Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_N17
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 60 1e-09
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 60 1e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 59 2e-09
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 52 4e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 52 4e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 50 1e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 50 1e-06
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 50 1e-06
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 50 1e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 48 6e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 47 1e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 46 2e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 46 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 2e-05
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 46 3e-05
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 46 3e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 45 4e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 45 4e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 45 4e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 44 1e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 40 0.001
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 40 0.001
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 39 0.003
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 39 0.003
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 37 0.011
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 37 0.011
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 37 0.011
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.019
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.019
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 36 0.025
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.025
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 36 0.033
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 34 0.077
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.077
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 34 0.10
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 34 0.10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 34 0.10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 34 0.10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 34 0.10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 34 0.10
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 33 0.18
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 33 0.18
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 33 0.18
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.18
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.23
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.23
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.23
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.54
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 31 0.54
Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 31 0.94
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 31 0.94
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.94
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.94
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 31 0.94
Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.6
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 30 1.6
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 2.2
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 2.2
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 2.2
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 2.9
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 29 2.9
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 29 2.9
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 29 2.9
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 2.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 2.9
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 29 3.8
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 28 5.0
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 28 5.0
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 28 6.7
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 28 6.7
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 6.7
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 28 6.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 6.7
U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 28 6.7
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 28 6.7
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 28 6.7
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 27 8.8
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 27 8.8
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 27 8.8
