Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_N19
         (391 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351...    30   0.75 
02_05_1350 - 35850020-35850073,35850430-35850519,35850963-358509...    27   4.0  
06_03_0778 - 24523780-24526353                                         27   7.0  
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289...    27   7.0  

>12_01_0445 -
           3513733-3513819,3514392-3514613,3514730-3514999,
           3515033-3517110,3517649-3517976,3519136-3519255,
           3519299-3519352,3520115-3520154,3520344-3520411
          Length = 1088

 Score = 29.9 bits (64), Expect = 0.75
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +1

Query: 253 VSYVHLKQQADREKMHEGVVRDME-RQQKRKIENXYL-LEKQNELTK 387
           V  +HL Q+   EK+H+ V +  E   +  K++N    L+KQ E TK
Sbjct: 258 VRQLHLAQEDQAEKVHDVVTKSQELESENSKLQNRITELKKQLETTK 304


>02_05_1350 -
           35850020-35850073,35850430-35850519,35850963-35850987,
           35851390-35851430,35852089-35852108,35852999-35853113,
           35853114-35853259,35853535-35853586
          Length = 180

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 323 SISLTTPSCIFSLSACCFR*TYDTIPIVIEQERPKTNLELEEDIR 189
           +I++  PS IFS+  C F        +VIE  R K     + +IR
Sbjct: 93  TITVNHPSYIFSVFVCMFEQQRKDFEVVIEDGRSKNMYVGQREIR 137


>06_03_0778 - 24523780-24526353
          Length = 857

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 343 SFSFVAVPYLSLLLHASFPCRLAVLDEHMT 254
           SFSFV +  ++LLLH S  C L V  E++T
Sbjct: 3   SFSFVPLLLIALLLHQS-SCLLQVEAENLT 31


>03_01_0372 +
           2895807-2895883,2896557-2896647,2896741-2896839,
           2897220-2897268,2897269-2897405,2898027-2898248,
           2898335-2898488,2898574-2898723,2898890-2898978,
           2899632-2899844,2900180-2900314,2900461-2900640,
           2901004-2901111,2901215-2901340,2901421-2901550,
           2901637-2901729,2902067-2902192,2902294-2902304
          Length = 729

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
 Frame = +1

Query: 250 IVSYVHLKQQADREKMHEGV-------VRDMERQQKRKIENXYLLEKQ 372
           IV+ + +K++ D E +++ V         +MERQQK K      LEK+
Sbjct: 360 IVNTIRIKEEVDYESLYKKVEHEVDHLTSEMERQQKLKNSEKMQLEKK 407


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,553,293
Number of Sequences: 37544
Number of extensions: 115332
Number of successful extensions: 268
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)