Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_N17
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 109 8e-24
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 109 8e-24
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 109 8e-24
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 109 8e-24
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 109 8e-24
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 109 8e-24
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 109 8e-24
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 109 8e-24
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 108 2e-23
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 108 2e-23
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 108 2e-23
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 108 2e-23
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 108 2e-23
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 108 2e-23
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 108 2e-23
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 104 2e-22
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 104 2e-22
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 104 2e-22
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 101 3e-21
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 101 3e-21
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 100 4e-21
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 100 4e-21
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 83 6e-16
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 75 2e-13
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 75 2e-13
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 67 4e-11
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 67 4e-11
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 67 4e-11
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 67 4e-11
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 67 4e-11
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 67 4e-11
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 67 4e-11
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 67 4e-11
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 67 4e-11
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 67 4e-11
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 67 4e-11
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 67 4e-11
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 66 1e-10
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 66 1e-10
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 66 1e-10
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 66 1e-10
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 66 1e-10
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 66 1e-10
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 66 1e-10
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 66 1e-10
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 64 3e-10
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 64 3e-10
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 64 3e-10
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 64 3e-10
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 64 3e-10
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 64 3e-10
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 64 3e-10
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 64 3e-10
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 64 3e-10
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 62 1e-09
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 62 2e-09
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 60 5e-09
X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein. 53 1e-06
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 53 1e-06
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 53 1e-06
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 53 1e-06
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 53 1e-06
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 53 1e-06
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 53 1e-06
X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein. 52 2e-06
D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein. 52 2e-06
BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein. 52 2e-06
BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, sing... 52 2e-06
BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, sing... 52 2e-06
BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, sing... 52 2e-06
AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif singl... 52 2e-06
AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein pro... 52 2e-06
AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein. 52 2e-06
D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein. 52 2e-06
BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, sing... 52 2e-06
BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, sing... 52 2e-06
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 52 2e-06
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 52 2e-06
BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein. 51 3e-06
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 51 4e-06
D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein. 50 5e-06
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 50 7e-06
AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif singl... 50 7e-06
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 50 7e-06
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 50 7e-06
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 50 7e-06
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 50 7e-06
AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar t... 50 1e-05
AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar t... 50 1e-05
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 49 1e-05
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 49 1e-05
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 49 1e-05
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 49 2e-05
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 49 2e-05
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 49 2e-05
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 49 2e-05
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 49 2e-05
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 49 2e-05
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 49 2e-05
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 49 2e-05
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 48 4e-05
D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein. 48 4e-05
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 48 4e-05
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 48 4e-05
BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma... 48 4e-05
BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma... 48 4e-05
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 48 4e-05
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 48 4e-05
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 48 4e-05
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 48 4e-05
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 48 4e-05
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 48 4e-05
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 48 4e-05
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 48 4e-05
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 48 4e-05
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 48 4e-05
AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma... 48 4e-05
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 47 7e-05
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 46 9e-05
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 46 9e-05
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 46 9e-05
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 46 9e-05
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 46 9e-05
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 46 9e-05
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 46 9e-05
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 46 9e-05
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 46 9e-05
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 46 9e-05
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 46 9e-05
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 46 9e-05
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 46 9e-05
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 46 9e-05
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 46 9e-05
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 46 9e-05
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 46 9e-05
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 46 9e-05
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 46 1e-04
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 46 1e-04
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 46 1e-04
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 46 1e-04
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 46 1e-04
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 46 1e-04
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 46 1e-04
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 46 1e-04
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 46 1e-04
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 46 1e-04
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 46 1e-04
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 45 2e-04
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 45 2e-04
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 45 2e-04
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 45 2e-04
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 43 0.001
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 43 0.001
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 43 0.001
X16105-1|CAA34231.1| 325|Homo sapiens protein ( Human mRNA for ... 43 0.001
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 43 0.001
L03411-1|AAC37523.1| 380|Homo sapiens RD protein protein. 43 0.001
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 43 0.001
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 43 0.001
BX005143-9|CAM25865.1| 380|Homo sapiens RD RNA binding protein ... 43 0.001
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 43 0.001
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 43 0.001
BC050617-1|AAH50617.1| 380|Homo sapiens RD RNA binding protein ... 43 0.001
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 43 0.001
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 43 0.001
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 43 0.001
BC025235-1|AAH25235.1| 380|Homo sapiens RD RNA binding protein ... 43 0.001
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 43 0.001
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 43 0.001
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 43 0.001
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 43 0.001
AL844853-14|CAI41862.1| 333|Homo sapiens RD RNA binding protein... 43 0.001
AL844853-13|CAI41861.1| 380|Homo sapiens RD RNA binding protein... 43 0.001
AL662849-7|CAI17457.1| 380|Homo sapiens RD RNA binding protein ... 43 0.001
AL645922-8|CAI41728.1| 380|Homo sapiens RD RNA binding protein ... 43 0.001
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 43 0.001
AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated... 43 0.001
AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated... 43 0.001
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 43 0.001
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 43 0.001
AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated ... 43 0.001
AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated ... 43 0.001
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 43 0.001
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 43 0.001
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 43 0.001
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 43 0.001
AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor transc... 43 0.001
AF019413-7|AAB67979.1| 380|Homo sapiens RD protein. 43 0.001
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 42 0.001
BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein. 42 0.001
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 42 0.001
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 42 0.001
AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic granule-... 42 0.001
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 42 0.002
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 42 0.003
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 42 0.003
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 42 0.003
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 42 0.003
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 42 0.003
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 42 0.003
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 42 0.003
BX005143-10|CAM25866.1| 334|Homo sapiens RD RNA binding protein... 41 0.003
AL662849-8|CAM24860.1| 334|Homo sapiens RD RNA binding protein ... 41 0.003
AL645922-9|CAM25396.1| 334|Homo sapiens RD RNA binding protein ... 41 0.003
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 41 0.004
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 41 0.004
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 41 0.004
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 41 0.004
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 41 0.004
BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein. 41 0.004
AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif prote... 41 0.004
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 41 0.004
AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator p... 41 0.004
AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator p... 41 0.004
AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein... 41 0.004
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 41 0.004
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 40 0.006
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 40 0.006
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 40 0.006
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 40 0.008
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 40 0.008
M33231-1|AAA36308.1| 382|Homo sapiens protein ( Human MHC class... 40 0.010
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 40 0.010
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 40 0.010
Z97632-6|CAI42404.1| 244|Homo sapiens HIV-1 Tat specific factor... 39 0.014
Z97632-5|CAI42403.1| 223|Homo sapiens HIV-1 Tat specific factor... 39 0.014
Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor... 39 0.014
U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein. 39 0.014
L38696-1|AAC28898.1| 291|Homo sapiens autoantigen p542 protein. 39 0.014
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 39 0.014
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 39 0.014
BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor... 39 0.014
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 39 0.014
BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein, au... 39 0.014
BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein, au... 39 0.014
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 39 0.014
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 39 0.014
BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific fact... 39 0.014
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 39 0.014
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 39 0.014
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 39 0.014
AL031668-6|CAB43742.1| 290|Homo sapiens RNA binding protein, au... 39 0.014
AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein, au... 39 0.014
AL031668-4|CAI22149.1| 237|Homo sapiens RNA binding protein, au... 39 0.014
AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein, au... 39 0.014
AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein (au... 39 0.014
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 39 0.014
AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear r... 39 0.014
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 39 0.014
AB209303-1|BAD92540.1| 758|Homo sapiens HIV TAT specific factor... 39 0.014
AB046799-1|BAB13405.1| 704|Homo sapiens KIAA1579 protein protein. 39 0.014
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 39 0.018
BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 39 0.018
BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 39 0.018
BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 39 0.018
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 39 0.018
BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein MG... 39 0.018
BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 39 0.018
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 39 0.018
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 39 0.018
AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 39 0.018
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 39 0.018
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 39 0.018
AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 39 0.018
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 39 0.018
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 39 0.018
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 39 0.018
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 39 0.018
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 38 0.024
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 38 0.024
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 38 0.024
BC037428-1|AAH37428.1| 606|Homo sapiens RAVER1 protein protein. 38 0.024
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 38 0.024
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 38 0.024
BC002696-1|AAH02696.1| 207|Homo sapiens HNRPCL1 protein protein. 38 0.024
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 38 0.024
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 38 0.024
AL022101-6|CAA17879.1| 293|Homo sapiens heterogeneous nuclear r... 38 0.024
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 38 0.024
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 38 0.024
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 38 0.031
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 38 0.031
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 38 0.031
AL031668-1|CAI22146.1| 89|Homo sapiens RNA binding protein, au... 38 0.031
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 37 0.055
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 37 0.055
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 37 0.055
BC031090-1|AAH31090.1| 291|Homo sapiens RALYL protein protein. 37 0.055
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 37 0.055
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 37 0.055
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 37 0.055
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 37 0.055
AF495530-1|AAO85517.1| 291|Homo sapiens RALY-like protein isofo... 37 0.055
AF495529-1|AAO85516.1| 291|Homo sapiens RALY-like protein isofo... 37 0.055
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 37 0.055
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 37 0.055
AB075858-1|BAB85564.1| 384|Homo sapiens KIAA1978 protein protein. 37 0.055
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 37 0.072
BC070071-1|AAH70071.1| 1271|Homo sapiens RBM16 protein protein. 37 0.072
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 37 0.072
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 37 0.072
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 37 0.072
AL591499-2|CAH70694.1| 1271|Homo sapiens RNA binding motif prote... 37 0.072
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 37 0.072
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 37 0.072
AL136976-1|CAI21482.1| 1271|Homo sapiens RNA binding motif prote... 37 0.072
AL121952-2|CAI21474.1| 1271|Homo sapiens RNA binding motif prote... 37 0.072
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 37 0.072
AB029039-1|BAA83068.2| 1330|Homo sapiens KIAA1116 protein protein. 37 0.072
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 36 0.095
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 36 0.095
D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein. 36 0.095
D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein. 36 0.095
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 36 0.095
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 36 0.095
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 36 0.095
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 36 0.095
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 36 0.095
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 36 0.095
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 36 0.13
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 36 0.13
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 36 0.13
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 36 0.13
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 36 0.13
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 36 0.13
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.13
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.13
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 36 0.13
BC013115-1|AAH13115.1| 358|Homo sapiens RBM9 protein protein. 36 0.13
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 36 0.13
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 36 0.13
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 36 0.13
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 36 0.13
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 36 0.13
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 36 0.13
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 36 0.13
AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens ... 36 0.13
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 36 0.13
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 36 0.13
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 36 0.13
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 36 0.13
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 36 0.13
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.13
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 36 0.13
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 36 0.13
BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein. 36 0.17
BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein. 36 0.17
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 36 0.17
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 36 0.17
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 36 0.17
AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein pro... 36 0.17
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 35 0.22
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 35 0.22
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 35 0.22
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 35 0.22
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 35 0.22
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 35 0.22
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 35 0.22
AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens ... 35 0.22
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 35 0.22
X16135-1|CAA34261.1| 558|Homo sapiens protein ( Human mRNA for ... 35 0.29
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 35 0.29
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 35 0.29
BC069184-1|AAH69184.1| 558|Homo sapiens HNRPL protein protein. 35 0.29
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 35 0.29
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 35 0.29
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 35 0.29
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 35 0.29
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 35 0.29
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 35 0.29
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 35 0.29
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 35 0.29
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 35 0.29
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 35 0.29
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 35 0.29
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 35 0.29
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 35 0.29
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 35 0.29
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 35 0.29
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 35 0.29
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 35 0.29
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 35 0.29
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 35 0.29
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 35 0.29
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 35 0.29
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 35 0.29
AB044547-1|BAB18649.1| 589|Homo sapiens heterogeneous nuclear r... 35 0.29
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 35 0.29
BC092476-1|AAH92476.1| 219|Homo sapiens RNA binding protein wit... 34 0.39
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 34 0.39