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 27 8.8
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 109 bits (262), Expect = 2e-24
Identities = 56/126 (44%), Positives = 84/126 (66%), Gaps = 6/126 (4%)
Frame = +3
Query: 234 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKA 395
S T L++NY+P+ MT++ + +LF+++G+IESCKL+ ++ GYGFV Y + EDA +A
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 396 RAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGN 575
++FNGL +Q KT+KVS A + S+ SNLY+S +P MTL L ++F PFG
Sbjct: 100 VSSFNGLRLQNKTIKVSYA------RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQ 153
Query: 576 ITNSRV 593
I SR+
Sbjct: 154 IITSRI 159
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 380
+N + + L V+ IP+ MT + ++F G+I + +++++ +G GFV ++K +
Sbjct: 121 SNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKD 180
Query: 381 DAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKP 488
+A+ A NG + G + +++ N N S+ P
Sbjct: 181 EADVAIKTLNGSIPSGCSEQITVKFAN--NPASNNP 214
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +3
Query: 285 MMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
+++ LFS G I + K++ + +GY FV + +A A + NG + GKTL+V
Sbjct: 389 LLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 411 GLLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
G+L+ GK + V ++ +N+Y+ N E L LF+ FGNIT+
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITS 178
Query: 585 SRV 593
V
Sbjct: 179 CEV 181
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 407
T + V + ++ + LF+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 408 NGLLMQGKTLK--VSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLER 545
+ ++G LK V A E K E NLY+ NL + +
Sbjct: 210 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 269
Query: 546 LNTLFSPFGNITNSRV 593
L F +GNIT+++V
Sbjct: 270 LKKQFESYGNITSAKV 285
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 315
Query: 411 GLLMQGKTLKVSXA 452
++ K L V+ A
Sbjct: 316 SKMVCSKPLYVAIA 329
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 411 GLLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
G+L+ GK + V ++ +N+Y+ N E L LF+ FGNIT+
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITS 241
Query: 585 SRV 593
V
Sbjct: 242 CEV 244
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 407
T + V + ++ + LF+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 408 NGLLMQGKTLK--VSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLER 545
+ ++G LK V A E K E NLY+ NL + +
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 546 LNTLFSPFGNITNSRV 593
L F +GNIT+++V
Sbjct: 333 LKKQFESYGNITSAKV 348
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 368
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERL 548
++ DAE+A N + GK +++ + +P + S N++I NL + + +
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRS----GAGNIFIKNLDKVIDNKSI 136
Query: 549 NTLFSPFGNITNSRVS 596
FS FGNI + +V+
Sbjct: 137 YDTFSLFGNILSCKVA 152
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 411 GLLMQGKTLKVSXA 452
++ K L V+ A
Sbjct: 379 SKMVCSKPLYVAIA 392
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 411 GLLMQGKTLKVS--XALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
G+L+ GK + V ++ +N+Y+ N E L +F+ FGNIT+
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITS 241
Query: 585 SRV 593
V
Sbjct: 242 CEV 244
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 368
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERL 548
++ DAE+A N + GK +++ + +P + S N++I NL + + +
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRS----GAGNIFIKNLDKVIDNKSI 136
Query: 549 NTLFSPFGNITNSRVS 596
FS FGNI + +V+
Sbjct: 137 YDTFSLFGNILSCKVA 152
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 407
T + V + ++ + +F+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 408 NGLLMQGKTLK--VSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLER 545
+ ++G LK V A E K E NLY+ NL + +
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 546 LNTLFSPFGNITNSRV 593
L F +GNIT+++V
Sbjct: 333 LKKQFESYGNITSAKV 348
Score = 34.3 bits (75), Expect = 0.077
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 411 GLLMQGKTLKVS 446
++ K L V+
Sbjct: 379 SKMVCSKPLYVA 390
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAEK 392
N + P L V + +T D + LF+ +G + K+I +N Y FVE+ H A +
Sbjct: 40 NGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQ 99
Query: 393 ARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFG 572
A N L+ + +KV+ A+ + + ++++ +L ++ ++L F PFG
Sbjct: 100 ALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFG 159
Query: 573 NITNSRV 593
++++++V
Sbjct: 160 DVSDAKV 166
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Frame = +3
Query: 300 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLN 461
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ + A
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Query: 462 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 215 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRI 271
