Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_O14
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017207-1|AAH17207.1|  492|Homo sapiens GTP binding protein 3 (...    29   9.9  
AY078988-1|AAL85493.1|  492|Homo sapiens GTP-binding protein iso...    29   9.9  
AY078987-1|AAL85492.1|  524|Homo sapiens GTP-binding protein iso...    29   9.9  
AK027606-1|BAB55228.1|  492|Homo sapiens protein ( Homo sapiens ...    29   9.9  
AF361481-1|AAK37568.1|  492|Homo sapiens mitochondrial GTP-bindi...    29   9.9  
AF360742-1|AAK39555.1|  492|Homo sapiens mitochondrial GTP bindi...    29   9.9  

>BC017207-1|AAH17207.1|  492|Homo sapiens GTP binding protein 3
           (mitochondrial) protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 26/103 (25%), Positives = 47/103 (45%)
 Frame = -2

Query: 310 IKRFRSAVNPSNALLLPIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLV 131
           ++R R  +  ++ +L  ++ +D     LA PS+  N          + +PS  +    LV
Sbjct: 319 VRRARERLEQADLILAMLDASD-----LASPSS-CNFLATVVASVGAQSPSDSSQRLLLV 372

Query: 130 ELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLIKKKI 2
             K  L   +   PG D  P+  LS L  +GL+  L  ++K++
Sbjct: 373 LNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKEL 415


>AY078988-1|AAL85493.1|  492|Homo sapiens GTP-binding protein
           isoform V protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 26/103 (25%), Positives = 47/103 (45%)
 Frame = -2

Query: 310 IKRFRSAVNPSNALLLPIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLV 131
           ++R R  +  ++ +L  ++ +D     LA PS+  N          + +PS  +    LV
Sbjct: 319 VRRARERLEQADLILAMLDASD-----LASPSS-CNFLATVVASVGAQSPSDSSQRLLLV 372

Query: 130 ELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLIKKKI 2
             K  L   +   PG D  P+  LS L  +GL+  L  ++K++
Sbjct: 373 LNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKEL 415


>AY078987-1|AAL85492.1|  524|Homo sapiens GTP-binding protein
           isoform IV protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 26/103 (25%), Positives = 47/103 (45%)
 Frame = -2

Query: 310 IKRFRSAVNPSNALLLPIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLV 131
           ++R R  +  ++ +L  ++ +D     LA PS+  N          + +PS  +    LV
Sbjct: 351 VRRARERLEQADLILAMLDASD-----LASPSS-CNFLATVVASVGAQSPSDSSQRLLLV 404

Query: 130 ELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLIKKKI 2
             K  L   +   PG D  P+  LS L  +GL+  L  ++K++
Sbjct: 405 LNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKEL 447


>AK027606-1|BAB55228.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14700 fis, clone NT2RP3000046, weakly similar to
           MITOCHONDRIAL GTPASE MSS1 PRECURSOR. ).
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 26/103 (25%), Positives = 47/103 (45%)
 Frame = -2

Query: 310 IKRFRSAVNPSNALLLPIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLV 131
           ++R R  +  ++ +L  ++ +D     LA PS+  N          + +PS  +    LV
Sbjct: 319 VRRARERLEQADLILAMLDASD-----LASPSS-CNFLATVVASVGAQSPSDSSQRLLLV 372

Query: 130 ELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLIKKKI 2
             K  L   +   PG D  P+  LS L  +GL+  L  ++K++
Sbjct: 373 LNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKEL 415


>AF361481-1|AAK37568.1|  492|Homo sapiens mitochondrial GTP-binding
           protein 1 protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 26/103 (25%), Positives = 47/103 (45%)
 Frame = -2

Query: 310 IKRFRSAVNPSNALLLPIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLV 131
           ++R R  +  ++ +L  ++ +D     LA PS+  N          + +PS  +    LV
Sbjct: 319 VRRARERLEQADLILAMLDASD-----LASPSS-CNFLATVVASVGAQSPSDSSQRLLLV 372

Query: 130 ELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLIKKKI 2
             K  L   +   PG D  P+  LS L  +GL+  L  ++K++
Sbjct: 373 LNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKEL 415


>AF360742-1|AAK39555.1|  492|Homo sapiens mitochondrial GTP binding
           protein 1 protein.
          Length = 492

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 26/103 (25%), Positives = 47/103 (45%)
 Frame = -2

Query: 310 IKRFRSAVNPSNALLLPIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLV 131
           ++R R  +  ++ +L  ++ +D     LA PS+  N          + +PS  +    LV
Sbjct: 319 VRRARERLEQADLILAMLDASD-----LASPSS-CNFLATVVASVGAQSPSDSSQRLLLV 372

Query: 130 ELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLIKKKI 2
             K  L   +   PG D  P+  LS L  +GL+  L  ++K++
Sbjct: 373 LNKSDLLSPEGPGPGPDLPPHLLLSCLTGEGLDGLLEALRKEL 415


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,220,836
Number of Sequences: 237096
Number of extensions: 1606762
Number of successful extensions: 2520
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2520
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)