Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_N20
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 221 3e-59
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 221 4e-59
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 221 4e-59
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 117 7e-28
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 112 3e-26
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 73 3e-14
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 48 5e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 42 5e-05
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 39 3e-04
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 39 3e-04
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 39 4e-04
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.23
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 24 0.81
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 27 0.93
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 1.6
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 26 2.8
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 2.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 2.8
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 5.0
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 8.7
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 24 8.7
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 221 bits (541), Expect = 3e-59
Identities = 106/123 (86%), Positives = 110/123 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 243
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAG 423
DKLKAERERGITIDIALWKFET KY VT+IDAPGHR IKNMITGT S AVLI+ G
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGT-SQADCAVLIIGGG 119
Query: 424 TGE 432
TGE
Sbjct: 120 TGE 122
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 221 bits (540), Expect = 4e-59
Identities = 105/123 (85%), Positives = 110/123 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 243
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAG 423
DKLKAERERGITIDIALWKFET KY VT+IDAPGHR IKNMITGT S A+LI+ G
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGT-SQADCAILIIGGG 119
Query: 424 TGE 432
TGE
Sbjct: 120 TGE 122
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 221 bits (540), Expect = 4e-59
Identities = 105/123 (85%), Positives = 110/123 (89%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 243
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 244 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAG 423
DKLKAERERGITIDIALWKFET KY VT+IDAPGHR IKNMITGT S A+LI+ G
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGT-SQADCAILIIGGG 119
Query: 424 TGE 432
TGE
Sbjct: 120 TGE 122
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 117 bits (282), Expect = 7e-28
Identities = 55/119 (46%), Positives = 78/119 (65%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 255
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 256 AERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAGTGE 432
ERE+G T+++ FET +++DAPGH+ + NMI G I VL++ A GE
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADI-GVLVISARRGE 353
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 112 bits (269), Expect = 3e-26
Identities = 52/112 (46%), Positives = 72/112 (64%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 255
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 256 AERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLI 411
ER RG+T+D+A FE+ K I DAPGHR I MI G S A +++
Sbjct: 235 EERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVV 286
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 72.5 bits (170), Expect = 3e-14
Identities = 45/121 (37%), Positives = 65/121 (53%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 249
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 250 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAGTG 429
E+ RGITI A ++ET+ + +D PGH IKNMITG + + A+++V A G
Sbjct: 94 APEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAAT-MDGAIIVVSATDG 152
Query: 430 E 432
+
Sbjct: 153 Q 153
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 48.4 bits (110), Expect = 5e-07
Identities = 35/114 (30%), Positives = 53/114 (46%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 267
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQ 76
Query: 268 RGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAGTG 429
RGITI+ A F + +ID PGH + +++ L AV I+ G
Sbjct: 77 RGITINSAAISFTWRNQRINLIDTPGHADFTFE-VERSVAVLDGAVAIIDGSAG 129
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 41.5 bits (93), Expect = 5e-05
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 267
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 268 RGITIDI----ALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAGTG 429
RGIT+ ++ + Y + +ID PGH + + +L+ +L+V A G
Sbjct: 104 RGITVKAQTCSMIYYYHGQSYLLNLIDTPGH-VDFRAEVMHSLAACEGCILLVDASQG 160
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 39.1 bits (87), Expect = 3e-04
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 234
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 235 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIV 414
+ L AE D+ + + + V +ID+PGH + +T L A+++V
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGH-VDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 39.1 bits (87), Expect = 3e-04
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYA 234
MGK N+ VI HVD GKST T L+ K G I K +F + A E +G +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKS 72
Query: 235 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRXXIKNMITGTLSGLIAAVLIV 414
+ L AE D+ + + + V +ID+PGH + +T L A+++V
Sbjct: 73 TAI-SLFAEMTDDDMKDMK-EPADGTDFLVNLIDSPGH-VDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 38.7 bits (86), Expect = 4e-04
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 19/133 (14%)
Frame = +1
Query: 88 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 267
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 268 RGITIDIA----LWK---------------FETSKYYVTIIDAPGHRXXIKNMITGTLSG 390
+GITI A W+ FE S Y + IID PGH + L
Sbjct: 111 KGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGH-IDFTIEVERALRV 168
Query: 391 LIAAVLIVXAGTG 429
L AVL++ A +G
Sbjct: 169 LDGAVLVLCAVSG 181
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.23
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 281 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 153
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 23.8 bits (49), Expect(2) = 0.81
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 211 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGH 348
GK + A+ + + GIT I + F+ ++T +D PGH
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGH 230
Score = 22.2 bits (45), Expect(2) = 0.81
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 91 IVVIGHVDSGKST 129
+ ++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 27.5 bits (58), Expect = 0.93
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 422 PAXTMSTAAISPERVPVIMFLMXXLCPGASMMVT*YLLVSNFQRAISI 279
P+ ++ IS + +++L+ LC GAS+ T LL + IS+
Sbjct: 319 PSRSIPKGTISSQATTFLLYLLVILCVGASVTRTGLLLDMDVMEHISL 366
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 1.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 305 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 174
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 2.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 319 YVTIIDAPGHRXXIKNMITGTLSGLIAAVLIVXAG 423
+V+ +D PGH + M+ G + ++ A L++ AG
Sbjct: 109 HVSFVDCPGHDILMATMLNG--AAVMDAALLLIAG 141
Score = 25.0 bits (52), Expect = 5.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 58 PKMGKEKTHINIVVIGHVDSGKST 129
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 2.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 250 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSNDQWWWT 122
V +PK I I++ F P S S C+Y S+D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 2.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 271 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 173
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 5.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 205 PGPPSRTSRWYVCQYHHIC 149
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 8.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 91 IVVIGHVDSGKSTTTGHLIYKC 156
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 8.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 94 VVIGHVDSGKSTTTGHLIYKCG 159
+V+GH GK+T +Y+ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,576,222
Number of Sequences: 5004
Number of extensions: 28662
Number of successful extensions: 98
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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