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 225 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 404
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 236 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 294
Query: 405 FNGLLMQGKTLKVS 446
N + G+ ++ S
Sbjct: 295 MNNQDVGGQLVRCS 308
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
+ + + ++ +Y FS G I SCK+ + +GYGFV +E A+ A N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 411 GLLMQGKTLKVSXALLNPE--NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
G+L+ K + V + ++ +N+++ N + E+L+ +FS FG IT+
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 585 SRV 593
+ V
Sbjct: 267 AVV 269
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V E + ++ + A+FS G+I S ++ + +G+GFV + + A +A
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 405 FNGLLMQGKTLKVSX--ALLNPENKVSHKPDTES------------NLYISNLPPDMTLE 542
N +++G K+S A E K E+ NLY+ N+ D+ +
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 543 RLNTLFSPFGNITNSRV 593
L FS FG IT+++V
Sbjct: 358 GLRDHFSSFGTITSAKV 374
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Frame = +3
Query: 204 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 365
N G N S L + + ++ M++ FS G + S ++ + GY +V
Sbjct: 45 NIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVN 104
Query: 366 YEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLER 545
+++ DAE+A N ++ G+ +++ + +P + + N++I NL + +
Sbjct: 105 FQQPADAERALDTMNFEVIHGRPMRIMWSQRDP----AARRAGNGNIFIKNLDRVIDNKS 160
Query: 546 LNTLFSPFGNITNSRVS 596
+ FS FGNI + +V+
Sbjct: 161 VYDTFSLFGNILSCKVA 177
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
L V I E + D + FS+ G I S K++ + +G+GFV +EK E+A A N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 411 GLLMQGKTLKVSXA 452
++ K L V+ A
Sbjct: 405 SKMIGAKPLYVALA 418
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
+ + + ++ +Y FS G I SCK+ + +GYGFV +E A+ A N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 411 GLLMQGKTLKVSXALLNPE--NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 584
G+L+ K + V + ++ +N+++ N + E+L+ +FS FG IT+
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 585 SRV 593
+ V
Sbjct: 267 AVV 269
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 404
T + V E + ++ + A+FS G+I S ++ + +G+GFV + + A +A
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 405 FNGLLMQGKTLKVSX--ALLNPENKVSHKPDTES------------NLYISNLPPDMTLE 542
N +++G K+S A E K E+ NLY+ N+ D+ +
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 543 RLNTLFSPFGNITNSRV 593
L FS FG IT+++V
Sbjct: 358 GLRDHFSSFGTITSAKV 374
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Frame = +3
Query: 204 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 365
N G N S L + + ++ M++ FS G + S ++ + GY +V
Sbjct: 45 NIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVN 104
Query: 366 YEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLER 545
+++ DAE+A N ++ G+ +++ + +P + + N++I NL + +
Sbjct: 105 FQQPADAERALDTMNFEVIHGRPMRIMWSQRDP----AARRAGNGNIFIKNLDRVIDNKS 160
Query: 546 LNTLFSPFGNITNSRVS 596
+ FS FGNI + +V+
Sbjct: 161 VYDTFSLFGNILSCKVA 177
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
L V I E + D + FS+ G I S K++ + +G+GFV +EK E+A A N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 411 GLLMQGKTLKVSXA 452
++ K L V+ A
Sbjct: 405 SKMIGAKPLYVALA 418
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 54.0 bits (124), Expect = 9e-08
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHED 383
NT S T L + + D++ + S G I S K I ++ GYGFV++E
Sbjct: 101 NTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFES--- 157
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFS 563
+ A AA +GL +G +++ K+ + +NLYI+NLP D T + L T +
Sbjct: 158 PQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 564 PFGNITNSRV 593
FG + ++R+
Sbjct: 210 KFGMVISTRI 219
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEKARA 401
PT L + +P T M+ + G + S +++ +RG GF + E E +
Sbjct: 187 PTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIIS 246
Query: 402 AFNG 413
A NG
Sbjct: 247 ALNG 250
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHED 383
+T +S T L + + D++ + S G I S K I ++ GYGFV++E
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFES--- 131
Query: 384 AEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFS 563
+ A AA +GL +G +++ K+ + +NLYI+NLP D T + L T +
Sbjct: 132 PQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFTEQMLETELN 183
Query: 564 PFGNITNSRV 593
FG + ++R+
Sbjct: 184 KFGMVISTRI 193
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEKARA 401
PT L + +P T M+ + G + S +++ +RG GF + E E +
Sbjct: 161 PTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIIS 220
Query: 402 AFNG 413
A NG
Sbjct: 221 ALNG 224
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 404
P +L V+ IP + A+F +G + ++I N +G+GFV + +DA++ARA