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 34 0.39
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 34 0.39
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 34 0.39
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 34 0.39
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 34 0.39
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 34 0.39
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 34 0.39
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 34 0.51
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 34 0.51
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 34 0.51
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 34 0.51
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 34 0.51
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 34 0.51
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 34 0.51
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 34 0.51
BC126436-1|AAI26437.1| 970|Homo sapiens GEM interacting protein... 34 0.51
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 34 0.51
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 34 0.51
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 34 0.51
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 34 0.51
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 34 0.51
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 34 0.51
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 34 0.51
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 34 0.51
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 34 0.51
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 34 0.51
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 34 0.51
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 34 0.51
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 34 0.51
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 34 0.51
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 34 0.51
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 34 0.51
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 34 0.51
AF132541-1|AAF61330.1| 970|Homo sapiens Gem-interacting protein... 34 0.51
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 34 0.51
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 34 0.51
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 34 0.51
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 34 0.51
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 34 0.51
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 34 0.51
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 34 0.51
D84110-1|BAA12228.1| 196|Homo sapiens RBP-MS/type 4 protein. 33 0.67
D84109-1|BAA12227.1| 219|Homo sapiens RBP-MS/type 3 protein. 33 0.67
D84108-1|BAA12226.1| 204|Homo sapiens RBP-MS/type 2 protein. 33 0.67
D84107-1|BAA12225.1| 196|Homo sapiens RBP-MS/type 1 protein. 33 0.67
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 33 0.67
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 33 0.67
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 33 0.67
BC003608-1|AAH03608.1| 219|Homo sapiens RNA binding protein wit... 33 0.67
AL450998-13|CAH70861.1| 373|Homo sapiens SMART/HDAC1 associated... 33 0.67
AL034555-5|CAI19527.1| 373|Homo sapiens SMART/HDAC1 associated ... 33 0.67
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 33 0.67
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 33 0.67
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 33 0.67
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 33 0.89
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 33 0.89
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 33 0.89
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 33 0.89
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 33 0.89
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 33 0.89
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 33 0.89
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 33 0.89
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC017480-1|AAH17480.1| 542|Homo sapiens heterogeneous nuclear r... 33 0.89
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC008217-1|AAH08217.2| 275|Homo sapiens HNRPLL protein protein. 33 0.89
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 33 0.89
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 33 0.89
AY236963-1|AAQ20084.2| 537|Homo sapiens stromal RNA regulating ... 33 0.89
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 33 0.89
AK130003-1|BAC85272.1| 307|Homo sapiens protein ( Homo sapiens ... 33 0.89
AF461722-1|AAN76189.1| 537|Homo sapiens BLOCK24 variant protein. 33 0.89
AF461716-1|AAN76190.1| 262|Homo sapiens BLOCK24 variant protein. 33 0.89
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 33 0.89
AC011247-1|AAY24302.1| 542|Homo sapiens unknown protein. 33 0.89
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 33 0.89
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 33 1.2
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 33 1.2
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 33 1.2
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 33 1.2
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 33 1.2
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 33 1.2
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 33 1.2
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 33 1.2
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 33 1.2
BC006832-1|AAH06832.1| 344|Homo sapiens splicing factor, argini... 33 1.2
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 33 1.2
BC000680-1|AAH00680.1| 287|Homo sapiens tRNA selenocysteine ass... 33 1.2
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 33 1.2
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 33 1.2
AL513497-3|CAI22288.1| 287|Homo sapiens tRNA selenocysteine ass... 33 1.2
AL031681-3|CAB43960.1| 344|Homo sapiens splicing factor, argini... 33 1.2
AK000510-1|BAA91217.1| 287|Homo sapiens protein ( Homo sapiens ... 33 1.2
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 15 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 74
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 75 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 128
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 129 VSGLPKTMTQKELEQLFSQYGRIITSRI 156
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 211
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
P T +++ NL PD L +F PFG +TN +V + +
Sbjct: 259 PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 298
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 15 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 74
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 75 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 128
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 129 VSGLPKTMTQKELEQLFSQYGRIITSRI 156
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 211
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
P T +++ NL PD L +F PFG +TN +V + +
Sbjct: 272 PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 311
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 15 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 74
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 75 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 128
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 129 VSGLPKTMTQKELEQLFSQYGRIITSRI 156
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 211
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 278 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 337
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
P T +++ NL PD L +F PFG +TN +V + +
Sbjct: 259 PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 298
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 43 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 102
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 103 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 156
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 157 VSGLPKTMTQKELEQLFSQYGRIITSRI 184
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 146 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 205
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K +
Sbjct: 206 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 239
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 319 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 378
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
P T +++ NL PD L +F PFG +TN +V + +
Sbjct: 300 PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 339
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 15 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 74
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 75 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 128
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 129 VSGLPKTMTQKELEQLFSQYGRIITSRI 156
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNG 413
+AE+A NG
Sbjct: 178 EAEEAIKGLNG 188
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 15 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 74
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 75 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 128
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 129 VSGLPKTMTQKELEQLFSQYGRIITSRI 156
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 211
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 291 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 350
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
P T +++ NL PD L +F PFG +TN +V + +
Sbjct: 272 PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 311
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 15 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 74
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 75 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 128
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 129 VSGLPKTMTQKELEQLFSQYGRIITSRI 156
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K +
Sbjct: 178 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 211
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 278 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 337
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
P T +++ NL PD L +F PFG +TN +V + +
Sbjct: 259 PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 298
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 109 bits (262), Expect = 8e-24
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
+N T+ N+ + NT S T L+VNY+P+ MT++ + +LF ++G+IESCKL+ ++
Sbjct: 23 ANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDK 82
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 83 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 136
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 137 VSGLPKTMTQKELEQLFSQYGRIITSRI 164
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 126 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRI 185
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K +
Sbjct: 186 EAEEAIKGLNGQKPPGATEPITVKFANNPSQKTN 219
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 299 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 358
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
P T +++ NL PD L +F PFG +TN +V + +
Sbjct: 280 PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDF 319
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 312 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 371
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA------NRGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ +RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVGQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A + NG + + L+VS
Sbjct: 298 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAITSLNGYRLGDRVLQVS 357
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 312 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 371
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 298 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 357
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 42 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 98
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 99 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 152
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 153 VSGLPKTMTQKELEQLFSQYGRIITSRI 180
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 235
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 315 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 374
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 298 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 357
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 30 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 86
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 87 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 140
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 141 VSGLPKTMTQKELEQLFSQYGRIITSRI 168
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 223
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 317 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 376
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 30 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 86
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 87 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 140
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 141 VSGLPKTMTQKELEQLFSQYGRIITSRI 168
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 223
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 303 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 362
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 312 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 371
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 298 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 357
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 42 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 98
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 99 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 152
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 153 VSGLPKTMTQKELEQLFSQYGRIITSRI 180
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 235
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 315 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 374
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 298 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 357
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 30 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 86
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 87 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 140
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 141 VSGLPKTMTQKELEQLFSQYGRIITSRI 168
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 223
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 317 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 376
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 30 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 86
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 87 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 140
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 141 VSGLPKTMTQKELEQLFSQYGRIITSRI 168
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 130 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 189
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 190 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 223
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 303 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 362
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 312 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 371
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 298 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 357
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 42 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 98
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 99 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 152
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 153 VSGLPKTMTQKELEQLFSQYGRIITSRI 180
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 142 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 201
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 202 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 235
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 315 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 374
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 108 bits (259), Expect = 2e-23
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S+N R + M+ G A T+ S T L+VNY+P+ MT++ +LF ++G+IESCKL+ ++
Sbjct: 25 SSNNRNCPSPMQTG---ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDK 81
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV Y +DAEKA NGL +Q KT+KVS A + S ++NLY
Sbjct: 82 ITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA------RPSSASIRDANLY 135
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
+S LP MT + L LFS +G I SR+
Sbjct: 136 VSGLPKTMTQKELEQLFSQYGRIITSRI 163
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ MT+ + LFS G+I + +++ + RG GF+ ++K
Sbjct: 125 SSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 184
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENKVS 479
+AE+A NG G T ++ NP K S
Sbjct: 185 EAEEAIKGLNGQKPSGATEPITVKFANNPSQKSS 218
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ LF G + + K+I + +G+GFV +++A A A+ NG + + L+VS
Sbjct: 298 VLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVS 357
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 104 bits (250), Expect = 2e-22
Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 6/132 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D ++ T L+VNY+P+ MT+D + +LFS++G++ES KLI ++ GYGFV Y
Sbjct: 12 DCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTL 557
+DAE+A NGL +Q KT+KVS A P ++V ++NLYIS LP MT + + +
Sbjct: 72 KDAERAINTLNGLRLQSKTIKVSYA--RPSSEVI----KDANLYISGLPRTMTQKDVEDM 125
Query: 558 FSPFGNITNSRV 593
FS FG I NSRV
Sbjct: 126 FSRFGRIINSRV 137
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = +3
Query: 231 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEK 392
+ L ++ +P MT+ + +FS G+I + +++ + RG F+ ++K +AE+
Sbjct: 103 IKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEE 162
Query: 393 ARAAFNG 413
A +FNG
Sbjct: 163 AITSFNG 169
Score = 33.5 bits (73), Expect = 0.67
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +E+A A A+ NG + K L+VS
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 104 bits (250), Expect = 2e-22
Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 6/132 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D ++ T L+VNY+P+ MT+D + +LFS++G++ES KLI ++ GYGFV Y
Sbjct: 12 DCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTL 557
+DAE+A NGL +Q KT+KVS A P ++V ++NLYIS LP MT + + +
Sbjct: 72 KDAERAINTLNGLRLQSKTIKVSYA--RPSSEVI----KDANLYISGLPRTMTQKDVEDM 125
Query: 558 FSPFGNITNSRV 593
FS FG I NSRV
Sbjct: 126 FSRFGRIINSRV 137
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = +3
Query: 231 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEK 392
+ L ++ +P MT+ + +FS G+I + +++ + RG F+ ++K +AE+
Sbjct: 103 IKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEE 162
Query: 393 ARAAFNG 413
A +FNG
Sbjct: 163 AITSFNG 169
Score = 33.5 bits (73), Expect = 0.67
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +E+A A A+ NG + K L+VS
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 104 bits (250), Expect = 2e-22
Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 6/132 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D ++ T L+VNY+P+ MT+D + +LFS++G++ES KLI ++ GYGFV Y
Sbjct: 12 DCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTA 71
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTL 557
+DAE+A NGL +Q KT+KVS A P ++V ++NLYIS LP MT + + +
Sbjct: 72 KDAERAINTLNGLRLQSKTIKVSYA--RPSSEVI----KDANLYISGLPRTMTQKDVEDM 125
Query: 558 FSPFGNITNSRV 593
FS FG I NSRV
Sbjct: 126 FSRFGRIINSRV 137
Score = 37.9 bits (84), Expect = 0.031
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Frame = +3
Query: 231 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEK 392
+ L ++ +P MT+ + +FS G+I + +++ + RG F+ ++K +AE+
Sbjct: 103 IKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEE 162
Query: 393 ARAAFNG 413
A +FNG
Sbjct: 163 AITSFNG 169
Score = 33.5 bits (73), Expect = 0.67
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
+++ +F G + + K+I + +G+GFV +E+A A A+ NG + K L+VS
Sbjct: 259 ILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVS 318
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 101 bits (241), Expect = 3e-21
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Frame = +3
Query: 210 GGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYE 371
G + T+ S T L+VNY+P+ MT+D +LF ++G IESCKL+ ++ GYGFV Y
Sbjct: 20 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 79
Query: 372 KHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLN 551
DA+KA NGL +Q KT+KVS A + S ++NLY+S LP M+ + +
Sbjct: 80 DPNDADKAINTLNGLKLQTKTIKVSYA------RPSSASIRDANLYVSGLPKTMSQKEME 133
Query: 552 TLFSPFGNITNSRV 593
LFS +G I SR+
Sbjct: 134 QLFSQYGRIITSRI 147
Score = 39.1 bits (87), Expect = 0.014
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ M++ M LFS G+I + +++ + RG GF+ ++K
Sbjct: 109 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 168
Query: 381 DAEKARAAFNG 413
+AE+A NG
Sbjct: 169 EAEEAIKGLNG 179
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +3
Query: 255 NYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGL 416
N PE + +++ LF G + + K+I + +G+GF+ +++A A A+ NG
Sbjct: 273 NLSPE-PDQSVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFMTMTNYDEAAMAIASLNGY 331
Query: 417 LMQGKTLKVS 446
+ + L+VS
Sbjct: 332 RLGQRVLQVS 341
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 101 bits (241), Expect = 3e-21
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Frame = +3
Query: 210 GGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYE 371
G + T+ S T L+VNY+P+ MT+D +LF ++G IESCKL+ ++ GYGFV Y
Sbjct: 29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88
Query: 372 KHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLN 551
DA+KA NGL +Q KT+KVS A + S ++NLY+S LP M+ + +
Sbjct: 89 DPNDADKAINTLNGLKLQTKTIKVSYA------RPSSASIRDANLYVSGLPKTMSQKEME 142
Query: 552 TLFSPFGNITNSRV 593
LFS +G I SR+
Sbjct: 143 QLFSQYGRIITSRI 156
Score = 39.5 bits (88), Expect = 0.010
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ M++ M LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENK 473
+AE+A NG G ++ NP K
Sbjct: 178 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQK 209
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 255 NYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGL 416
N PE +++ LF G + + K+I + +G+GFV +++A A A+ NG
Sbjct: 290 NLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGY 348
Query: 417 LMQGKTLKVS 446
+ + L+VS
Sbjct: 349 RLGERVLQVS 358
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 100 bits (240), Expect = 4e-21
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Frame = +3
Query: 210 GGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYE 371
G + T+ S T L+VNY+P+ MT+D +LF ++G IESCKL+ ++ GYGFV Y
Sbjct: 29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYP 88
Query: 372 KHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLN 551
DA+KA NGL +Q KT+KVS A + S ++NLY+S LP M+ + +
Sbjct: 89 DPNDADKAINTLNGLKLQTKTIKVSYA------RPSSASIRDANLYVSGLPKTMSQKEME 142
Query: 552 TLFSPFGNITNSRV 593
LFS +G I SR+
Sbjct: 143 QLFSQYGRIITSRI 156
Score = 39.5 bits (88), Expect = 0.010
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ M++ M LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENK 473
+AE+A NG G ++ NP K
Sbjct: 178 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQK 209
Score = 33.1 bits (72), Expect = 0.89
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 255 NYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGL 416
N PE +++ LF G + + K+I + +G+GFV +++A A A+ NG
Sbjct: 282 NLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGY 340
Query: 417 LMQGKTLKVS 446
+ + L+VS
Sbjct: 341 RLAERVLQVS 350
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 100 bits (240), Expect = 4e-21
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Frame = +3
Query: 210 GGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYE 371
G + T+ S T L+VNY+P+ MT+D +LF ++G IESCKL+ ++ GYGFV Y
Sbjct: 29 GTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYP 88
Query: 372 KHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLN 551
DA+KA NGL +Q KT+KVS A + S ++NLY+S LP M+ + +
Sbjct: 89 DPNDADKAINTLNGLKLQTKTIKVSYA------RPSSASIRDANLYVSGLPKTMSQKEME 142
Query: 552 TLFSPFGNITNSRV 593
LFS +G I SR+
Sbjct: 143 QLFSQYGRIITSRI 156
Score = 39.5 bits (88), Expect = 0.010
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ M++ M LFS G+I + +++ + RG GF+ ++K
Sbjct: 118 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 177
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENK 473
+AE+A NG G ++ NP K
Sbjct: 178 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQK 209
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 255 NYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGL 416
N PE +++ LF G + + K+I + +G+GFV +++A A A+ NG
Sbjct: 283 NLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGY 341
Query: 417 LMQGKTLKVS 446
+ + L+VS
Sbjct: 342 RLGERVLQVS 351
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 83.4 bits (197), Expect = 6e-16
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
