Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_N23
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   0.78 
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    23   1.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   4.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   9.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   9.6  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 0.78
 Identities = 15/84 (17%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 34  VFHHNHCRFSLPQINCH-FAMTKNSNSQGQQHIRC*CYSTRRDGGCGGRNISLYLVERKE 210
           +++H  C     +I+    +   N  S+ +  +R  C S+RR+G     +++   ++ ++
Sbjct: 15  LYYHQRCSRDWFRISAGCVSRISNRISRNRVLLRGQCISSRRNGRHNVHSLAFGAIQLRQ 74

Query: 211 GSPTARSSRRESAKIVAEHSAAEK 282
                   +R+   I+ E S+ ++
Sbjct: 75  LLKRQLCEKRKEVSIITEDSSRKQ 98


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
          homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 1  WSRFQXLYXCKVFHHNH 51
          ++RFQ L   K FH+NH
Sbjct: 15 YTRFQTLELEKEFHYNH 31


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 163  GCGGRNISLYLVERKE 210
            GC  RN+ LY  E++E
Sbjct: 1007 GCRQRNLDLYRQEKEE 1022


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 128 SAANAIALGAMAVVAVGTFLFTWWK 202
           S  N I LG++  +  G FLF  W+
Sbjct: 287 SQINGI-LGSLVAITGGCFLFRAWE 310


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 109 N*NSWSSQNGNLFVATKNDNDCDGTLCTG 23
           N N+ ++ NGN   A+ N+N+ D    TG
Sbjct: 249 NNNNGANDNGNGNGASNNNNNGDMFCHTG 277


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 156 RWRLWRSEHFSLLGGK 203
           RW L   E   L+GG+
Sbjct: 261 RWNLTSGERVGLVGGR 276


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 168 WRSEHFSLLGG 200
           W SEHF   GG
Sbjct: 333 WNSEHFFEYGG 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,409
Number of Sequences: 438
Number of extensions: 2041
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)