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 405 FNGLLMQGKTLKVSXALLNPENK 473
FNG ++G+ ++V+ A NK
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 404
P +L V+ IP + A+F +G + ++I N +G+GFV + +DA++ARA
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 405 FNGLLMQGKTLKVSXALLNPENK 473
FNG ++G+ ++V+ A NK
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 407
+ V + E ++ +++ L G + S + +R G+GFVE+ EDA+ A
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 408 NGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI 578
N + + GK +KV+ A + +N D +N+++ NL P++ + L FS FG I
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEVDEKLLYDTFSAFGVI 126
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 407
+ V + E ++ +++ L G + S + +R G+GFVE+ EDA+ A
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 408 NGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI 578
N + + GK +KV+ A + +N D +N+++ NL P++ + L FS FG I
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEVDEKLLYDTFSAFGVI 136
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Frame = +3
Query: 201 ENGGGDANTNVSPT-KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGF 359
ENG GDA+ K+ V + T D+M +S G+I ++ + RG+GF
Sbjct: 9 ENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGF 68
Query: 360 VEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTL 539
V + + + A ++ GKT+ A+ + S + LY+S + D T
Sbjct: 69 VTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTE 127
Query: 540 ERLNTLFSPFGNITNSRV 593
+ L F+ +G +T S +
Sbjct: 128 DMLTEYFTKYGTVTKSEI 145
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 344
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 96 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 152
Query: 345 --RGYGFVEYEKHEDAEK 392
RG+GFV ++ H+ ++
Sbjct: 153 KPRGFGFVTFDDHDSVDQ 170
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Frame = +3
Query: 201 ENGGGDANTNVSPT-KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGF 359
ENG GDA+ K+ V + T D+M +S G+I ++ + RG+GF
Sbjct: 9 ENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGF 68
Query: 360 VEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTL 539
V + + + A ++ GKT+ A+ + S + LY+S + D T
Sbjct: 69 VTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTE 127
Query: 540 ERLNTLFSPFGNITNSRV 593
+ L F+ +G +T S +
Sbjct: 128 DMLTEYFTKYGTVTKSEI 145
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 344
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 96 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 152
Query: 345 --RGYGFVEYEKHEDAEK 392
RG+GFV ++ H+ ++
Sbjct: 153 KPRGFGFVTFDDHDSVDQ 170
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Frame = +3
Query: 201 ENGGGDANTNVSPT-KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGF 359
ENG GDA+ K+ V + T D+M +S G+I ++ + RG+GF
Sbjct: 9 ENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGF 68
Query: 360 VEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTL 539
V + + + A ++ GKT+ A+ + S + LY+S + D T
Sbjct: 69 VTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTE 127
Query: 540 ERLNTLFSPFGNITNSRV 593
+ L F+ +G +T S +
Sbjct: 128 DMLTEYFTKYGTVTKSEI 145
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 344
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 96 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 152
Query: 345 --RGYGFVEYEKHEDAEK 392
RG+GFV ++ H+ ++
Sbjct: 153 KPRGFGFVTFDDHDSVDQ 170
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAA 404
++ V +IP + D + LF GKI +L+ A+RGY FV Y EDA A
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 405 FNG-LLMQGKTLKVSXALLNPENKVSHKPDTES 500
++G + GK LKV+ ++ N + + P T+S
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKS 293
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKA 395
D +T L + I E +T + + LF ++ K + + Y F+ + + +D KA
Sbjct: 369 DEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKV--KDYAFIHFNERDDCLKA 426
Query: 396 RAAFNGLLMQGKTLKVSXALLNPENKVSHKP 488
+NG ++G ++ S L P + KP
Sbjct: 427 MEEWNGKELEGTVVEAS--LAKPPQEKKKKP 455
Score = 34.3 bits (75), Expect = 0.077
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFS--AMGKIESC-------KLIANRGYGFVEYEK 374
N +++ T+L + IP+ ++D + A G ++ + I NRG+ FV++
Sbjct: 275 NVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVPDNEKIKNRGFCFVDFID 334
Query: 375 HEDAE--KARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESN---LYISNLPPDMTL 539
H+ A K + A + + + V A E++ DT S LYI N+ +T
Sbjct: 335 HKTASDIKRKIAQHKIRPFNADVYVDWA----EHQEEPDEDTMSKVKVLYIRNIKEAVTE 390
Query: 540 ERLNTLFSPFGNITNSRVSQXY 605
E+LN LF + ++ + + Y
Sbjct: 391 EKLNELFKEYASLDRVKKVKDY 412
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Frame = +3
Query: 219 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAE 389
A+ + P L V + +T + + LF+ +G + K+I N Y FVE+ H A
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQAT 92
Query: 390 KARAAFNGLLMQGKTLKVSXALLNPE-NKVSHKPDTES--NLYISNLPPDMTLERLNTLF 560
