Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_O14
         (614 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.       47   2e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ...    43   4e-04
BT010287-1|AAQ23605.1|  831|Drosophila melanogaster LD40663p pro...    30   2.9  
AE013599-2854|AAF57580.2|  831|Drosophila melanogaster CG7417-PA...    30   2.9  
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    29   5.0  
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon...    28   8.7  
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ...    28   8.7  

>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
          Length = 1227

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = -1

Query: 512 SLCILNSGSXTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 351
           SL +LN GS T L+      + ID+S+ +PQ+A   SWS   + + SDH+PI I
Sbjct: 163 SLIVLNDGSPTHLSTHN-TFTHIDISLISPQIAHMCSWSISDNLHGSDHFPITI 215



 Score = 31.9 bits (69), Expect = 0.71
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -2

Query: 172 SDAPSSLNLTFTLVELKGVLNHVKDSAPGEDGIPYSFLSHL 50
           S + +SL+  FTL+E++  +   K  +PG D + Y  L +L
Sbjct: 427 SPSATSLDSNFTLLEIENSVAKAKGKSPGADRVSYPMLKNL 467


>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
           protein.
          Length = 1219

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 524 LDMYSLCILNSGSXTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS- 348
           +D   L +LN  S T  +      + IDL++C+P LA    W  L   + SDH+PII + 
Sbjct: 155 IDNMHLILLNDKSPTHFSTHN-TYTHIDLTLCSPILAPHAKWKILNDLHGSDHFPIITTL 213

Query: 347 FP 342
           FP
Sbjct: 214 FP 215


>BT010287-1|AAQ23605.1|  831|Drosophila melanogaster LD40663p
           protein.
          Length = 831

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -2

Query: 220 PSAPLNDPILSYKQYNSDAPSSLNLT 143
           P+AP++ P+  + Q++S AP+S  LT
Sbjct: 660 PAAPISQPVQDFGQHHSSAPTSACLT 685


>AE013599-2854|AAF57580.2|  831|Drosophila melanogaster CG7417-PA
           protein.
          Length = 831

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -2

Query: 220 PSAPLNDPILSYKQYNSDAPSSLNLT 143
           P+AP++ P+  + Q++S AP+S  LT
Sbjct: 660 PAAPISQPVQDFGQHHSSAPTSACLT 685


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 15/118 (12%)
 Frame = -2

Query: 322 IWRNIKRFRSAVNPSNALLLP--------IELADQFLDRLAPPSAPLN---DPILSYKQY 176
           +WR  KRF++   P +A+  P        +E  + F + L     P N   + +    + 
Sbjct: 364 LWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAPESLCRQVEE 423

Query: 175 NSDAPSSLNLTFTLVELKGVLNHVK----DSAPGEDGIPYSFLSHLGEKGLNYFLNLI 14
             ++P  ++L  + V L+ V N +       APGED +    +  L ++ L  FL LI
Sbjct: 424 YLESPFQMSLPLSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQ-FLALI 480


>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
            isoform protein.
          Length = 5322

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -2

Query: 151  NLTFTLVELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLI 14
            NL  T++EL+    H       E+ I Y F S  GE   +Y+ NLI
Sbjct: 2301 NLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLI 2346


>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
            isoform A protein.
          Length = 5322

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -2

Query: 151  NLTFTLVELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLI 14
            NL  T++EL+    H       E+ I Y F S  GE   +Y+ NLI
Sbjct: 2301 NLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLI 2346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,504,197
Number of Sequences: 53049
Number of extensions: 473175
Number of successful extensions: 952
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)