MT+D +LF ++G IESCKL+ ++ GYGFV Y DA+KA NGL +Q KT
Sbjct: 1 MTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKT 60
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+KVS A + S ++NLY+S LP M+ + + LFS +G I SR+
Sbjct: 61 IKVSYA------RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRI 107
Score = 39.5 bits (88), Expect = 0.010
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
++ ++ L V+ +P+ M++ M LFS G+I + +++ + RG GF+ ++K
Sbjct: 69 SSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRI 128
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALL-NPENK 473
+AE+A NG G ++ NP K
Sbjct: 129 EAEEAIKGLNGQKPLGAAEPITVKFANNPSQK 160
Score = 32.7 bits (71), Expect = 1.2
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = +3
Query: 255 NYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGL 416
N PE +++ LF G + + K+I + +G+GFV +++A A A+ NG
Sbjct: 241 NLSPEA-DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGY 299
Query: 417 LMQGKTLKVS 446
+ + L+VS
Sbjct: 300 RLGERVLQVS 309
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 75.4 bits (177), Expect = 2e-13
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAA 404
P L V + +T ++ LFS +G +SCK+I +N Y FVE+ +H DA A AA
Sbjct: 8 PRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAA 67
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES--NLYISNLPPDMTLERLNTLFSPFGNI 578
NG + GK +KV+ A P S K DT + ++++ +L P++T E + + F+PFG I
Sbjct: 68 MNGRKILGKEVKVNWA-TTPS---SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 579 TNSRV 593
+++RV
Sbjct: 124 SDARV 128
Score = 42.3 bits (95), Expect = 0.001
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T D+ A F+ GKI +++ + +GYGFV + DAE A G +
Sbjct: 106 PEITTEDIKSA-FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLG 164
Query: 426 GKTLKVSXALLNP----------------ENKVSHKPDTESNLYISNLPPDMTLERLNTL 557
G+ ++ + A P E+ V+ +Y + +T + +
Sbjct: 165 GRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQT 224
Query: 558 FSPFGNITNSRV 593
FSPFG I RV
Sbjct: 225 FSPFGQIMEIRV 236
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNY---IPELMTRDMMYALFSAMGKIESCKLIANR 347
K T +N+ + + N S K Y I +T +M FS G+I ++ +
Sbjct: 181 KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK 240
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLK 440
GY FV + HE A A + NG ++G +K
Sbjct: 241 GYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 75.4 bits (177), Expect = 2e-13
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAA 404
P L V + +T ++ LFS +G +SCK+I +N Y FVE+ +H DA A AA
Sbjct: 8 PRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAA 67
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES--NLYISNLPPDMTLERLNTLFSPFGNI 578
NG + GK +KV+ A P S K DT + ++++ +L P++T E + + F+PFG I
Sbjct: 68 MNGRKILGKEVKVNWA-TTPS---SQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 579 TNSRV 593
+++RV
Sbjct: 124 SDARV 128
Score = 42.3 bits (95), Expect = 0.001
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T D+ A F+ GKI +++ + +GYGFV + DAE A G +
Sbjct: 106 PEITTEDIKSA-FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLG 164
Query: 426 GKTLKVSXALLNP----------------ENKVSHKPDTESNLYISNLPPDMTLERLNTL 557
G+ ++ + A P E+ V+ +Y + +T + +
Sbjct: 165 GRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQT 224
Query: 558 FSPFGNITNSRV 593
FSPFG I RV
Sbjct: 225 FSPFGQIMEIRV 236
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNY---IPELMTRDMMYALFSAMGKIESCKLIANR 347
K T +N+ + + N S K Y I +T +M FS G+I ++ +
Sbjct: 181 KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK 240
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLK 440
GY FV + HE A A + NG ++G +K
Sbjct: 241 GYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 61
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 62 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 121
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 122 RKEFSPFGSITSAKV 136
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 107 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 166
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 167 RIVGSKPLYVALAQRKEERK 186
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 60.5 bits (140), Expect = 5e-09
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + ++Y FSA G I SCK++ + +GY FV +E E A+KA NG
Sbjct: 101 VFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ K +N+YI N ++ E L LFS FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 48.4 bits (110), Expect = 2e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 67.3 bits (157), Expect = 4e-11
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E + + + LFS GK S K++ + +G+GFV YEKHEDA KA
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLYI NL + E+L
Sbjct: 251 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG+IT+++V
Sbjct: 311 RKEFSPFGSITSAKV 325
Score = 59.7 bits (138), Expect = 9e-09
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS--X 449
+Y FSA G I SCK++ + +GY FV +E E A+KA NG+L+ + + V
Sbjct: 115 LYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFK 174
Query: 450 ALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ E ++ K +N+YI N ++ E L LFS FG + +V
Sbjct: 175 SRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKV 222
Score = 49.2 bits (112), Expect = 1e-05
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGSKPLYVALAQRKEERK 375
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 66.1 bits (154), Expect = 1e-10
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAA 404
P L V + +T ++ LFS +G ++CK+I N Y FVE+ +H A A AA
Sbjct: 6 PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAA 65
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDT---------ESNLYISNLPPDMTLERLNTL 557
NG + GK +KV+ A K T ++++ +L P++T E +
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 558 FSPFGNITNSRV 593
F+PFG I+++RV
Sbjct: 126 FAPFGRISDARV 137
Score = 36.3 bits (80), Expect = 0.095
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T D+ A F+ G+I +++ + +GYGFV + DAE A G +
Sbjct: 115 PEITTEDIK-AAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLG 173
Query: 426 GKTLKVSXALLNP 464
G+ ++ + A P
Sbjct: 174 GRQIRTNWATRKP 186
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 66.1 bits (154), Expect = 1e-10
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAA 404
P L V + +T ++ LFS +G ++CK+I N Y FVE+ +H A A AA
Sbjct: 6 PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAA 65
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDT---------ESNLYISNLPPDMTLERLNTL 557
NG + GK +KV+ A K T ++++ +L P++T E +
Sbjct: 66 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 125
Query: 558 FSPFGNITNSRV 593
F+PFG I+++RV
Sbjct: 126 FAPFGRISDARV 137
Score = 44.4 bits (100), Expect = 4e-04
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
SN K+ +++ N +N V + +T +M FS G+I ++ ++
Sbjct: 195 SNTKQLSYDEVVNQSSPSNCTV-----YCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK 249
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLK 440
GY FV + HE A A + NG ++G +K
Sbjct: 250 GYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 280
Score = 40.3 bits (90), Expect = 0.006
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T D+ A F+ G+I +++ + +GYGFV + DAE A G +
Sbjct: 115 PEITTEDIK-AAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLG 173
Query: 426 GKTLKVSXALLNP----------------ENKVSHKPDTESNLYISNLPPDMTLERLNTL 557
G+ ++ + A P + V+ + +Y + +T + +
Sbjct: 174 GRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQT 233
Query: 558 FSPFGNITNSRV 593
FSPFG I RV
Sbjct: 234 FSPFGQIMEIRV 245
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 66.1 bits (154), Expect = 1e-10
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAA 404
P L V + +T ++ LFS +G ++CK+I N Y FVE+ +H A A AA
Sbjct: 44 PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAA 103
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDT---------ESNLYISNLPPDMTLERLNTL 557
NG + GK +KV+ A K T ++++ +L P++T E +
Sbjct: 104 MNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAA 163
Query: 558 FSPFGNITNSRV 593
F+PFG I+++RV
Sbjct: 164 FAPFGRISDARV 175
Score = 44.4 bits (100), Expect = 4e-04
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
SN K+ +++ N +N V + +T +M FS G+I ++ ++
Sbjct: 274 SNTKQLSYDEVVNQSSPSNCTV-----YCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK 328
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLK 440
GY FV + HE A A + NG ++G +K
Sbjct: 329 GYSFVRFNSHESAAHAIVSVNGTTIEGHVVK 359
Score = 36.3 bits (80), Expect = 0.095
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T D+ A F+ G+I +++ + +GYGFV + DAE A G +
Sbjct: 153 PEITTEDIK-AAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLG 211
Query: 426 GKTLKVSXALLNP 464
G+ ++ + A P
Sbjct: 212 GRQIRTNWATRKP 224
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ V + + + +Y SA G I SC ++ + +GYGFV +E HE AE+A NG
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ G+ + V + E ++ + N+YI N DM ERL LF FG +
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 62.5 bits (145), Expect = 1e-09
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
E M + + LF G S K++ + +G+GFV +E+HEDA+KA NG + GK
Sbjct: 200 EDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
Query: 432 TLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERLNTLFSPFGN 575
+ V A E + K E NLY+ NL + ERL FSPFG
Sbjct: 260 QIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGT 319
Query: 576 ITNSRV 593
IT+++V
Sbjct: 320 ITSAKV 325
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANRG---YGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ + G Y +V ++ +DAE A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N+++ NL + + L S FGNI + V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Score = 36.3 bits (80), Expect = 0.095
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ V + + + +Y SA G I SC ++ + +GYGFV +E HE AE+A NG
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ G+ + V + E ++ + N+YI N DM ERL LF FG +
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 62.5 bits (145), Expect = 1e-09
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
E M + + LF G S K++ + +G+GFV +E+HEDA+KA NG + GK
Sbjct: 200 EDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
Query: 432 TLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERLNTLFSPFGN 575
+ V A E + K E NLY+ NL + ERL FSPFG
Sbjct: 260 QIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGT 319
Query: 576 ITNSRV 593
IT+++V
Sbjct: 320 ITSAKV 325
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANRG---YGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ + G Y +V ++ +DAE A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N+++ NL + + L S FGNI + V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Score = 36.3 bits (80), Expect = 0.095
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ V + + + +Y SA G I SC ++ + +GYGFV +E HE AE+A NG
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ G+ + V + E ++ + N+YI N DM ERL LF FG +
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 62.5 bits (145), Expect = 1e-09
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
E M + + LF G S K++ + +G+GFV +E+HEDA+KA NG + GK
Sbjct: 200 EDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
Query: 432 TLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERLNTLFSPFGN 575
+ V A E + K E NLY+ NL + ERL FSPFG
Sbjct: 260 QIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGT 319
Query: 576 ITNSRV 593
IT+++V
Sbjct: 320 ITSAKV 325
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANRG---YGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ + G Y +V ++ +DAE A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N+++ NL + + L S FGNI + V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Score = 36.3 bits (80), Expect = 0.095
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ V + + + +Y SA G I SC ++ + +GYGFV +E HE AE+A NG
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ G+ + V + E ++ + N+YI N DM ERL LF FG +
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 62.5 bits (145), Expect = 1e-09
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
E M + + LF G S K++ + +G+GFV +E+HEDA+KA NG + GK
Sbjct: 200 EDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
Query: 432 TLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERLNTLFSPFGN 575
+ V A E + K E NLY+ NL + ERL FSPFG
Sbjct: 260 QIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGT 319
Query: 576 ITNSRV 593
IT+++V
Sbjct: 320 ITSAKV 325
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANRG---YGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ + G Y +V ++ +DAE A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N+++ NL + + L S FGNI + V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Score = 36.3 bits (80), Expect = 0.095
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 65.7 bits (153), Expect = 1e-10
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ V + + + +Y SA G I SC ++ + +GYGFV +E HE AE+A NG
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ G+ + V + E ++ + N+YI N DM ERL LF FG +
Sbjct: 161 MLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 62.5 bits (145), Expect = 1e-09
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
E M + + LF G S K++ + +G+GFV +E+HEDA+KA NG + GK
Sbjct: 200 EDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGK 259
Query: 432 TLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERLNTLFSPFGN 575
+ V A E + K E NLY+ NL + ERL FSPFG
Sbjct: 260 QIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGT 319
Query: 576 ITNSRV 593
IT+++V
Sbjct: 320 ITSAKV 325
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANRG---YGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ + G Y +V ++ +DAE A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N+++ NL + + L S FGNI + V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Score = 36.3 bits (80), Expect = 0.095
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FSA G I SCK++ + +GYGFV +E E AE+A NG
Sbjct: 76 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 135
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+YI N DM ERL LF FG +
Sbjct: 136 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 195
Query: 588 RV 593
+V
Sbjct: 196 KV 197
Score = 63.3 bits (147), Expect = 7e-10
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E M + + LF G S K++ + +G+GFV +E+HEDA+KA
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 225
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLY+ NL + ERL
Sbjct: 226 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 285
Query: 549 NTLFSPFGNITNSRV 593
FSPFG IT+++V
Sbjct: 286 RKEFSPFGTITSAKV 300
Score = 48.0 bits (109), Expect = 3e-05
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Frame = +3
Query: 285 MMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
M+Y FS G I S C+ +I R GY +V +++ DAE+A N +++GK +++
Sbjct: 1 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIM 60
Query: 447 XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ +P S + N++I NL + + L FS FGNI + +V
Sbjct: 61 WSQRDP----SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 105
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 261 DRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 320
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 321 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 350
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FSA G I SCK++ + +GYGFV +E E AE+A NG
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+YI N DM ERL LF FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 63.3 bits (147), Expect = 7e-10
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E M + + LF G S K++ + +G+GFV +E+HEDA+KA
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLY+ NL + ERL
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG IT+++V
Sbjct: 311 RKEFSPFGTITSAKV 325
Score = 49.6 bits (113), Expect = 1e-05
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FSA G I SCK++ + +GYGFV +E E AE+A NG
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+YI N DM ERL LF FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 63.3 bits (147), Expect = 7e-10
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E M + + LF G S K++ + +G+GFV +E+HEDA+KA
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLY+ NL + ERL
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG IT+++V
Sbjct: 311 RKEFSPFGTITSAKV 325
Score = 49.6 bits (113), Expect = 1e-05
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FSA G I SCK++ + +GYGFV +E E AE+A NG
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+YI N DM ERL LF FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 63.3 bits (147), Expect = 7e-10
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E M + + LF G S K++ + +G+GFV +E+HEDA+KA
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLY+ NL + ERL
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG IT+++V
Sbjct: 311 RKEFSPFGTITSAKV 325
Score = 49.6 bits (113), Expect = 1e-05
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 64.5 bits (150), Expect = 3e-10
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FSA G I SCK++ + +GYGFV +E E AE+A NG
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+YI N DM ERL LF FG +
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 63.3 bits (147), Expect = 7e-10
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + + E M + + LF G S K++ + +G+GFV +E+HEDA+KA
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + GK + V A E + K E NLY+ NL + ERL
Sbjct: 251 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 310
Query: 549 NTLFSPFGNITNSRV 593
FSPFG IT+++V
Sbjct: 311 RKEFSPFGTITSAKV 325
Score = 49.6 bits (113), Expect = 1e-05
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 286 DRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 345
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 346 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 375
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 64.5 bits (150), Expect = 3e-10
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FS G I SCK+ + RG+GFV +E HE A++A NG
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+Y+ NLP D+ + L LFS FG + +
Sbjct: 161 MLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 55.6 bits (128), Expect = 1e-07
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V +P + + LFS GK+ S K++ + R +GFV +EKHE+A+KA
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + G+ L A E + K E NLY+ NL + ++L
Sbjct: 251 MNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKL 310
Query: 549 NTLFSPFGNITNSR 590
FSP+G IT+++
Sbjct: 311 RKEFSPYGVITSAK 324
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANR---GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +A R GY ++ +++ DAE+A N +++G+
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
+++ + +P + S N++I NL + + L FS FGNI + +V+
Sbjct: 82 IRIMWSQRDPGLRKS----GVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 64.5 bits (150), Expect = 3e-10
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FS G I SCK+ + RG+GFV +E HE A++A NG
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+Y+ NLP D+ + L LFS FG + +
Sbjct: 161 MLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 57.2 bits (132), Expect = 5e-08
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V +P + + LFS GK+ S K++ + R +GFV +EKHE+A+KA
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + G+ L A E + K E NLY+ NL + ++L
Sbjct: 251 MNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSP+G IT+++V
Sbjct: 311 RKEFSPYGVITSAKV 325
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANR---GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +A R GY ++ +++ DAE+A N +++G+
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
+++ + +P + S N++I NL + + L FS FGNI + +V+
Sbjct: 82 IRIMWSQRDPGLRKS----GVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Score = 37.1 bits (82), Expect = 0.055
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L V + + + D + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGTKPLYVALAQRKEERK 375
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 64.5 bits (150), Expect = 3e-10
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FS G I SCK+ + RG+GFV +E HE A++A NG
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+Y+ NLP D+ + L LFS FG + +
Sbjct: 161 MLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 55.6 bits (128), Expect = 1e-07
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V +P + + LFS GK+ S K++ + R +GFV +EKHE+A+KA
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + G+ L A E + K E NLY+ NL + ++L
Sbjct: 251 MNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKL 310
Query: 549 NTLFSPFGNITNSR 590
FSP+G IT+++
Sbjct: 311 RKEFSPYGVITSAK 324
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANR---GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +A R GY ++ +++ DAE+A N +++G+
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
+++ + +P + S N++I NL + + L FS FGNI + +V+
Sbjct: 82 IRIMWSQRDPGLRKS----GVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 64.5 bits (150), Expect = 3e-10
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FS G I SCK+ + RG+GFV +E HE A++A NG
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
+L+ + + V + E ++ + +N+Y+ NLP D+ + L LFS FG + +
Sbjct: 161 MLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 588 RV 593
+V
Sbjct: 221 KV 222
Score = 57.2 bits (132), Expect = 5e-08
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V +P + + LFS GK+ S K++ + R +GFV +EKHE+A+KA
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
NG + G+ L A E + K E NLY+ NL + ++L
Sbjct: 251 MNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKL 310
Query: 549 NTLFSPFGNITNSRV 593
FSP+G IT+++V
Sbjct: 311 RKEFSPYGVITSAKV 325
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CKLIANR---GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +A R GY ++ +++ DAE+A N +++G+
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
+++ + +P + S N++I NL + + L FS FGNI + +V+
Sbjct: 82 IRIMWSQRDPGLRKS----GVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Score = 37.1 bits (82), Expect = 0.055
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L V + + + D + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 355
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 356 RIVGTKPLYVALAQRKEERK 375
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 62.5 bits (145), Expect = 1e-09
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + + + +Y FSA G I SCK++ + +GYGFV +E E AE+A NG
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Query: 414 LLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSP 566
+L+ + + V + E ++ + +N+YI N DM ERL LF P
Sbjct: 161 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGP 213
Score = 60.5 bits (140), Expect = 5e-09
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTES------- 500
++G+GFV +E+HEDA+KA NG + GK + V A E + K E
Sbjct: 227 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 286
Query: 501 -----NLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
NLY+ NL + ERL FSPFG IT+++V
Sbjct: 287 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKV 322
Score = 49.6 bits (113), Expect = 1e-05
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G I S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+++ + +P S + N++I NL + + L FS FGNI + +V
Sbjct: 82 VRIMWSQRDP----SLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHED 383
D T L V + + + + + FS G I S K++ ++G+GFV + E+
Sbjct: 283 DRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEE 342
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENK 473
A KA NG ++ K L V+ A E +
Sbjct: 343 ATKAVTEMNGRIVATKPLYVALAQRKEERQ 372
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 61.7 bits (143), Expect = 2e-09
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTES------- 500
++G+GFV YEKHEDA KA NG + GK + V A E + K E
Sbjct: 9 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 68
Query: 501 -----NLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
NLYI NL + E+L FSPFG+IT+++V
Sbjct: 69 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 104
Score = 37.1 bits (82), Expect = 0.055
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 413
L + + + + + + FS G I S K++ ++G+GFV + E+A KA NG
Sbjct: 75 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNG 134
Query: 414 LLMQGKTLKVSXALLNPENK 473
++ K L V+ A E K
Sbjct: 135 RIVGSKPLYVALAQRKEERK 154
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 60.5 bits (140), Expect = 5e-09
Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = +3
Query: 339 ANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTES--NLYI 512
+N Y FVE+ +H DA A AA NG + GK +KV+ A P S K DT + ++++
Sbjct: 7 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA-TTPS---SQKKDTSNHFHVFV 62
Query: 513 SNLPPDMTLERLNTLFSPFGNITNSRV 593
+L P++T E + + F+PFG I+++RV
Sbjct: 63 GDLSPEITTEDIKSAFAPFGKISDARV 89
Score = 42.3 bits (95), Expect = 0.001
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T D+ A F+ GKI +++ + +GYGFV + DAE A G +
Sbjct: 67 PEITTEDIKSA-FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLG 125
Query: 426 GKTLKVSXALLNP----------------ENKVSHKPDTESNLYISNLPPDMTLERLNTL 557
G+ ++ + A P E+ V+ +Y + +T + +
Sbjct: 126 GRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQT 185
Query: 558 FSPFGNITNSRV 593
FSPFG I RV
Sbjct: 186 FSPFGQIMEIRV 197
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNY---IPELMTRDMMYALFSAMGKIESCKLIANR 347
K T +N+ + + N S K Y I +T +M FS G+I ++ +
Sbjct: 142 KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK 201
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLK 440
GY FV + HE A A + NG ++G +K
Sbjct: 202 GYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 232
>X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein.