A + NG + K + V+ A E + KP+T ++++ +L ++ +L F
Sbjct: 93 LALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAF 152
Query: 561 SPFGNITNSRV 593
FG ++ +++
Sbjct: 153 VKFGEVSEAKI 163
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLN 461
F G++ K+I + +GYGFV Y + EDAE+A NG + +T++ + A
Sbjct: 152 FVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
Query: 462 PE 467
P+
Sbjct: 212 PD 213
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 404
P +L V+ IP + +F G + ++I N +G+GFV E+ +DAE+AR
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQE 211
Query: 405 FNGLLMQGKTLKVSXALLNPENK 473
+G +++G+ ++V+ A +K
Sbjct: 212 LHGSMIEGRKIEVNCATARVHSK 234
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 444 SXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
S A+ P+ S PD L++SN+P L T+F FG +++ +
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEI 184
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 404
P +L V+ IP + +F G + ++I N +G+GFV E+ +DAE+AR
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQE 211
Query: 405 FNGLLMQGKTLKVSXALLNPENK 473
+G +++G+ ++V+ A +K
Sbjct: 212 LHGSMIEGRKIEVNCATARVHSK 234
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 444 SXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
S A+ P+ S PD L++SN+P L T+F FG +++ +
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEI 184
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 407
T + V + ++ + LF+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 408 NGLLMQGKTLK--VSXALLNPENKVSHKPDTES------------NLYISNLPPDMTLER 545
+ ++G LK V A E K E NLY+ NL + +
Sbjct: 213 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 272
Query: 546 LNTLFSPFGNITNSRV 593
L F +GNIT+++V
Sbjct: 273 LKKQFESYGNITSAKV 288
Score = 35.9 bits (79), Expect = 0.025
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 368
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNL 521
++ DAE+A N + GK +++ + +P + S N++I NL
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRS----GAGNIFIKNL 127
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 410
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 318
Query: 411 GLLMQGKTLKVSXA 452
++ K L V+ A
Sbjct: 319 SKMVCSKPLYVAIA 332
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFN 410
++ V+ IP + A+F A G++ S +++ N +G+GFV + E EKARAA +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 411 GLLMQGKTLKVSXA-------LLNPENKVSHKP 488
+QG+ ++V A + NP+N+V P
Sbjct: 112 ESHVQGRIIEVRRATPTRRKLINNPQNEVLPPP 144
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFN 410
++ V+ IP + A+F A G++ S +++ N +G+GFV + E EKARAA +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 411 GLLMQGKTLKVSXA-------LLNPENKVSHKP 488
+QG+ ++V A + NP+N+V P
Sbjct: 112 ESHVQGRIIEVRRATPTRRKLINNPQNEVLPPP 144
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Frame = +3
Query: 273 MTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
++ +++ + F+ G++ K+I + +GYGFV + ++AE A A NG + +
Sbjct: 146 VSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRA 205
Query: 435 LKVSXALL--NPENK---------VSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT 581
++ + A + EN+ S K D S +Y+ N+ T L LFS +G+I
Sbjct: 206 VRTNWAARKNSEENRDKLTFEQVFNSTKADNTS-VYVGNISQQTTDADLRDLFSTYGDIA 264
Query: 582 NSRVSQXYRLCLLR 623
R+ + R +R
Sbjct: 265 EVRIFKTQRYAFVR 278
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARA 401
+T T + V I + T + LFS G I ++ + Y FV YEK E A KA
Sbjct: 231 STKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIM 290
Query: 402 AFNGLLMQGKTLKVSXALLN--PENKVSHKPDTESNLYISNLPP 527
NG M G ++ S P ++ P S+L + + P
Sbjct: 291 EMNGKEMAGNQVRCSWGRTQAVPNQALNPLPIDLSSLMMPTMLP 334
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = +3
Query: 297 LFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNP 464
+F +G + ++I N +G+GFV + +DA++ARA FNG ++G+ ++V+ A
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 465 ENK 473
NK
Sbjct: 61 HNK 63
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 401
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 402 AFNGLLMQGKTLKVSXALLN----PENKVSHKP-------DTES--NLYISNLPPDMTLE 542
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 543 RLNTLFSPFGNITNSRVSQ 599
L ++F FG I ++++
Sbjct: 222 DLKSVFEAFGEIVKCQLAR 240
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 426 GKTLK 440
G+ L+
Sbjct: 275 GQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 401
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 402 AFNGLLMQGKTLKVSXALLN----PENKVSHKP-------DTES--NLYISNLPPDMTLE 542
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 543 RLNTLFSPFGNITNSRVSQ 599
L ++F FG I ++++
Sbjct: 222 DLKSVFEAFGEIVKCQLAR 240
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 426 GKTLKVSXALLNPE 467
G+ L+V + P+
Sbjct: 275 GQYLRVGKCVTPPD 288
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 401
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 402 AFNGLLMQGKTLKVSXALLN----PENKVSHKP-------DTES--NLYISNLPPDMTLE 542
