Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_N19
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.23 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   2.2  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   2.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   6.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   6.6  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   6.6  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   6.6  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    20   8.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   8.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = +1

Query: 238 ITIGIVSYVHLKQQADREKMHEGVVRDMERQQKRKIENXYLLEKQ 372
           + + ++   HL Q AD++K     ++ +  QQ+R I+   + + Q
Sbjct: 153 LQLNVIQQTHLLQTADKKKA-SAPLQQLALQQQRLIQQLQITQSQ 196


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 39  HYKNNHKLNYSKMLSSKN 92
           +Y NN+  NY+K L  KN
Sbjct: 332 NYNNNNYNNYNKKLYYKN 349


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y+     +Y NN+  NY K+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKL 108


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y+     +Y NN+  NY K+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKL 108


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y+     +Y NN+  NY K+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKL 108


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y+     +Y NN+  NY K+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKL 108


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y+     +Y NN+  NY K+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKL 108


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y+     +Y NN+  NY K+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKL 108


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y+     +Y NN+  NY K+
Sbjct: 89  YKYSNYNNYNNNYNTNYKKL 108


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y      +Y NN+  NY K+
Sbjct: 97  YNNNYNNNYNNNYNNNYKKL 116


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 18  YQXXXXXHYKNNHKLNYSKM 77
           Y      +Y NN+  NY K+
Sbjct: 97  YNNNYNNNYNNNYNNNYKKL 116


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 39  HYKNNHKLNYSKM 77
           +Y NN+  NY K+
Sbjct: 100 NYNNNYNTNYKKL 112


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 39  HYKNNHKLNYSKMLSSKN 92
           H  NN+K NY+   +  N
Sbjct: 91  HNNNNYKYNYNNKYNYNN 108


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 39  HYKNNHKLNYSKMLSSKN 92
           +Y NN+  NY K+  + N
Sbjct: 339 NYNNNYNNNYKKLYYNIN 356


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 17  ISIDNHNTLQK*PQI 61
           + +DNH+T +  PQI
Sbjct: 303 VFVDNHDTQRDNPQI 317


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,727
Number of Sequences: 438
Number of extensions: 1708
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)