Length = 372
Score = 52.8 bits (121), Expect = 1e-06
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S K I ++
Sbjct: 5 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDK 64
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 65 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQ-------------KAKQQEQDPTNLY 111
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 112 ISNLPLSMDEQELENMLKPFGQVISTRI 139
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 107 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 166
Query: 402 AFNG 413
FNG
Sbjct: 167 HFNG 170
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 52.8 bits (121), Expect = 1e-06
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V + E ++ +++ LF G + + + +R GYGFVE+ EDA+ A N
Sbjct: 17 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNM 76
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + GK ++V+ A + +N D +N++I NL P++ + L FS FG I +
Sbjct: 77 IKLYGKPIRVNKASAHNKNL-----DVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131
Query: 594 SQXYRLCLLRDPATG 638
++RDP TG
Sbjct: 132 -------IMRDPDTG 139
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 95 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 153
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 154 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 211
Query: 561 S 563
+
Sbjct: 212 A 212
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 52.8 bits (121), Expect = 1e-06
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V + E ++ +++ LF G + + + +R GYGFVE+ EDA+ A N
Sbjct: 17 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNM 76
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + GK ++V+ A + +N D +N++I NL P++ + L FS FG I +
Sbjct: 77 IKLYGKPIRVNKASAHNKNL-----DVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131
Query: 594 SQXYRLCLLRDPATG 638
++RDP TG
Sbjct: 132 -------IMRDPDTG 139
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 95 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 153
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 154 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 211
Query: 561 S 563
+
Sbjct: 212 A 212
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 52.8 bits (121), Expect = 1e-06
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V + E ++ +++ LF G + + + +R GYGFVE+ EDA+ A N
Sbjct: 17 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNM 76
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + GK ++V+ A + +N D +N++I NL P++ + L FS FG I +
Sbjct: 77 IKLYGKPIRVNKASAHNKNL-----DVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131
Query: 594 SQXYRLCLLRDPATG 638
++RDP TG
Sbjct: 132 -------IMRDPDTG 139
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 95 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 153
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 154 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 211
Query: 561 S 563
+
Sbjct: 212 A 212
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 52.8 bits (121), Expect = 1e-06
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V + E ++ +++ LF G + + + +R GYGFVE+ EDA+ A N
Sbjct: 17 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNM 76
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + GK ++V+ A + +N D +N++I NL P++ + L FS FG I +
Sbjct: 77 IKLYGKPIRVNKASAHNKNL-----DVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131
Query: 594 SQXYRLCLLRDPATG 638
++RDP TG
Sbjct: 132 -------IMRDPDTG 139
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 95 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 153
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 154 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 211
Query: 561 S 563
+
Sbjct: 212 A 212
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 52.8 bits (121), Expect = 1e-06
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V + E ++ +++ LF G + + + +R GYGFVE+ EDA+ A N
Sbjct: 17 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNM 76
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + GK ++V+ A + +N D +N++I NL P++ + L FS FG I +
Sbjct: 77 IKLYGKPIRVNKASAHNKNL-----DVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131
Query: 594 SQXYRLCLLRDPATG 638
++RDP TG
Sbjct: 132 -------IMRDPDTG 139
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 95 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 153
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 154 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 211
Query: 561 S 563
+
Sbjct: 212 A 212
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 52.8 bits (121), Expect = 1e-06
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V + E ++ +++ LF G + + + +R GYGFVE+ EDA+ A N
Sbjct: 17 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNM 76
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + GK ++V+ A + +N D +N++I NL P++ + L FS FG I +
Sbjct: 77 IKLYGKPIRVNKASAHNKNL-----DVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131
Query: 594 SQXYRLCLLRDPATG 638
++RDP TG
Sbjct: 132 -------IMRDPDTG 139
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 95 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 153
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 154 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 211
Query: 561 S 563
+
Sbjct: 212 A 212
>X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein.
Length = 389
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S K I ++
Sbjct: 5 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDK 64
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 65 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK-------------QQEQDPTNLY 111
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 112 ISNLPLSMDEQELENMLKPFGQVISTRI 139
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 107 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 166
Query: 402 AFNG 413
FNG
Sbjct: 167 HFNG 170
>D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein.
Length = 403
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S K I ++
Sbjct: 38 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDK 97
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 98 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK-------------QQEQDPTNLY 144
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 145 ISNLPLSMDEQELENMLKPFGQVISTRI 172
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 199
Query: 402 AFNG 413
FNG
Sbjct: 200 HFNG 203
>BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein.
Length = 433
Score = 52.0 bits (119), Expect = 2e-06
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Frame = +3
Query: 192 NDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GY 353
N N G+ +S T L + +P T + L GKI S K I ++ GY
Sbjct: 48 NSSNNSSGE---QLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGY 104
Query: 354 GFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDM 533
GFV+++ A+KA A+ +Q + K + +NLYISNLP M
Sbjct: 105 GFVDFDSPAAAQKAVASLKANGVQAQMAK-------------QQEQDPTNLYISNLPISM 151
Query: 534 TLERLNTLFSPFGNITNSRV 593
+ L + PFG++ ++R+
Sbjct: 152 DEQELENMLKPFGHVISTRI 171
>BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 406
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S K I ++
Sbjct: 38 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDK 97
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 98 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK-------------QQEQDPTNLY 144
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 145 ISNLPLSMDEQELENMLKPFGQVISTRI 172
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 199
Query: 402 AFNG 413
FNG
Sbjct: 200 HFNG 203
>BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S K I ++
Sbjct: 38 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDK 97
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 98 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK-------------QQEQDPTNLY 144
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 145 ISNLPLSMDEQELENMLKPFGQVISTRI 172
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 199
Query: 402 AFNG 413
FNG
Sbjct: 200 HFNG 203
>BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, single
stranded interacting protein 1 protein.
Length = 403
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S K I ++
Sbjct: 38 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDK 97
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 98 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK-------------QQEQDPTNLY 144
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 145 ISNLPLSMDEQELENMLKPFGQVISTRI 172
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 140 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 199
Query: 402 AFNG 413
FNG
Sbjct: 200 HFNG 203
>AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif single
stranded interacting protein 3 isoform transcript vari
protein.
Length = 437
Score = 52.0 bits (119), Expect = 2e-06
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Frame = +3
Query: 192 NDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GY 353
N N G+ +S T L + +P T + L GKI S K I ++ GY
Sbjct: 48 NSSNNSSGE---QLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGY 104
Query: 354 GFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDM 533
GFV+++ A+KA A+ +Q + K + +NLYISNLP M
Sbjct: 105 GFVDFDSPAAAQKAVASLKANGVQAQMAK-------------QQEQDPTNLYISNLPISM 151
Query: 534 TLERLNTLFSPFGNITNSRV 593
+ L + PFG++ ++R+
Sbjct: 152 DEQELENMLKPFGHVISTRI 171
>AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein
protein.
Length = 411
Score = 52.0 bits (119), Expect = 2e-06
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Frame = +3
Query: 192 NDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GY 353
N N G+ +S T L + +P T + L GKI S K I ++ GY
Sbjct: 39 NSSNNSSGE---QLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGY 95
Query: 354 GFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDM 533
GFV+++ A+KA A+ +Q + K + +NLYISNLP M
Sbjct: 96 GFVDFDSPAAAQKAVASLKANGVQAQMAK-------------QQEQDPTNLYISNLPISM 142
Query: 534 TLERLNTLFSPFGNITNSRV 593
+ L + PFG++ ++R+
Sbjct: 143 DEQELENMLKPFGHVISTRI 162
>AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein.
Length = 188
Score = 52.0 bits (119), Expect = 2e-06
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S K I ++
Sbjct: 13 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDK 72
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 73 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK-------------QQEQDPTNLY 119
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 120 ISNLPLSMDEQELENMLKPFGQVISTRI 147
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 115 PTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIG 174
Query: 402 AFNG 413
FNG
Sbjct: 175 HFNG 178
>D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein.
Length = 407
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Frame = +3
Query: 204 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 365
+ G + N +S T L + + T + L GKI S K I ++ GYGFV+
Sbjct: 44 SSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVD 103
Query: 366 YEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLER 545
++ A+KA A +Q + K + +NLYISNLP M +
Sbjct: 104 FDSPSAAQKAVTALKASGVQAQMAK-------------QQEQDPTNLYISNLPLSMDEQE 150
Query: 546 LNTLFSPFGNITNSRV 593
L + PFG + ++R+
Sbjct: 151 LEGMLKPFGQVISTRI 166
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 134 PTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEKCEAIIT 193
Query: 402 AFNG 413
FNG
Sbjct: 194 HFNG 197
>BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Frame = +3
Query: 204 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 365
+ G + N +S T L + + T + L GKI S K I ++ GYGFV+
Sbjct: 44 SSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVD 103
Query: 366 YEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLER 545
++ A+KA A +Q + K + +NLYISNLP M +
Sbjct: 104 FDSPSAAQKAVTALKASGVQAQMAK-------------QQEQDPTNLYISNLPLSMDEQE 150
Query: 546 LNTLFSPFGNITNSRV 593
L + PFG + ++R+
Sbjct: 151 LEGMLKPFGQVISTRI 166
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 134 PTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEKCEAIIT 193
Query: 402 AFNG 413
FNG
Sbjct: 194 HFNG 197
>BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, single
stranded interacting protein 2 protein.
Length = 407
Score = 51.6 bits (118), Expect = 2e-06
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Frame = +3
Query: 204 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 365
+ G + N +S T L + + T + L GKI S K I ++ GYGFV+
Sbjct: 44 SSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVD 103
Query: 366 YEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLER 545
++ A+KA A +Q + K + +NLYISNLP M +
Sbjct: 104 FDSPSAAQKAVTALKASGVQAQMAK-------------QQEQDPTNLYISNLPLSMDEQE 150
Query: 546 LNTLFSPFGNITNSRV 593
L + PFG + ++R+
Sbjct: 151 LEGMLKPFGQVISTRI 166
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + G++ S +++ +RG GF E E E
Sbjct: 134 PTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEKCEAIIT 193
Query: 402 AFNG 413
FNG
Sbjct: 194 HFNG 197
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 51.6 bits (118), Expect = 2e-06
Identities = 33/99 (33%), Positives = 53/99 (53%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNL 521
++GYGFVE+ EDA+ A N + + GK ++V+ A + +N D +N++I NL
Sbjct: 10 HQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL-----DVGANIFIGNL 64
Query: 522 PPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRDPATG 638
P++ + L FS FG I + ++RDP TG
Sbjct: 65 DPEIDEKLLYDTFSAFGVILQTPK-------IMRDPDTG 96
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 52 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 110
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 111 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 168
Query: 561 S 563
+
Sbjct: 169 A 169
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 51.6 bits (118), Expect = 2e-06
Identities = 33/99 (33%), Positives = 53/99 (53%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNL 521
++GYGFVE+ EDA+ A N + + GK ++V+ A + +N D +N++I NL
Sbjct: 10 HQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL-----DVGANIFIGNL 64
Query: 522 PPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRDPATG 638
P++ + L FS FG I + ++RDP TG
Sbjct: 65 DPEIDEKLLYDTFSAFGVILQTPK-------IMRDPDTG 96
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 52 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 110
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 111 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 168
Query: 561 S 563
+
Sbjct: 169 A 169
>BC041956-1|AAH41956.1| 243|Homo sapiens LOC645974 protein protein.
Length = 243
Score = 51.2 bits (117), Expect = 3e-06
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEY 368
G + N + L V + +T M+Y FS G I S + ++ GY +V Y
Sbjct: 34 GDCEGNPDFQMASLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNY 93
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERL 548
++ DA++A N +++G+ +++ + +P S + N++I NL + + L
Sbjct: 94 QQPVDAKRALETLNFDVIKGRPVRIMWSQRDP----SLRKSGVGNVFIKNLGKTIDNKAL 149
Query: 549 NTLFSPFGNITNSRVS 596
+FS FGNI + +V+
Sbjct: 150 YNIFSAFGNILSCKVA 165
Score = 46.4 bits (105), Expect = 9e-05
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+Y +FSA G I SCK+ + +GYGFV ++K E AE+A NG+ + + + V
Sbjct: 149 LYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFV 204
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 50.8 bits (116), Expect = 4e-06
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V + E ++ +++ LF G + + + +R GYGFVE+ EDA+ A +
Sbjct: 17 VGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDM 76
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + GK ++V+ A + +N D +N++I NL P++ + L FS FG I +
Sbjct: 77 IKLYGKPIRVNKASAHNKNL-----DVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131
Query: 594 SQXYRLCLLRDPATG 638
++RDP TG
Sbjct: 132 -------IMRDPDTG 139
Score = 32.3 bits (70), Expect = 1.6
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKI-ESCKLIAN------RGYGFVEYEKHE 380
N +V + N PE+ + ++Y FSA G I ++ K++ + +GY F+ + +
Sbjct: 95 NLDVGANIFIGNLDPEIDEK-LLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFD 153
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 560
++ A A NG + + + VS A H E L N P +R + LF
Sbjct: 154 ASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQN--PLSQADRPHQLF 211
Query: 561 S 563
+
Sbjct: 212 A 212
>D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein.