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 543 RLNTLFSPFGNITNSRVSQ 599
L ++F FG I ++++
Sbjct: 222 DLKSVFEAFGEIVKCQLAR 240
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +3
Query: 264 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 425
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 426 GKTLKVSXALLNPE 467
G+ L+V + P+
Sbjct: 275 GQYLRVGKCVTPPD 288
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Frame = +3
Query: 300 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLN 461
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ + A
Sbjct: 42 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101
Query: 462 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 102 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRI 158
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 225 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 404
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 123 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 181
Query: 405 FNGLLMQGKTLKVS 446
N + G+ ++ S
Sbjct: 182 MNNQDVGGQLVRCS 195
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Frame = +3
Query: 300 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLN 461
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ + A
Sbjct: 52 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Query: 462 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 112 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRI 168
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 225 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 404
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 133 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 191
Query: 405 FNGLLMQGKTLKVS 446
N + G+ ++ S
Sbjct: 192 MNNQDVGGQLVRCS 205
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/62 (19%), Positives = 34/62 (54%)
Frame = +3
Query: 408 NGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 587
N L+ + +KV+ A+ + + ++++ +L ++ ++L F PFG+++++
Sbjct: 2 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 61
Query: 588 RV 593
+V
Sbjct: 62 KV 63
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Frame = +3
Query: 300 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLN 461
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ + A
Sbjct: 123 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
Query: 462 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 183 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRI 239
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 225 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 404
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 204 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 262
Query: 405 FNGLLMQGKTLKVS 446
N + G+ ++ S
Sbjct: 263 MNNQDVGGQLVRCS 276
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
D LY+ NL +T + + TLF+ G++T ++V
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKV 77
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +3
Query: 255 NYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKT 434
N ++TRD + LF GKI + A +G+GFV++ + A+++ + NG+ +
Sbjct: 89 NIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGMSWKACC 148
Query: 435 LKVSXALLNPENKVSHKPDTESN 503
L V A+L K + + N
Sbjct: 149 LDVHLAMLGSLRKPTGNEGRQGN 171
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +3
Query: 234 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 398
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 399 AAFNGLLMQGKTLKVSXALLNPENKVSHKPDTES 500
A NG+ + K L V A N + ++ P++ S
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 382
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +3
Query: 234 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 398
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 399 AAFNGLLMQGKTLKVSXALLNPENKVSHKPDTES 500
A NG+ + K L V A N + ++ P++ S
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 382
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +3
Query: 234 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 398
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 264 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 323
Query: 399 AAFNGLLMQGKTLKVSXALLNPENKVSHKPDTES 500
A NG+ + K L V A N + ++ P++ S
Sbjct: 324 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 357
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +3
Query: 234 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 398
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 267 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 326
Query: 399 AAFNGLLMQGKTLKVSXALLNPENKVSHKPDTES 500
A NG+ + K L V A N + ++ P++ S
Sbjct: 327 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 360
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +3
Query: 234 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKA 395
S + V I ++ D + ++FS G + S K++ +R GYGF+E+ + AE A
