISKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQI 102
Query: 243 KEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMRELDAAALLKGYFVLAGINSITNMN 422
KEH+ K + + SL + ++I+ S+ +++GDV+R++DA AL++ F+L + I+N+N
Sbjct: 103 KEHLLKSKWCRPT-SLNV-VRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNIN 160
Query: 423 FASLLEQHKQTCKKDXG-TAMTLVYKKLSWEHP 518
LE+H+ K + + MT+++K+ S HP
Sbjct: 161 ITRALEEHRLRRKLEKNVSVMTMIFKESSPSHP 193
>U23028-1|AAC50646.1| 641|Homo sapiens eIF-2Bepsilon protein.
Length = 641
Score = 72.5 bits (170), Expect = 1e-12
Identities = 40/115 (34%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Frame = +3
Query: 177 ESLALGGVGEAILFCCQNGQKIKEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMREL 356
E L GV E +FCC +IKEH+ K + + SL + ++I+ S+ +++GDV+R++
Sbjct: 1 EFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPT-SLNV-VRIITSELYRSLGDVLRDV 58
Query: 357 DAAALLKGYFVLAGINSITNMNFASLLEQHKQTCKKDXG-TAMTLVYKKLSWEHP 518
DA AL++ F+L + I+N+N LE+H+ K + + MT+++K+ S HP
Sbjct: 59 DAKALVRSDFLLVYGDVISNINITRALEEHRLRRKLEKNVSVMTMIFKESSPSHP 113
>AK222951-1|BAD96671.1| 420|Homo sapiens GDP-mannose
pyrophosphorylase A variant protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 96 SNFSPITDNKPMGFLEVAGVPLIDYVLESLA-LGGVGEAILFC 221
+ F P++ P VAGVP+I + +E+ A + G+ E +L C
Sbjct: 15 TRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQVPGMQEILLIC 57
>BC115382-1|AAI15383.1| 246|Homo sapiens XRCC6 binding protein 1
protein.
Length = 246
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 399 INSITNMNFASLLEQHKQTCKKDXGTAMTLVYKKLSWE 512
+N I ++F L+QH QTC +D T L + +S E
Sbjct: 164 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 199
>BC115381-1|AAI15382.1| 246|Homo sapiens XRCC6 binding protein 1
protein.
Length = 246
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 399 INSITNMNFASLLEQHKQTCKKDXGTAMTLVYKKLSWE 512
+N I ++F L+QH QTC +D T L + +S E
Sbjct: 164 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 199
>BC012776-1|AAH12776.3| 246|Homo sapiens XRCC6 binding protein 1
protein.
Length = 246
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 399 INSITNMNFASLLEQHKQTCKKDXGTAMTLVYKKLSWE 512
+N I ++F L+QH QTC +D T L + +S E
Sbjct: 164 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 199
>BC010363-1|AAH10363.1| 436|Homo sapiens LINS1 protein protein.
Length = 436
Score = 29.5 bits (63), Expect = 9.6
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 210 ILFCCQNGQKIKEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMRELDAAALLKGYFV 389
I FC +N + E+ + ++ LW+LT I+ + D+C +++++
Sbjct: 171 IAFCQKN---LSEYSESNKAIYCLWTLTAIIKEIFKDSCSQKTEILKQF----------- 216
Query: 390 LAGINSITNMNFASLLEQHKQTCK 461
L ++I + + SL QH + C+
Sbjct: 217 LTHFDTIFEVFYNSLFSQHFENCR 240
>AK001445-1|BAA91696.1| 409|Homo sapiens protein ( Homo sapiens
cDNA FLJ10583 fis, clone NT2RP2003629. ).
Length = 409
Score = 29.5 bits (63), Expect = 9.6
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 210 ILFCCQNGQKIKEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMRELDAAALLKGYFV 389
I FC +N + E+ + ++ LW+LT I+ + D+C +++++
Sbjct: 171 IAFCQKN---LSEYSESNKAIYCLWTLTAIIKEIFKDSCSQKTEILKQF----------- 216
Query: 390 LAGINSITNMNFASLLEQHKQTCK 461
L ++I + + SL QH + C+
Sbjct: 217 LTHFDTIFEVFYNSLFSQHFENCR 240
>AF078164-1|AAD31085.1| 288|Homo sapiens Ku70-binding protein
protein.
Length = 288
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 399 INSITNMNFASLLEQHKQTCKKDXGTAMTLVYKKLSWE 512
+N I ++F L+QH QTC +D T L + +S E
Sbjct: 206 VNEIFRLHFG--LKQHHQTCVRDRATLSILAVRNISKE 241
>AB083157-1|BAB93864.1| 757|Homo sapiens WINS1 protein with
Drosophila Lines (Lin) homologous domain protein.
Length = 757
Score = 29.5 bits (63), Expect = 9.6
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 210 ILFCCQNGQKIKEHVQKHQDNKSLWSLTMDIQILMSDTCQTMGDVMRELDAAALLKGYFV 389
I FC +N + E+ + ++ LW+LT I+ + D+C +++++
Sbjct: 171 IAFCQKN---LSEYSESNKAIYCLWTLTAIIKEIFKDSCSQKTEILKQF----------- 216
Query: 390 LAGINSITNMNFASLLEQHKQTCK 461
L ++I + + SL QH + C+
Sbjct: 217 LTHFDTIFEVFYNSLFSQHFENCR 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,681,003
Number of Sequences: 237096
Number of extensions: 1469009
Number of successful extensions: 2847
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2844
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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