Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_N18
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 199 4e-51
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 199 4e-51
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 199 4e-51
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 197 2e-50
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 190 3e-48
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 111 2e-24
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 111 2e-24
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 46 6e-05
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 31 3.3
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVG 144
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 199 bits (486), Expect = 4e-51
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 197 bits (481), Expect = 2e-50
Identities = 86/142 (60%), Positives = 110/142 (77%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 190 bits (462), Expect = 3e-48
Identities = 83/142 (58%), Positives = 108/142 (76%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 222 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVG 146
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 111 bits (266), Expect = 2e-24
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 216 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 395
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 396 XXXXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVG 85
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 111 bits (266), Expect = 2e-24
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 216 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 395
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 396 XXXXFCLKPGRNYCHVGRLSHEIG 467
LKP R + ++GRL+HE+G
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVG 85
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 46.4 bits (105), Expect = 6e-05
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 288 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEI 464
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEV 59
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 79 AVWRQSSPRSFSKGTKLLWFAANKSISLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 249
+ WRQS PR + +G + L A ++ +L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,513,132
Number of Sequences: 237096
Number of extensions: 1747055
Number of successful extensions: 6897
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6897
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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