Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_N22
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   1.9  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    22   4.5  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   5.9  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 35  QWXSSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMI 163
           QW +S+   FSK++E L  +  L  H  + + +    +  D I
Sbjct: 417 QWDNSINAGFSKIAENLLEKNWLPVHTSYKSGLNLEQEKKDSI 459


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 61  WFEERRLPLKRQVXVAR 11
           WF+ RR+ LK+++   +
Sbjct: 55  WFQNRRMKLKKELRAVK 71


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 13  VLPGPDASVXVVALQTIFKN 72
           V PG  ++    A++TIFKN
Sbjct: 69  VAPGTSSATNPNAMKTIFKN 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,938
Number of Sequences: 438
Number of extensions: 4077
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)