Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_O04
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 260 4e-69
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 253 3e-67
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 244 3e-64
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 141 2e-33
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 6e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 41 0.004
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 41 0.004
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 41 0.004
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 41 0.004
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 41 0.004
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 32 1.9
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 32 1.9
AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B prot... 32 1.9
AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal ... 32 1.9
AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal ... 32 1.9
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 32 1.9
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 32 1.9
AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein. 32 1.9
BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 ... 30 7.8
AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens ... 30 7.8
AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. 30 7.8
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 260 bits (636), Expect = 4e-69
Identities = 128/176 (72%), Positives = 140/176 (79%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQG 183
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 253 bits (620), Expect = 3e-67
Identities = 126/176 (71%), Positives = 138/176 (78%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL+SP GRPG + + G G
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQG 183
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 244 bits (596), Expect = 3e-64
Identities = 123/176 (69%), Positives = 135/176 (76%)
Frame = +2
Query: 80 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 259
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 260 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXXXX 439
P+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 440 XXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGGRPGTCQEEEPPPGTG 607
PSFIVRLDS KHIDFSL SP+ GGRPG + + G G
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQG 183
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 141 bits (341), Expect = 2e-33
Identities = 71/103 (68%), Positives = 77/103 (74%)
Frame = +2
Query: 254 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSXXX 433
+DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKS
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 434 XXXXXXXXXXXXXXXXXXXPSFIVRLDSGKHIDFSLKSPFXGG 562
PSFIVRLDS KHIDFSL+SP+ GG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 6e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +2
Query: 89 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 268
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 269 LFE 277
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = +2
Query: 140 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 319
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 320 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 421
+ L+ + F RRL T + K +A+
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQ 122
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = +2
Query: 140 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 319
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 320 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 421
+ L+ + F RRL T + K +A+
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQ 122
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = +2
Query: 140 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 319
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 320 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 421
+ L+ + F RRL T + K +A+
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQ 122
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = +2
Query: 140 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 319
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 320 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 421
+ L+ + F RRL T + K +A+
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQ 122
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 46/94 (48%)
Frame = +2
Query: 140 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 319
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 320 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 421
+ L+ + F RRL T + K +A+
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQ 122
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 278 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 120
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 119 QKDDEVSRTSLKIPTVL 69
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 278 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 120
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 119 QKDDEVSRTSLKIPTVL 69
KD+ ++ S +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755
>AM231061-1|CAJ76912.1| 1960|Homo sapiens obscurin isoform B protein.
Length = 1960
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 524 HIDFSLKSPFXGGRPGTCQEEEPPPGTGW 610
H S + P GG PGT Q E P P + W
Sbjct: 992 HPQGSKQLPSTGGHPGTAQPERPSPDSPW 1020
>AL670729-4|CAH71670.2| 2582|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 2582
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 524 HIDFSLKSPFXGGRPGTCQEEEPPPGTGW 610
H S + P GG PGT Q E P P + W
Sbjct: 1616 HPQGSKQLPSTGGHPGTAQPERPSPDSPW 1644
>AL353593-4|CAM27610.1| 2582|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 2582
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 524 HIDFSLKSPFXGGRPGTCQEEEPPPGTGW 610
H S + P GG PGT Q E P P + W
Sbjct: 1616 HPQGSKQLPSTGGHPGTAQPERPSPDSPW 1644
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 278 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 120
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 119 QKDDEVSRTSLKIPTVL 69
KD+ ++ S +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 278 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 120
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 119 QKDDEVSRTSLKIPTVL 69
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AB046859-1|BAB13465.2| 2584|Homo sapiens KIAA1639 protein protein.
Length = 2584
Score = 31.9 bits (69), Expect = 1.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 524 HIDFSLKSPFXGGRPGTCQEEEPPPGTGW 610
H S + P GG PGT Q E P P + W
Sbjct: 1616 HPQGSKQLPSTGGHPGTAQPERPSPDSPW 1644
>BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43
protein.
Length = 783
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 376 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPXASCEHPIIYCAPGL 516
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens
cDNA FLJ20315 fis, clone HEP07873. ).
Length = 783
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 376 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPXASCEHPIIYCAPGL 516
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein.
Length = 783
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 376 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPXASCEHPIIYCAPGL 516
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,461,498
Number of Sequences: 237096
Number of extensions: 2001182
Number of successful extensions: 4876
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4865
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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