Length = 373
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 6/148 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR 347
S + + N+ + +S T L + +P T + L GKI S I ++
Sbjct: 5 SPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTNAILHK 64
Query: 348 ------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLY 509
GYGFV+++ A+KA +A +Q + K + +NLY
Sbjct: 65 TTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAK-------------QQEQDPTNLY 111
Query: 510 ISNLPPDMTLERLNTLFSPFGNITNSRV 593
ISNLP M + L + PFG + ++R+
Sbjct: 112 ISNLPLSMDKQELENMLKPFGQVISTRI 139
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI-----ANRGYGFVEYEKHEDAEKARA 401
PT L ++ +P M + + + G++ S +++ +RG GF E E E
Sbjct: 107 PTNLYISNLPLSMDKQELENMLKPFGQVISTRILRDASGTSRGVGFARTESTEKCEAVTG 166
Query: 402 AFNG 413
FNG
Sbjct: 167 HFNG 170
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 50.0 bits (114), Expect = 7e-06
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V I + + + + LF G ES K+I + +G+GFV YE HE A+KA
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
+G + GK L V A E + E +YI NL + E+L
Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKL 318
Query: 549 NTLFSPFGNITNSRV 593
FS FG+I+ ++V
Sbjct: 319 KEEFSSFGSISRAKV 333
Score = 45.2 bits (102), Expect = 2e-04
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T DM+Y F G + ++ + GYG+V + DAE A N L+ GK
Sbjct: 29 VTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKP 88
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++ + P++++ + N++I NL + L LFS FGNI + +V
Sbjct: 89 FRLMWS--QPDDRL--RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXAL 455
++ LFSA G I SCK++ ++GY +V ++ A +A NG+ + + + V
Sbjct: 122 LFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFK 181
Query: 456 LNPENKV----SHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
PE + + T +N+++ N+ D+ E+L LF +G + +V
Sbjct: 182 F-PEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 230
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + E + + + FS+ G I K++ +G+G V + E+A KA NG
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363
Query: 414 LLMQGKTLKVS 446
++ K L V+
Sbjct: 364 RIVGSKPLHVT 374
>AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif single
stranded interacting protein 3 isoform transcript vari
protein.
Length = 419
Score = 50.0 bits (114), Expect = 7e-06
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Frame = +3
Query: 192 NDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GY 353
N N G+ +S T L + +P T + L GKI S K + ++ GY
Sbjct: 47 NSSNNSSGE---QLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKALLDKNTNQCKGY 103
Query: 354 GFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDM 533
GFV+++ A+KA A+ +Q + K + +NLYISNLP M
Sbjct: 104 GFVDFDSPAAAQKAVASLKANGVQAQMAK-------------QQEQDPTNLYISNLPISM 150
Query: 534 TLERLNTLFSPFGNITNSRV 593
+ L + PFG + ++R+
Sbjct: 151 DEQELENMLKPFGPVISTRI 170
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 50.0 bits (114), Expect = 7e-06
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V I + + + + LF G ES K+I + +G+GFV YE HE A+KA
Sbjct: 35 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 94
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
+G + GK L V A E + E +YI NL + E+L
Sbjct: 95 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKL 154
Query: 549 NTLFSPFGNITNSRV 593
FS FG+I+ ++V
Sbjct: 155 KEEFSSFGSISRAKV 169
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + E + + + FS+ G I K++ +G+G V + E+A KA NG
Sbjct: 140 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 199
Query: 414 LLMQGKTLKVS 446
++ K L V+
Sbjct: 200 RIVGSKPLHVT 210
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 50.0 bits (114), Expect = 7e-06
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V I + + + + LF G ES K+I + +G+GFV YE HE A+KA
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
+G + GK L V A E + E +YI NL + E+L
Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKL 318
Query: 549 NTLFSPFGNITNSRV 593
FS FG+I+ ++V
Sbjct: 319 KEEFSSFGSISRAKV 333
Score = 45.2 bits (102), Expect = 2e-04
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T DM+Y F G + ++ + GYG+V + DAE A N L+ GK
Sbjct: 29 VTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKP 88
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++ + P++++ + N++I NL + L LFS FGNI + +V
Sbjct: 89 FRLMWS--QPDDRL--RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXAL 455
++ LFSA G I SCK++ ++GY +V ++ A +A NG+ + + + V
Sbjct: 122 LFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFK 181
Query: 456 LNPENKV----SHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
PE + + T +N+++ N+ D+ E+L LF +G + +V
Sbjct: 182 F-PEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 230
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + E + + + FS+ G I K++ +G+G V + E+A KA NG
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363
Query: 414 LLMQGKTLKVS 446
++ K L V+
Sbjct: 364 RIVGSKPLHVT 374
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 50.0 bits (114), Expect = 7e-06
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V I + + + + LF G ES K+I + +G+GFV YE HE A+KA
Sbjct: 184 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 243
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
+G + GK L V A E + E +YI NL + E+L
Sbjct: 244 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKL 303
Query: 549 NTLFSPFGNITNSRV 593
FS FG+I+ ++V
Sbjct: 304 KEEFSSFGSISRAKV 318
Score = 45.2 bits (102), Expect = 2e-04
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T DM+Y F G + ++ + GYG+V + DAE A N L+ GK
Sbjct: 14 VTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKP 73
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++ + P++++ + N++I NL + L LFS FGNI + +V
Sbjct: 74 FRLMWS--QPDDRL--RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 122
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXAL 455
++ LFSA G I SCK++ ++GY +V ++ A +A NG+ + + + V
Sbjct: 107 LFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFK 166
Query: 456 LNPENKV----SHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
PE + + T +N+++ N+ D+ E+L LF +G + +V
Sbjct: 167 F-PEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 215
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + E + + + FS+ G I K++ +G+G V + E+A KA NG
Sbjct: 289 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 348
Query: 414 LLMQGKTLKVS 446
++ K L V+
Sbjct: 349 RIVGSKPLHVT 359
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 50.0 bits (114), Expect = 7e-06
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V I + + + + LF G ES K+I + +G+GFV YE HE A+KA
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 405 FNGLLMQGKTLKVSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLERL 548
+G + GK L V A E + E +YI NL + E+L
Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKL 318
Query: 549 NTLFSPFGNITNSRV 593
FS FG+I+ ++V
Sbjct: 319 KEEFSSFGSISRAKV 333
Score = 45.2 bits (102), Expect = 2e-04
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T DM+Y F G + ++ + GYG+V + DAE A N L+ GK
Sbjct: 29 VTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKP 88
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++ + P++++ + N++I NL + L LFS FGNI + +V
Sbjct: 89 FRLMWS--QPDDRL--RKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137
Score = 45.2 bits (102), Expect = 2e-04
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLI----ANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXAL 455
++ LFSA G I SCK++ ++GY +V ++ A +A NG+ + + + V
Sbjct: 122 LFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFK 181
Query: 456 LNPENKV----SHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
PE + + T +N+++ N+ D+ E+L LF +G + +V
Sbjct: 182 F-PEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 230
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNG 413
+ + + E + + + FS+ G I K++ +G+G V + E+A KA NG
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNG 363
Query: 414 LLMQGKTLKVS 446
++ K L V+
Sbjct: 364 RIVGSKPLHVT 374
>AL662864-2|CAI40931.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340530)
protein.
Length = 200
Score = 49.6 bits (113), Expect = 1e-05
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T M+Y FS G I S ++ ++ GY +V Y++ DA++A N +++
Sbjct: 11 PEV-TEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIK 69
Query: 426 GKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
G+ +++ + +P S + N++I NL + + L +FS FGNI + +V+
Sbjct: 70 GRPVRIMWSQRDP----SLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Score = 46.4 bits (105), Expect = 9e-05
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+Y +FSA G I SCK+ + +GYGFV ++K E AE+A NG+ + + + V
Sbjct: 106 LYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFV 161
>AL662864-1|CAI40930.1| 200|Homo sapiens novel protein similar to
poly(A)binding protein, cytoplasmic 1 (LOC340529)
protein.
Length = 200
Score = 49.6 bits (113), Expect = 1e-05
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQ 425
PE+ T M+Y FS G I S ++ ++ GY +V Y++ DA++A N +++
Sbjct: 11 PEV-TEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIK 69
Query: 426 GKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
G+ +++ + +P S + N++I NL + + L +FS FGNI + +V+
Sbjct: 70 GRPVRIMWSQRDP----SLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVA 122
Score = 46.4 bits (105), Expect = 9e-05
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = +3
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+Y +FSA G I SCK+ + +GYGFV ++K E AE+A NG+ + + + V
Sbjct: 106 LYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFV 161
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 49.2 bits (112), Expect = 1e-05
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Frame = +3
Query: 276 TRDMMYALFSAMGKIESCKL---------IANRGYGFVEYEKHEDAEKARAAFNGLLMQG 428
T + + +FS +G ++SC + + + G+GFVEY K E A+KA G ++ G
Sbjct: 742 TEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 801
Query: 429 KTL--KVSXALLNPENKVSHK-----PDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
L ++S P ++ K T S + + N+P + LFS FG +
Sbjct: 802 HKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTV 861
Query: 588 RV 593
R+
Sbjct: 862 RL 863
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITN 584
S L + NLP M ER LF+ FG +T+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTD 30
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 49.2 bits (112), Expect = 1e-05
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Frame = +3
Query: 276 TRDMMYALFSAMGKIESCKL---------IANRGYGFVEYEKHEDAEKARAAFNGLLMQG 428
T + + +FS +G ++SC + + + G+GFVEY K E A+KA G ++ G
Sbjct: 742 TEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 801
Query: 429 KTL--KVSXALLNPENKVSHK-----PDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
L ++S P ++ K T S + + N+P + LFS FG +
Sbjct: 802 HKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTV 861
Query: 588 RV 593
R+
Sbjct: 862 RL 863
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITN 584
S L + NLP M ER LF+ FG +T+
Sbjct: 2 SRLIVKNLPNGMKEERFRQLFAAFGTLTD 30
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 49.2 bits (112), Expect = 1e-05
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Frame = +3
Query: 276 TRDMMYALFSAMGKIESCKL---------IANRGYGFVEYEKHEDAEKARAAFNGLLMQG 428
T + + +FS +G ++SC + + + G+GFVEY K E A+KA G ++ G
Sbjct: 755 TEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 814
Query: 429 KTL--KVSXALLNPENKVSHK-----PDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
L ++S P ++ K T S + + N+P + LFS FG +
Sbjct: 815 HKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIPFQAHSREIRELFSTFGELKTV 874
Query: 588 RV 593
R+
Sbjct: 875 RL 876
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 486 PDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
P S L + NLP M ER LF+ FG +T+
Sbjct: 11 PCAMSRLIVKNLPNGMKEERFRQLFAAFGTLTD 43
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G + P +L V + +T DM+ +F G+IES +L+ +
Sbjct: 233 NRAAAMANNLQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSE 286
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A+KA NG + G+ +KV
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G + P +L V + +T DM+ +F G+IES +L+ +
Sbjct: 233 NRAAAMANNLQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSE 286
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A+KA NG + G+ +KV
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G + P +L V + +T DM+ +F G+IES +L+ +
Sbjct: 76 NRAAAMANNLQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSE 129
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A+KA NG + G+ +KV
Sbjct: 130 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G + P +L V + +T DM+ +F G+IES +L+ +
Sbjct: 233 NRAAAMANNLQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSE 286
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A+KA NG + G+ +KV
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G + P +L V + +T DM+ +F G+IES +L+ +
Sbjct: 211 NRAAAMANNLQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSE 264
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A+KA NG + G+ +KV
Sbjct: 265 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G + P +L V + +T DM+ +F G+IES +L+ +
Sbjct: 233 NRAAAMANNLQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSE 286
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A+KA NG + G+ +KV
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G + P +L V + +T DM+ +F G+IES +L+ +
Sbjct: 233 NRAAAMANNLQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSE 286
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A+KA NG + G+ +KV
Sbjct: 287 TGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protein 1
isoform 4 variant protein.
Length = 303
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANTNVS-PTKLMVNYIPELMTRDMM 290
SEQ P +++ + + N S P +L V+ IP +
Sbjct: 115 SEQSPADTSAQTVSGTATTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDL 174
Query: 291 YALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 175 RQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 232
>L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA,
complete cds. ).
Length = 471
Score = 47.6 bits (108), Expect = 4e-05
Identities = 33/118 (27%), Positives = 57/118 (48%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L++ NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLHVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein.
Length = 963
Score = 47.6 bits (108), Expect = 4e-05
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDA 386
+T++ KL ++ +P T++ + + A G ++ +L+ NR G +VEYE A
Sbjct: 795 STSLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQA 854
Query: 387 EKARAAFNGLLMQGKTLKVSXALLN-PENKVSHKPDT 494
+A +G+ ++ +KV A+ N P+ KV KP+T
Sbjct: 855 SQAVMKMDGMTIKENIIKV--AISNPPQRKVPEKPET 889
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 165 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 224
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 225 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 256
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 94 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 153
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 154 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 185
>BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 47.6 bits (108), Expect = 4e-05
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDA 386
+T++ KL ++ +P T++ + + A G ++ +L+ NR G +VEYE A
Sbjct: 795 STSLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQA 854
Query: 387 EKARAAFNGLLMQGKTLKVSXALLN-PENKVSHKPDT 494
+A +G+ ++ +KV A+ N P+ KV KP+T
Sbjct: 855 SQAVMKMDGMTIKENIIKV--AISNPPQRKVPEKPET 889
>BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 47.6 bits (108), Expect = 4e-05
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDA 386
+T++ KL ++ +P T++ + + A G ++ +L+ NR G +VEYE A
Sbjct: 795 STSLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQA 854
Query: 387 EKARAAFNGLLMQGKTLKVSXALLN-PENKVSHKPDT 494
+A +G+ ++ +KV A+ N P+ KV KP+T
Sbjct: 855 SQAVMKMDGMTIKENIIKV--AISNPPQRKVPEKPET 889
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 94 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 153
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 154 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 185
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 104 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 163
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 164 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 195
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 102 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 161
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 162 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 193
>AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeceptor 116 (GPR116) protein.
Length = 129
Score = 47.6 bits (108), Expect = 4e-05
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSR 590
+++ + +P S + N++I NL + + L FS FGNI + +
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCK 129
>AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleg frame 148 protein.
Length = 129
Score = 47.6 bits (108), Expect = 4e-05
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIES---CK-LIANR--GYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
+T M+Y FS G + S C+ +I R GY +V +++ DAE+A N +++GK
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 435 LKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSR 590
+++ + +P S + N++I NL + + L FS FGNI + +
Sbjct: 82 IRIMWSQRDP----SLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCK 129
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 95 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 154
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 155 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 186
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 95 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 154
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 155 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 186
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 95 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 154
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 155 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 186
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 164 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 223
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 224 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 255
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 47.6 bits (108), Expect = 4e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYG 356
Q ++ + +P +L V+ IP + +F GKI ++I N +G+G
Sbjct: 94 QQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFG 153
Query: 357 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
FV +E DA++AR +G +++G+ ++V+ A
Sbjct: 154 FVTFENSADADRAREKLHGTVVEGRKIEVNNA 185
>AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma
antigen SART-3 protein.
Length = 963
Score = 47.6 bits (108), Expect = 4e-05
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDA 386
+T++ KL ++ +P T++ + + A G ++ +L+ NR G +VEYE A
Sbjct: 795 STSLEKHKLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQA 854
Query: 387 EKARAAFNGLLMQGKTLKVSXALLN-PENKVSHKPDT 494
+A +G+ ++ +KV A+ N P+ KV KP+T
Sbjct: 855 SQAVMKMDGMTIKENIIKV--AISNPPQRKVPEKPET 889
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 46.8 bits (106), Expect = 7e-05
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +3
Query: 168 SNNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN- 344
++ +++ EN G + +P +L V+ IP + +F GKI ++I N
Sbjct: 91 TDGQQSQTQSSENSEGKS----TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE 146
Query: 345 ---RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 147 RGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 185
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 209 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 268
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 269 MNLFDLGGQYLRVGKAVTPP 288
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 125 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 184
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 185 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 236
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 237 CTLARDPTTGK 247
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 227 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 286
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 287 MNLFDLGGQYLRVGKAVTPP 306
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 143 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 202
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 203 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 254
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 255 CTLARDPTTGK 265
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 93 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 152
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 153 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 211
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 184 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 243
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 244 MNLFDLGGQYLRVGKAVTPP 263
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 100 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 159
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 160 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 211
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 212 CTLARDPTTGK 222
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 184 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 243
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 244 MNLFDLGGQYLRVGKAVTPP 263
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 100 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 159
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 160 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 211
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 212 CTLARDPTTGK 222
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 167 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 226
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 227 MNLFDLGGQYLRVGKAVTPP 246
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 83 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 142
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 143 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 194
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 195 CTLARDPTTGK 205
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 210 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 269
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 270 MNLFDLGGQYLRVGKAVTPP 289
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 126 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 185
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 186 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 237
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 238 CTLARDPTTGK 248
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 73 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 132
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 133 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 191
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 93 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 152
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 153 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 211
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 210 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 269
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 270 MNLFDLGGQYLRVGKAVTPP 289
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 126 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 185
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 186 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 237
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 238 CTLARDPTTGK 248
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 224 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 283
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 284 MNLFDLGGQYLRVGKAVTPP 303
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 140 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 199
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 200 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 251
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 252 CTLARDPTTGK 262
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 46.4 bits (105), Expect = 9e-05
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAA 404
++ V + + ++ D + ++F A GKI+SC L + +GYGF+EYEK + ++ A ++
Sbjct: 227 RIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSS 286
Query: 405 FNGLLMQGKTLKVSXALLNP 464
N + G+ L+V A+ P
Sbjct: 287 MNLFDLGGQYLRVGKAVTPP 306
Score = 41.5 bits (93), Expect = 0.003
Identities = 31/131 (23%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 282 DMMYALFSAMGKIESCKL------IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
D + F+ G I+S + + ++G+ FVEYE E A+ A N +++ G+ +KV
Sbjct: 143 DTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV 202
Query: 444 ----SXALLNPE-NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+ P ++++ + + +Y++++ D++ + + ++F FG I +
Sbjct: 203 GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKS-------- 254
Query: 609 LCLLRDPATGR 641
L RDP TG+
Sbjct: 255 CTLARDPTTGK 265
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 93 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 152
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 153 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 211
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 93 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 152
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 153 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 211
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 93 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 152
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 153 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 211
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 93 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 152
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 153 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 211
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 53 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 112
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 113 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 171
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 46.4 bits (105), Expect = 9e-05
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 114 SEQRPXXXXXXXXXXXXXSNNKRTMQNDMENGGGDANT-NVS-PTKLMVNYIPELMTRDM 287
SEQ P + + NT N S P +L V+ IP
Sbjct: 93 SEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPD 152
Query: 288 MYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+ +F GKI ++I N +G+GFV +E DA++AR +G +++G+ ++V+ A
Sbjct: 153 LRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNA 211
>Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55
protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containing,
octamer-binding protein.
Length = 471
Score = 46.0 bits (104), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL 419
++L V +P +T + M LF GK + ++G+GF+ E AE A+ + +
Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++GK L+V A H ++L + NLP ++ E L FS FG + + V
Sbjct: 134 LRGKQLRVRFA--------CH----SASLTVRNLPQYVSNELLEEAFSVFGQVERAVV 179
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 46.0 bits (104), Expect = 1e-04
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 404
P +L V+ IP + +F GKI ++I N +G+GFV +E DA++AR
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 175
Query: 405 FNGLLMQGKTLKVSXA 452
+G +++G+ ++V+ A
Sbjct: 176 LHGTVVEGRKIEVNNA 191
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 45.2 bits (102), Expect = 2e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G G P +L V + +T DM+ +F GKI++ L+ +
Sbjct: 230 NRLAAMANNLQKGNG------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSD 283
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A +A NG + G+ ++V
Sbjct: 284 TGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
Score = 31.9 bits (69), Expect = 2.1
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA--- 452
FSA+GK+ ++I++R G +VE+ + + A G + G + V +
Sbjct: 170 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA-IGLTGQRLLGVPIIVQASQAE 228
Query: 453 ---LLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLR 623
L N + LY+ +L ++T + L +F PFG I N + L++
Sbjct: 229 KNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDN--------IVLMK 280
Query: 624 DPATGR 641
D TGR
Sbjct: 281 DSDTGR 286
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 45.2 bits (102), Expect = 2e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G G P +L V + +T DM+ +F GKI++ L+ +
Sbjct: 230 NRLAAMANNLQKGNG------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSD 283
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A +A NG + G+ ++V
Sbjct: 284 TGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
Score = 31.9 bits (69), Expect = 2.1
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA--- 452
FSA+GK+ ++I++R G +VE+ + + A G + G + V +
Sbjct: 170 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA-IGLTGQRLLGVPIIVQASQAE 228
Query: 453 ---LLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLR 623
L N + LY+ +L ++T + L +F PFG I N + L++
Sbjct: 229 KNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDN--------IVLMK 280
Query: 624 DPATGR 641
D TGR
Sbjct: 281 DSDTGR 286
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 45.2 bits (102), Expect = 2e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G G P +L V + +T DM+ +F GKI++ L+ +
Sbjct: 212 NRLAAMANNLQKGNG------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSD 265
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A +A NG + G+ ++V
Sbjct: 266 TGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 302
Score = 31.9 bits (69), Expect = 2.1
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA--- 452
FSA+GK+ ++I++R G +VE+ + + A G + G + V +
Sbjct: 152 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA-IGLTGQRLLGVPIIVQASQAE 210
Query: 453 ---LLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLR 623
L N + LY+ +L ++T + L +F PFG I N + L++
Sbjct: 211 KNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDN--------IVLMK 262
Query: 624 DPATGR 641
D TGR
Sbjct: 263 DSDTGR 268
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 45.2 bits (102), Expect = 2e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G G P +L V + +T DM+ +F GKI++ L+ +
Sbjct: 224 NRLAAMANNLQKGNG------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSD 277
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYGF+ + E A +A NG + G+ ++V
Sbjct: 278 TGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 314
Score = 31.9 bits (69), Expect = 2.1
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA--- 452
FSA+GK+ ++I++R G +VE+ + + A G + G + V +
Sbjct: 164 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA-IGLTGQRLLGVPIIVQASQAE 222
Query: 453 ---LLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLR 623
L N + LY+ +L ++T + L +F PFG I N + L++
Sbjct: 223 KNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDN--------IVLMK 274
Query: 624 DPATGR 641
D TGR
Sbjct: 275 DSDTGR 280
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D + S + V IP T + + +FS +G + S +L+ +R GYGF EY+
Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXA 452
E A A NG G+ L+V A
Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNA 92
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D + S + V IP T + + +FS +G + S +L+ +R GYGF EY+
Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXA 452
E A A NG G+ L+V A
Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNA 92
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/117 (29%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T D LF+ G+ + +G+GF++ E AE A+A + M
Sbjct: 298 RLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPM 357
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+G+ L+V A +H + L + NL P ++ E L FS FG I + V
Sbjct: 358 RGRQLRVRFA--------TH----AAALSVRNLSPYVSNELLEEAFSQFGPIERAVV 402
>X16105-1|CAA34231.1| 325|Homo sapiens protein ( Human mRNA for RD
protein, RNA-binding. ).
Length = 325
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 214 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 273
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 274 IARKQPMLDAATGKSVWGSLAVQNSP 299
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D + S + V IP T + + +FS +G + S +L+ +R GYGF EY+
Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXA 452
E A A NG G+ L+V A
Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNA 92
>L03411-1|AAC37523.1| 380|Homo sapiens RD protein protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/117 (26%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T + LF G+ + +RG+GF+ E AE A+A +G ++
Sbjct: 47 RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTIL 106
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + L++ A +H + L + NL P ++ E L FS FG + + V
Sbjct: 107 KSRPLRIRFA--------TH----GAALTVKNLSPVVSNELLEQAFSQFGPVEKAVV 151
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 42.7 bits (96), Expect = 0.001
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-- 344
N M N+++ G G P +L V + +T DM+ +F GKI++ L+ +
Sbjct: 230 NRLAAMANNLQKGNG------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSD 283
Query: 345 ----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+GYG + + E A +A NG + G+ ++V
Sbjct: 284 TGRSKGYGLITFSDSECARRALEQLNGFELAGRPMRV 320
Score = 31.9 bits (69), Expect = 2.1
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA--- 452
FSA+GK+ ++I++R G +VE+ + + A G + G + V +
Sbjct: 170 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA-IGLTGQRLLGVPIIVQASQAE 228
Query: 453 ---LLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLR 623
L N + LY+ +L ++T + L +F PFG I N + L++
Sbjct: 229 KNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDN--------IVLMK 280
Query: 624 DPATGR 641
D TGR
Sbjct: 281 DSDTGR 286
>BX005143-9|CAM25865.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D + S + V IP T + + +FS +G + S +L+ +R GYGF EY+
Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXA 452
E A A NG G+ L+V A
Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNA 92
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/117 (29%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T D LF+ G+ + +G+GF++ E AE A+A + M
Sbjct: 298 RLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPM 357
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+G+ L+V A +H + L + NL P ++ E L FS FG I + V
Sbjct: 358 RGRQLRVRFA--------TH----AAALSVRNLSPYVSNELLEEAFSQFGPIERAVV 402
>BC050617-1|AAH50617.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D + S + V IP T + + +FS +G + S +L+ +R GYGF EY+
Sbjct: 7 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 66
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXA 452
E A A NG G+ L+V A
Sbjct: 67 ETALSAMRNLNGREFSGRALRVDNA 91
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 407
+ V IP T + + +FS +G + S +L+ +R GYGF EY+ E A A
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 408 NGLLMQGKTLKVSXA 452
NG G+ L+V A
Sbjct: 78 NGREFSGRALRVDNA 92
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/117 (29%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T D LF+ G+ + +G+GF++ E AE A+A + M
Sbjct: 298 RLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPM 357
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+G+ L+V A +H + L + NL P ++ E L FS FG I + V
Sbjct: 358 RGRQLRVRFA--------TH----AAALSVRNLSPYVSNELLEEAFSQFGPIERAVV 402
>BC025235-1|AAH25235.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
D + S + V IP T + + +FS +G + S +L+ +R GYGF EY+
Sbjct: 8 DPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXA 452
E A A NG G+ L+V A
Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNA 92
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/117 (26%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T + LF G+ + +RG+GF+ E AE A+A +G ++
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTIL 142
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + L++ A +H + L + NL P ++ E L FS FG + + V
Sbjct: 143 KSRPLRIRFA--------TH----GAALTVKNLSPVVSNELLEQAFSQFGPVEKAVV 187
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/117 (29%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T D LF+ G+ + +G+GF++ E AE A+A + M
Sbjct: 225 RLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPM 284
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+G+ L+V A +H + L + NL P ++ E L FS FG I + V
Sbjct: 285 RGRQLRVRFA--------TH----AAALSVRNLSPYVSNELLEEAFSQFGPIERAVV 329
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 407
+ V IP T + + +FS +G + S +L+ +R GYGF EY+ E A A
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 408 NGLLMQGKTLKVSXA 452
NG G+ L+V A
Sbjct: 78 NGREFSGRALRVDNA 92
>AL844853-14|CAI41862.1| 333|Homo sapiens RD RNA binding protein
protein.
Length = 333
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 222 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 281
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 282 IARKQPMLDAATGKSVWGSLAVQNSP 307
>AL844853-13|CAI41861.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>AL662849-7|CAI17457.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>AL645922-8|CAI41728.1| 380|Homo sapiens RD RNA binding protein
protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 42.7 bits (96), Expect = 0.001
Identities = 34/117 (29%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T D LF+ G+ + +G+GF++ E AE A+A + M
Sbjct: 298 RLFVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPM 357
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+G+ L+V A +H + L + NL P ++ E L FS FG I + V
Sbjct: 358 RGRQLRVRFA--------TH----AAALSVRNLSPYVSNELLEEAFSQFGPIERAVV 402
>AL450998-14|CAH70862.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 42.7 bits (96), Expect = 0.001
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Frame = +3
Query: 279 RDMMYALFSAMGKIESCKL--IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+D ++ F GK+ S ++ + YG V + + ED EKA A G L G ++V+ A
Sbjct: 91 KDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVT-A 149
Query: 453 LLNPENKVSHK------------PDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+ PE + ++ P L+I NL T L +F FG I +
Sbjct: 150 WIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVD 205
>AL450998-10|CAH70858.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 42.7 bits (96), Expect = 0.001
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Frame = +3
Query: 279 RDMMYALFSAMGKIESCKL--IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+D ++ F GK+ S ++ + YG V + + ED EKA A G L G ++V+ A
Sbjct: 352 KDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVT-A 410
Query: 453 LLNPENKVSHK------------PDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+ PE + ++ P L+I NL T L +F FG I +
Sbjct: 411 WIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVD 466
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/117 (26%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T + LF G+ + +RG+GF+ E AE A+A +G ++
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTIL 142
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + L++ A +H + L + NL P ++ E L FS FG + + V
Sbjct: 143 KSRPLRIRFA--------TH----GAALTVKNLSPVVSNELLEQAFSQFGPVEKAVV 187
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/117 (26%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T + LF G+ + +RG+GF+ E AE A+A +G ++
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTIL 142
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + L++ A +H + L + NL P ++ E L FS FG + + V
Sbjct: 143 KSRPLRIRFA--------TH----GAALTVKNLSPVVSNELLEQAFSQFGPVEKAVV 187
>AL034555-6|CAI19528.1| 296|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 296
Score = 42.7 bits (96), Expect = 0.001
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Frame = +3
Query: 279 RDMMYALFSAMGKIESCKL--IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+D ++ F GK+ S ++ + YG V + + ED EKA A G L G ++V+ A
Sbjct: 91 KDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVT-A 149
Query: 453 LLNPENKVSHK------------PDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+ PE + ++ P L+I NL T L +F FG I +
Sbjct: 150 WIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVD 205
>AL034555-4|CAI19526.1| 3664|Homo sapiens SMART/HDAC1 associated
repressor protein (SHARP) protein.
Length = 3664
Score = 42.7 bits (96), Expect = 0.001
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Frame = +3
Query: 279 RDMMYALFSAMGKIESCKL--IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+D ++ F GK+ S ++ + YG V + + ED EKA A G L G ++V+ A
Sbjct: 352 KDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVT-A 410
Query: 453 LLNPENKVSHK------------PDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+ PE + ++ P L+I NL T L +F FG I +
Sbjct: 411 WIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVD 466
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 407
+ V IP T + + +FS +G + S +L+ +R GYGF EY+ E A A
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 408 NGLLMQGKTLKVSXA 452
NG G+ L+V A
Sbjct: 78 NGREFSGRALRVDNA 92
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/117 (26%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T + LF G+ + +RG+GF+ E AE A+A +G ++
Sbjct: 47 RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTIL 106
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + L++ A +H + L + NL P ++ E L FS FG + + V
Sbjct: 107 KSRPLRIRFA--------TH----GAALTVKNLSPVVSNELLEQAFSQFGPVEKAVV 151
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/117 (26%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T + LF G+ + +RG+GF+ E AE A+A +G ++
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTIL 142
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + L++ A +H + L + NL P ++ E L FS FG + + V
Sbjct: 143 KSRPLRIRFA--------TH----GAALTVKNLSPVVSNELLEQAFSQFGPVEKAVV 187
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/117 (26%), Positives = 55/117 (47%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
+L V +P +T + LF G+ + +RG+GF+ E AE A+A +G ++
Sbjct: 83 RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTIL 142
Query: 423 QGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ + L++ A +H + L + NL P ++ E L FS FG + + V
Sbjct: 143 KSRPLRIRFA--------TH----GAALTVKNLSPVVSNELLEQAFSQFGPVEKAVV 187
>AF356524-1|AAK52750.1| 3664|Homo sapiens nuclear receptor
transcription cofactor protein.
Length = 3664
Score = 42.7 bits (96), Expect = 0.001
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Frame = +3
Query: 279 RDMMYALFSAMGKIESCKL--IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
+D ++ F GK+ S ++ + YG V + + ED EKA A G L G ++V+ A
Sbjct: 352 KDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVT-A 410
Query: 453 LLNPENKVSHK------------PDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+ PE + ++ P L+I NL T L +F FG I +
Sbjct: 411 WIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVD 466
>AF019413-7|AAB67979.1| 380|Homo sapiens RD protein.
Length = 380
Score = 42.7 bits (96), Expect = 0.001
Identities = 27/86 (31%), Positives = 38/86 (44%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 269 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 328
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + +L + N P
Sbjct: 329 IARKQPMLDAATGKSVWGSLAVQNSP 354
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL- 419
KL + + E +T + +F+ S + + GY FV+ A KA F+G +
Sbjct: 3 KLYIGNLNESVTPADLEKVFAEHKISYSGQFLVKSGYAFVDCPDEHWAMKAIETFSGKVE 62
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+QGK L++ ++ P+ + S K + I N+PP + E L++L + +G + N
Sbjct: 63 LQGKRLEIEHSV--PKKQRSRK------IQIRNIPPQLRWEVLDSLLAQYGTVEN 109
>BC030025-1|AAH30025.1| 252|Homo sapiens TIAL1 protein protein.
Length = 252
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNY---IPELMTRDMMYALFSAMGKIESCKLIANR 347
K T +N+ + + N S K Y I +T +M FS G+I ++ +
Sbjct: 58 KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK 117
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLK 440
GY FV + HE A A + NG ++G +K
Sbjct: 118 GYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 148
Score = 34.3 bits (75), Expect = 0.39
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 16/100 (16%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNP----------------ENK 473
++GYGFV + DAE A G + G+ ++ + A P E+
Sbjct: 14 SKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDV 73
Query: 474 VSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
V+ +Y + +T + + FSPFG I RV
Sbjct: 74 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV 113
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL- 419
KL + + E +T + +F+ S + + GY FV+ A KA F+G +
Sbjct: 3 KLYIGNLNESVTPADLEKVFAEHKISYSGQFLVKSGYAFVDCPDEHWAMKAIETFSGKVE 62
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+QGK L++ ++ P+ + S K + I N+PP + E L++L + +G + N
Sbjct: 63 LQGKRLEIEHSV--PKKQRSRK------IQIRNIPPQLRWEVLDSLLAQYGTVEN 109
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAEKARAAFNG 413
K+ + IP + +++ +L + G +E+C+ + + V Y E +A NG
Sbjct: 82 KIQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETAVVNVTYSNREQTRQAIMKLNG 141
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPD 491
++ LKVS P+ +++ P+
Sbjct: 142 HQLENHALKVSYI---PDEQIAQGPE 164
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 42.3 bits (95), Expect = 0.001
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLL- 419
KL + + E +T + +F+ S + + GY FV+ A KA F+G +
Sbjct: 3 KLYIGNLNESVTPADLEKVFAEHKISYSGQFLVKSGYAFVDCPDEHWAMKAIETFSGKVE 62
Query: 420 MQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
+QGK L++ ++ P+ + S K + I N+PP + E L++L + +G + N
Sbjct: 63 LQGKRLEIEHSV--PKKQRSRK------IQIRNIPPQLRWEVLDSLLAQYGTVEN 109
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAEKARAAFNG 413
K+ + IP + +++ +L + G +E+C+ + + V Y E +A NG
Sbjct: 82 KIQIRNIPPQLRWEVLDSLLAQYGTVENCEQVNTESETAVVNVTYSNREQTRQAIMKLNG 141
Query: 414 LLMQGKTLKVSXALLNPENKVSHKPD 491
++ LKVS P+ +++ P+
Sbjct: 142 HQLENHALKVSYI---PDEQIAQGPE 164
>AB209260-1|BAD92497.1| 183|Homo sapiens TIA1 cytotoxic
granule-associated RNA-binding protein-like 1 isoform 2
variant protein.
Length = 183
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNY---IPELMTRDMMYALFSAMGKIESCKLIANR 347
K T +N+ + + N S K Y I +T +M FS G+I ++ +
Sbjct: 60 KSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK 119
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLK 440
GY FV + HE A A + NG ++G +K
Sbjct: 120 GYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 150
Score = 34.3 bits (75), Expect = 0.39
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 16/100 (16%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNP----------------ENK 473
++GYGFV + DAE A G + G+ ++ + A P E+
Sbjct: 16 SKGYGFVSFYNKLDAENAIVHMGGQWLGGRKIRTNWATRKPPAPKSTQENNTKQLRFEDV 75
Query: 474 VSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
V+ +Y + +T + + FSPFG I RV
Sbjct: 76 VNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRV 115
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V IP T + + +FS +G + S +L+ +R GYGF EY+ E A A NG
Sbjct: 11 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 70
Query: 414 LLMQGKTLKVSXA 452
G+ L+V A
Sbjct: 71 REFSGRALRVDNA 83
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKA 395
PTK+ + + +T+D + +FS GKI+ + R GY +VE+E ++AEKA
Sbjct: 160 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA 219
Query: 396 RAAFNGLLMQGKTLKVSXAL 455
+G + G+ + + L
Sbjct: 220 LKHMDGGQIDGQEITATAVL 239
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKA 395
PTK+ + + +T+D + +FS GKI+ + R GY +VE+E ++AEKA
Sbjct: 160 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA 219
Query: 396 RAAFNGLLMQGKTLKVSXAL 455
+G + G+ + + L
Sbjct: 220 LKHMDGGQIDGQEITATAVL 239
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKA 395
PTK+ + + +T+D + +FS GKI+ + R GY +VE+E ++AEKA
Sbjct: 160 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA 219
Query: 396 RAAFNGLLMQGKTLKVSXAL 455
+G + G+ + + L
Sbjct: 220 LKHMDGGQIDGQEITATAVL 239
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKA 395
PTK+ + + +T+D + +FS GKI+ + R GY +VE+E ++AEKA
Sbjct: 160 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA 219
Query: 396 RAAFNGLLMQGKTLKVSXAL 455
+G + G+ + + L
Sbjct: 220 LKHMDGGQIDGQEITATAVL 239
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKA 395
PTK+ + + +T+D + +FS GKI+ + R GY +VE+E ++AEKA
Sbjct: 137 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA 196
Query: 396 RAAFNGLLMQGKTLKVSXAL 455
+G + G+ + + L
Sbjct: 197 LKHMDGGQIDGQEITATAVL 216
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKA 395
PTK+ + + +T+D + +FS GKI+ + R GY +VE+E ++AEKA
Sbjct: 83 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA 142
Query: 396 RAAFNGLLMQGKTLKVSXAL 455
+G + G+ + + L
Sbjct: 143 LKHMDGGQIDGQEITATAVL 162
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKA 395
PTK+ + + +T+D + +FS GKI+ + R GY +VE+E ++AEKA
Sbjct: 160 PTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKA 219
Query: 396 RAAFNGLLMQGKTLKVSXAL 455
+G + G+ + + L
Sbjct: 220 LKHMDGGQIDGQEITATAVL 239
>BX005143-10|CAM25866.1| 334|Homo sapiens RD RNA binding protein
protein.
Length = 334
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 264 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 323
Query: 447 XALLNP 464
A P
Sbjct: 324 IARKQP 329
>AL662849-8|CAM24860.1| 334|Homo sapiens RD RNA binding protein
protein.
Length = 334
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 264 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 323
Query: 447 XALLNP 464
A P
Sbjct: 324 IARKQP 329
>AL645922-9|CAM25396.1| 334|Homo sapiens RD RNA binding protein
protein.
Length = 334
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LKV+
Sbjct: 264 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVN 323
Query: 447 XALLNP 464
A P
Sbjct: 324 IARKQP 329
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALF--SAMGKIESCKLIANRGYGFV 362
QN GG ++ + L+++ + T + + +F + K+ + ++GY F+
Sbjct: 469 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI 528
Query: 363 EYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLE 542
E+ EDA++A + N ++G+ +++ L P + + L++ L D T E
Sbjct: 529 EFASFEDAKEALNSCNKREIEGRAIRLE--LQGPRGSPNARSQPSKTLFVKGLSEDTTEE 586
Query: 543 RLNTLF 560
L F
Sbjct: 587 TLKESF 592
Score = 37.9 bits (84), Expect = 0.031
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +3
Query: 345 RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLP 524
R +G+V++E ED EKA GL + G +K L P+ K S K L NLP
Sbjct: 347 RKFGYVDFESAEDLEKA-LELTGLKVFGNEIK----LEKPKGKDSKKERDARTLLAKNLP 401
Query: 525 PDMTLERLNTLFSPFGNI 578
+T + L +F I
Sbjct: 402 YKVTQDELKEVFEDAAEI 419
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 180 RTMQNDMENGGGDANTNVSPTK-LMVNYIPELMTRDMMYALF--SAMGKIESCKLI-ANR 347
R ++ +++ G N P+K L V + E T + + F S +I + + +++
Sbjct: 551 RAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSK 610
Query: 348 GYGFVEYEKHEDAEKA 395
G+GFV++ EDA++A
Sbjct: 611 GFGFVDFNSEEDAKEA 626
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.004
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDAEKARA 401
P KL + + M+ A+F G I LI +R G+ F+ +E DA+ A
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 402 AFNGLLMQGKTLKVSXA 452
NG + GK +KV A
Sbjct: 67 DMNGTSLHGKAIKVEQA 83
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALF--SAMGKIESCKLIANRGYGFV 362
QN GG ++ + L+++ + T + + +F + K+ + ++GY F+
Sbjct: 241 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI 300
Query: 363 EYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLE 542
E+ EDA++A + N ++G+ +++ L P + + L++ L D T E
Sbjct: 301 EFASFEDAKEALNSCNKREIEGRAIRLE--LQGPRGSPNARSQPSKTLFVKGLSEDTTEE 358
Query: 543 RLNTLF 560
L F
Sbjct: 359 TLKESF 364
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 180 RTMQNDMENGGGDANTNVSPTK-LMVNYIPELMTRDMMYALF--SAMGKIESCKLI-ANR 347
R ++ +++ G N P+K L V + E T + + F S +I + + +++
Sbjct: 323 RAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSK 382
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
G+GFV++ EDA+ A+ A + G + + A
Sbjct: 383 GFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 417
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALF--SAMGKIESCKLIANRGYGFV 362
QN GG ++ + L+++ + T + + +F + K+ + ++GY F+
Sbjct: 241 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI 300
Query: 363 EYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLE 542
E+ EDA++A + N ++G+ +++ L P + + L++ L D T E
Sbjct: 301 EFASFEDAKEALNSCNKREIEGRAIRLE--LQGPRGSPNARSQPSKTLFVKGLSEDTTEE 358
Query: 543 RLNTLF 560
L F
Sbjct: 359 TLKESF 364
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 180 RTMQNDMENGGGDANTNVSPTK-LMVNYIPELMTRDMMYALF--SAMGKIESCKLI-ANR 347
R ++ +++ G N P+K L V + E T + + F S +I + + +++
Sbjct: 323 RAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSK 382
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
G+GFV++ EDA+ A+ A + G + + A
Sbjct: 383 GFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 417
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALF--SAMGKIESCKLIANRGYGFV 362
QN GG ++ + L+++ + T + + +F + K+ + ++GY F+
Sbjct: 241 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI 300
Query: 363 EYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLE 542
E+ EDA++A + N ++G+ +++ L P + + L++ L D T E
Sbjct: 301 EFASFEDAKEALNSCNKREIEGRAIRLE--LQGPRGSPNARSQPSKTLFVKGLSEDTTEE 358
Query: 543 RLNTLF 560
L F
Sbjct: 359 TLKESF 364
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 180 RTMQNDMENGGGDANTNVSPTK-LMVNYIPELMTRDMMYALF--SAMGKIESCKLI-ANR 347
R ++ +++ G N P+K L V + E T + + F S +I + + +++
Sbjct: 323 RAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSK 382
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
G+GFV++ EDA+ A+ A + G + + A
Sbjct: 383 GFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 417
>BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein.
Length = 669
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
K+ V + T + +LF G++ C ++ + Y FV EK DA+ A A NG +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 423 QGKTLKV 443
+GK + V
Sbjct: 138 KGKRINV 144
>AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif protein
14 variant protein.
Length = 669
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
K+ V + T + +LF G++ C ++ + Y FV EK DA+ A A NG +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 423 QGKTLKV 443
+GK + V
Sbjct: 138 KGKRINV 144
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALF--SAMGKIESCKLIANRGYGFV 362
QN GG ++ + L+++ + T + + +F + K+ + ++GY F+
Sbjct: 362 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI 421
Query: 363 EYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLE 542
E+ EDA++A + N ++G+ +++ L P + + L++ L D T E
Sbjct: 422 EFASFEDAKEALNSCNKREIEGRAIRLE--LQGPRGSPNARSQPSKTLFVKGLSEDTTEE 479
Query: 543 RLNTLF 560
L F
Sbjct: 480 TLKESF 485
Score = 37.9 bits (84), Expect = 0.031
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +3
Query: 345 RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLP 524
R +G+V++E ED EKA GL + G +K L P+ K S K L NLP
Sbjct: 240 RKFGYVDFESAEDLEKA-LELTGLKVFGNEIK----LEKPKGKDSKKERDARTLLAKNLP 294
Query: 525 PDMTLERLNTLFSPFGNI 578
+T + L +F I
Sbjct: 295 YKVTQDELKEVFEDAAEI 312
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 180 RTMQNDMENGGGDANTNVSPTK-LMVNYIPELMTRDMMYALF--SAMGKIESCKLI-ANR 347
R ++ +++ G N P+K L V + E T + + F S +I + + +++
Sbjct: 444 RAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSK 503
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
G+GFV++ EDA+ A+ A + G + + A
Sbjct: 504 GFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 538
>AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator
protein.
Length = 156
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
K+ V + T + +LF G++ C ++ + Y FV EK DA+ A A NG +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 423 QGKTLKV 443
+GK + V
Sbjct: 138 KGKRINV 144
>AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator
protein.
Length = 669
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
K+ V + T + +LF G++ C ++ + Y FV EK DA+ A A NG +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 423 QGKTLKV 443
+GK + V
Sbjct: 138 KGKRINV 144
>AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein
SIP protein.
Length = 669
Score = 40.7 bits (91), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLM 422
K+ V + T + +LF G++ C ++ + Y FV EK DA+ A A NG +
Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVV--KDYAFVHMEKEADAKAAIAQLNGKEV 137
Query: 423 QGKTLKV 443
+GK + V
Sbjct: 138 KGKRINV 144
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 189 QNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALF--SAMGKIESCKLIANRGYGFV 362
QN GG ++ + L+++ + T + + +F + K+ + ++GY F+
Sbjct: 469 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI 528
Query: 363 EYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLE 542
E+ EDA++A + N ++G+ +++ L P + + L++ L D T E
Sbjct: 529 EFASFEDAKEALNSCNKREIEGRAIRLE--LQGPRGSPNARSQPSKTLFVKGLSEDTTEE 586
Query: 543 RLNTLF 560
L F
Sbjct: 587 TLKESF 592
Score = 37.9 bits (84), Expect = 0.031
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = +3
Query: 345 RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLP 524
R +G+V++E ED EKA GL + G +K L P+ K S K L NLP
Sbjct: 347 RKFGYVDFESAEDLEKA-LELTGLKVFGNEIK----LEKPKGKDSKKERDARTLLAKNLP 401
Query: 525 PDMTLERLNTLFSPFGNI 578
+T + L +F I
Sbjct: 402 YKVTQDELKEVFEDAAEI 419
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 180 RTMQNDMENGGGDANTNVSPTK-LMVNYIPELMTRDMMYALF--SAMGKIESCKLI-ANR 347
R ++ +++ G N P+K L V + E T + + F S +I + + +++
Sbjct: 551 RAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSK 610
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
G+GFV++ EDA+ A+ A + G + + A
Sbjct: 611 GFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 645
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDAEKARA 401
P KL + + M+ A+F G I LI +R G+ F+ +E DA+ A
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 402 AFNGLLMQGKTLKVSXA 452
NG + GK +KV A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDAEKARA 401
P KL + + M+ A+F G I LI +R G+ F+ +E DA+ A
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 402 AFNGLLMQGKTLKVSXA 452
NG + GK +KV A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-----GYGFVEYEKHEDAEKARA 401
P KL + + M+ A+F G I LI +R G+ F+ +E DA+ A
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 402 AFNGLLMQGKTLKVSXA 452
NG + GK +KV A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 39.9 bits (89), Expect = 0.008
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 17/114 (14%)
Frame = +3
Query: 303 SAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPE 467
S +G S K+I + +G+GFV +E+HED + A NG G + A E
Sbjct: 33 SKVGPASSVKVITDEGGKSKGFGFVSFERHEDPQTAMDV-NGKEFSGNQTYICLAPKKVE 91
Query: 468 NKVSHKPDTE------------SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+ K E +N+ + NL + ERL FSPFG I ++ V
Sbjct: 92 EQTELKCKFEQMKQDRITRYQGANVCVKNLDESIDDERLQKEFSPFGIINSANV 145
Score = 34.7 bits (76), Expect = 0.29
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG----YGFVEYEKHED 383
D T + V + E + + + FS G I S ++ G +GFV + E+
Sbjct: 106 DRITRYQGANVCVKNLDESIDDERLQKEFSPFGIINSANVMMEGGCSKRFGFVCFSSPEE 165
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENKVSH 482
KA A NG ++ K L V+ A E +++H
Sbjct: 166 VAKAVTAMNGKIVASKPLHVALAQCK-EQRLAH 197
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 39.9 bits (89), Expect = 0.008
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +3
Query: 171 NNKRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI---- 338
N M N+++ G G P +L V + +T DM+ +F GKI++ L+
Sbjct: 230 NRLAAMANNLQKGNG------GPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSD 283
Query: 339 --ANRGYGFVEYEKHEDAEKARAAFN-GLLMQGKTLKV 443
++GYGF+ + E A +A GL + G+ ++V
Sbjct: 284 TGRSKGYGFITFSDSECARRACGTVEWGLSLLGRPMRV 321
Score = 31.9 bits (69), Expect = 2.1
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA--- 452
FSA+GK+ ++I++R G +VE+ + + A G + G + V +
Sbjct: 170 FSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLA-IGLTGQRLLGVPIIVQASQAE 228
Query: 453 ---LLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLR 623
L N + LY+ +L ++T + L +F PFG I N + L++
Sbjct: 229 KNRLAAMANNLQKGNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDN--------IVLMK 280
Query: 624 DPATGR 641
D TGR
Sbjct: 281 DSDTGR 286
>M33231-1|AAA36308.1| 382|Homo sapiens protein ( Human MHC class
III HLA-RD gene, exon 11. ).
Length = 382
Score = 39.5 bits (88), Expect = 0.010
Identities = 26/86 (30%), Positives = 36/86 (41%)
Frame = +3
Query: 267 ELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVS 446
E MT ++ FS G I + R FV YEK E A++A A NG ++ LK +
Sbjct: 271 EDMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAAAELNGTQVESVQLKDN 330
Query: 447 XALLNPENKVSHKPDTESNLYISNLP 524
A P + L + N P
Sbjct: 331 IARKQPMLDAATGKSVWGALAVQNSP 356
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKA 395
D T L V + +T +++ FS GK+E K + + Y F+ +++ + A KA
Sbjct: 295 DHKTAAQVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKL--KDYAFIHFDERDGAVKA 352
Query: 396 RAAFNGLLMQGKTLKVSXA 452
NG ++G+ +++ A
Sbjct: 353 MEEMNGKDLEGENIEIVFA 371
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA------NRGYGFVEYEKHEDAEKARA 401
T++ V IP + D + LF G I +L+ NRGY FV + E A++A
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 402 AFNG-LLMQGKTLKVSXALLNPENKVSHKPDTES 500
+N + GK + V ++ N V P +++
Sbjct: 222 LYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKA 395
D T L V + +T +++ FS GK+E K + + Y F+ +++ + A KA
Sbjct: 295 DHKTAAQVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKL--KDYAFIHFDERDGAVKA 352
Query: 396 RAAFNGLLMQGKTLKVSXA 452
NG ++G+ +++ A
Sbjct: 353 MEEMNGKDLEGENIEIVFA 371
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA------NRGYGFVEYEKHEDAEKARA 401
T++ V IP + D + LF G I +L+ NRGY FV + E A++A
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 402 AFNG-LLMQGKTLKVSXALLNPENKVSHKPDTES 500
+N + GK + V ++ N V P +++
Sbjct: 222 LYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
>Z97632-6|CAI42404.1| 244|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 244
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
D +N+Y+S LPPD+T++ L S FG I ++ +++ L +D
Sbjct: 130 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD 175
>Z97632-5|CAI42403.1| 223|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 223
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
D +N+Y+S LPPD+T++ L S FG I ++ +++ L +D
Sbjct: 130 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD 175
>Z97632-4|CAB10730.1| 755|Homo sapiens HIV-1 Tat specific factor 1
protein.
Length = 755
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
D +N+Y+S LPPD+T++ L S FG I ++ +++ L +D
Sbjct: 130 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD 175
>U76992-1|AAB18823.1| 754|Homo sapiens Tat-SF1 protein.
Length = 754
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
D +N+Y+S LPPD+T++ L S FG I ++ +++ L +D
Sbjct: 130 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD 175
>L38696-1|AAC28898.1| 291|Homo sapiens autoantigen p542 protein.
Length = 291
Score = 39.1 bits (87), Expect = 0.014
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 270 LMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSX 449
L+ + + +FS G++ C + ++GY FV+Y A A NG ++ G+TL ++
Sbjct: 32 LVKKSDVETIFSKYGRVAGCSV--HKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
Query: 450 A 452
A
Sbjct: 90 A 90
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 39.1 bits (87), Expect = 0.014
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPE-NKVSHKPDTE-----SN 503
NRG+ F+EYE H+ A +AR LM GK +KV ++ E +PD E
Sbjct: 250 NRGFCFLEYEDHKSAAQARRR----LMSGK-VKVWGNVVTVEWADPVEEPDPEVMAKVKV 304
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
L++ NL +T E L FS FG + + + Y D
Sbjct: 305 LFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFED 345
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
L V + +T +++ FS GK+E K + + Y FV +E A KA NG ++
Sbjct: 305 LFVRNLATTVTEEILEKSFSEFGKLERVKKL--KDYAFVHFEDRGAAVKAMDEMNGKEIE 362
Query: 426 GKTLKVSXALLNPENK 473
G+ +++ L P +K
Sbjct: 363 GEEIEI--VLAKPPDK 376
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 39.1 bits (87), Expect = 0.014
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPE-NKVSHKPDTE-----SN 503
NRG+ F+EYE H+ A +AR LM GK +KV ++ E +PD E
Sbjct: 268 NRGFCFLEYEDHKSAAQARRR----LMSGK-VKVWGNVVTVEWADPVEEPDPEVMAKVKV 322
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
L++ NL +T E L FS FG + + + Y D
Sbjct: 323 LFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFED 363
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
L V + +T +++ FS GK+E K + + Y FV +E A KA NG ++
Sbjct: 323 LFVRNLATTVTEEILEKSFSEFGKLERVKKL--KDYAFVHFEDRGAAVKAMDEMNGKEIE 380
Query: 426 GKTLKVSXALLNPENK 473
G+ +++ L P +K
Sbjct: 381 GEEIEI--VLAKPPDK 394
Score = 31.1 bits (67), Expect = 3.6
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA------NRGYGFVEYEKHEDAEKA-R 398
T++ V IP + D + LF G I +L+ NRGY F+ + E A++A +
Sbjct: 142 TEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVK 201
Query: 399 AAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI 578
+ + GK L V ++ N + L++ ++P + T E + FS +
Sbjct: 202 LCDSYEIRPGKHLGVCISVAN------------NRLFVGSIPKNKTKENILEEFSKVTGL 249
Query: 579 TNSRV 593
T V
Sbjct: 250 TEGLV 254
>BT006886-1|AAP35532.1| 755|Homo sapiens HIV TAT specific factor 1
protein.
Length = 755
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
D +N+Y+S LPPD+T++ L S FG I ++ +++ L +D
Sbjct: 130 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD 175
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 39.1 bits (87), Expect = 0.014
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPE-NKVSHKPDTE-----SN 503
NRG+ F+EYE H+ A +AR LM GK +KV ++ E +PD E
Sbjct: 262 NRGFCFLEYEDHKSAAQARRR----LMSGK-VKVWGNVVTVEWADPVEEPDPEVMAKVKV 316
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
L++ NL +T E L FS FG + + + Y D
Sbjct: 317 LFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFED 357
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
L V + +T +++ FS GK+E K + + Y FV +E A KA NG ++
Sbjct: 317 LFVRNLATTVTEEILEKSFSEFGKLERVKKL--KDYAFVHFEDRGAAVKAMDEMNGKEIE 374
Query: 426 GKTLKVSXALLNPENK 473
G+ +++ L P +K
Sbjct: 375 GEEIEI--VLAKPPDK 388
>BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 306
Score = 39.1 bits (87), Expect = 0.014
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 270 LMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSX 449
L+ + + +FS G++ C + ++GY FV+Y A A NG ++ G+TL ++
Sbjct: 32 LVKKSDVETIFSKYGRVAGCSV--HKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
Query: 450 A 452
A
Sbjct: 90 A 90
>BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein,
autoantigenic (hnRNP-associated with lethal yellow
homolog protein.
Length = 307
Score = 39.1 bits (87), Expect = 0.014
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 270 LMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSX 449
L+ + + +FS G++ C + ++GY FV+Y A A NG ++ G+TL ++
Sbjct: 32 LVKKSDVETIFSKYGRVAGCSV--HKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINM 89
Query: 450 A 452
A
Sbjct: 90 A 90
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
L V + +T +++ FS GK+E K + + Y F+ +++ + A KA NG ++
Sbjct: 376 LFVRNLANTVTEEILEKAFSQFGKLERVKKL--KDYAFIHFDERDGAVKAMEEMNGKDLE 433
Query: 426 GKTLKVSXALLNPENKVSHK 485
G+ +++ A P+ K K
Sbjct: 434 GENIEIVFA-KPPDQKKKKK 452
Score = 38.3 bits (85), Expect = 0.024
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Frame = +3
Query: 228 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI--------ANRGYGFVEYEKHED 383
+V+ +L V IP+ T++ + FS + + + ++ NRG+ F+EYE H+
Sbjct: 275 SVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKT 334
Query: 384 AEKARAAFNGLLMQGK--------TLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTL 539
A +AR LM GK T++ + + +P+ +V K L++ NL +T
Sbjct: 335 AAQARRR----LMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKV---LFVRNLANTVTE 387
Query: 540 ERLNTLFSPFGNITNSRVSQXY 605
E L FS FG + + + Y
Sbjct: 388 EILEKAFSQFGKLERVKKLKDY 409
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA------NRGYGFVEYEKHEDAEKARA 401
T++ V IP + D + LF G I +L+ NRGY FV + E A++A
Sbjct: 198 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 257
Query: 402 AFNG-LLMQGKTLKVSXALLNPENKVSHKPDTES 500
+N + GK + V ++ N V P +++
Sbjct: 258 LYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 291
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 39.1 bits (87), Expect = 0.014
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
L V + +T +++ FS GK+E K + + Y F+ +++ + A KA NG ++
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKL--KDYAFIHFDERDGAVKAMEEMNGKDLE 397
Query: 426 GKTLKVSXALLNPENKVSHK 485
G+ +++ A P+ K K
Sbjct: 398 GENIEIVFA-KPPDQKKKKK 416
Score = 38.3 bits (85), Expect = 0.024
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Frame = +3
Query: 228 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI--------ANRGYGFVEYEKHED 383
+V+ +L V IP+ T++ + FS + + + ++ NRG+ F+EYE H+
Sbjct: 239 SVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKT 298
Query: 384 AEKARAAFNGLLMQGK--------TLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTL 539
A +AR LM GK T++ + + +P+ +V K L++ NL +T
Sbjct: 299 AAQARRR----LMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKV---LFVRNLANTVTE 351
Query: 540 ERLNTLFSPFGNITNSRVSQXY 605
E L FS FG + + + Y
Sbjct: 352 EILEKAFSQFGKLERVKKLKDY 373
Score = 33.5 bits (73), Expect = 0.67
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA------NRGYGFVEYEKHEDAEKARA 401
T++ V IP + D + LF G I +L+ NRGY FV + E A++A
Sbjct: 162 TEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK 221
Query: 402 AFNG-LLMQGKTLKVSXALLNPENKVSHKPDTES 500
+N + GK + V ++ N V P +++
Sbjct: 222 LYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKT 255
>BC009896-1|AAH09896.1| 755|Homo sapiens HIV-1 Tat specific factor
1 protein.
Length = 755
Score = 39.1 bits (87), Expect = 0.014
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
D +N+Y+S LPPD+T++ L S FG I ++ +++ L +D
Sbjct: 130 DRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKD 175
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 39.1 bits (87), Expect = 0.014
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPE-NKVSHKPDTE-----SN 503
NRG+ F+EYE H+ A +AR LM GK +KV ++ E +PD E
Sbjct: 291 NRGFCFLEYEDHKSAAQARRR----LMSGK-VKVWGNVVTVEWADPVEEPDPEVMAKVKV 345
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYRLCLLRD 626
L++ NL +T E L FS FG + + + Y D
Sbjct: 346 LFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFED 386
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
L V + +T +++ FS GK+E K + + Y FV +E A KA NG ++
Sbjct: 346 LFVRNLATTVTEEILEKSFSEFGKLERVKKL--KDYAFVHFEDRGAAVKAMDEMNGKEIE 403
Query: 426 GKTLKVSXALLNPENK 473
G+ +++ L P +K
Sbjct: 404 GEEIEI--VLAKPPDK 417
Score = 31.1 bits (67), Expect = 3.6
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA------NRGYGFVEYEKHEDAEKA-R 398
T++ V IP + D + LF G I +L+ NRGY F+ + E A++A +
Sbjct: 165 TEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVK 224
Query: 399 AAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI 578
+ + GK L V ++ N + L++ ++P + T E + FS +
Sbjct: 225 LCDSYEIRPGKHLGVCISVAN------------NRLFVGSIPKNKTKENILEEFSKVTGL 272
Query: 579 TNSRV 593
T V
Sbjct: 273 TEGLV 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,064,311
Number of Sequences: 237096
Number of extensions: 1842341
Number of successful extensions: 7055
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 5617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6723
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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