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 396 RAAFNGLLMQGKTLKVSXA 452
NG + G+ L+V A
Sbjct: 76 IRNLNGYELSGRILRVDSA 94
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNL 521
+RG+GFV + + + A ++ GKT+ A+ + S + LY+S +
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 83
Query: 522 PPDMTLERLNTLFSPFGNITNSRV 593
D T + L F+ +G +T S +
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEI 107
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 344
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 58 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 114
Query: 345 --RGYGFVEYEKHEDAEK 392
RG+GFV ++ H+ ++
Sbjct: 115 KPRGFGFVTFDDHDSVDQ 132
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNL 521
+RG+GFV + + + A ++ GKT+ A+ + S + LY+S +
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 83
Query: 522 PPDMTLERLNTLFSPFGNITNSRV 593
D T + L F+ +G +T S +
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEI 107
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +3
Query: 177 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 344
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 58 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 114
Query: 345 --RGYGFVEYEKHEDAEK 392
RG+GFV ++ H+ ++
Sbjct: 115 KPRGFGFVTFDDHDSVDQ 132
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 345 RGYGFVEYEKHEDAEKARAAFNGLLMQG-KTLKVSXALLNPENKVSHKPDTESNLYISNL 521
+GY F+E+ ++A + NG + G K ++ + N S+ P++E NL++S++
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFNLCFAND----SYNPNSEFNLHVSSV 163
Query: 522 PPDMTLERLNTLFSPFGNITNSRV 593
P DM L +F + + +++
Sbjct: 164 PDDMADAELYRIFDKYQSCRGAKM 187
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +3
Query: 348 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENK-------VSHKPDTE-SN 503
G+GFV++ DA+ A G L+ G +L++ + +K V K E +
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTK 749
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRV 593
L + NLP + +++ + TLF FG + R+
Sbjct: 750 LLVRNLPFEASVKEVETLFETFGAVKTIRI 779
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 231 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEK 392
+S + V P T D + FS G + + +++ +R G+ FVE+ + A++
Sbjct: 1 MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQR 60
Query: 393 ARAAFNGLLMQGKTLKVSXA 452
A FNG+ G+ L+V+ A
Sbjct: 61 AVDQFNGVDFNGRALRVNLA 80
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 501 NLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
++Y+ N P T + L FS GN++N R+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRI 35
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V +P T + + F+A+G + + +++ +R G+ FVE+ + A++A NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 414 LLMQGKTLKVSXA 452
+ G+ L+V+ A
Sbjct: 70 VAFNGRNLRVNYA 82
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +3
Query: 336 IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDT---ESNL 506
+ +RG+ +V E + A++A + + ++G+ + +S +PE +V K T +S +
Sbjct: 629 LVHRGFAYVVMENDQKAQQALLK-DRVPVKGRPMFISAN--DPEKRVGFKFSTTLEKSKV 685
Query: 507 YISNLPPDMTLERLNTLFSPFGNITNSR 590
++ N+ T + L LFS FG +T+ R
Sbjct: 686 FVRNVHFQATDDELKALFSKFGTVTSVR 713
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG--YGFVEYEKHEDAEKARAAFNGL 416
K+ V +P + + +F G+I+ + + RG + FVE+E H DAE A A +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 417 LMQGKTLKV 443
G+ ++V
Sbjct: 70 EFDGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG--YGFVEYEKHEDAEKARAAFNGL 416
K+ V +P + + +F G+I+ + + RG + FVE+E H DAE A A +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 417 LMQGKTLKV 443
G+ ++V
Sbjct: 70 EFDGRRIRV 78
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 228 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEK 392
N PT ++V + + M+ +F + G+IE L NRG+ + + +DA+K
Sbjct: 123 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 182
Query: 393 ARAAFNGLLMQGKTLKVS 446
+ N + G+ +++S
Sbjct: 183 SCEQLNNFELAGRCIRLS 200
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 228 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEK 392
N PT ++V + + M+ +F + G+IE L NRG+ + + +DA+K
Sbjct: 268 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 327
Query: 393 ARAAFNGLLMQGKTLKVS 446
+ N + G+ +++S
Sbjct: 328 SCEQLNNFELAGRCIRLS 345
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V P T + + FS++G+I + +++ +R G+ F+E+ + A++A NG
Sbjct: 9 VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68
Query: 414 LLMQGKTLKVSXA 452
G+ L+V+ A
Sbjct: 69 AEFNGRPLRVNLA 81
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKP 488
+RG+GFVE++ EDA A N + GKT++V+ A + S KP
Sbjct: 51 HRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKP 99
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +3
Query: 219 ANTNVSPTK-LMVNYIPELMTRDMMYALFSAMGKIESCKLI-------ANRGYGFVEYEK 374
A + SP K +++ + + + + +FS G I++ L +RGYG+VEY+
Sbjct: 125 AARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDN 184
Query: 375 HEDAEKARAAFNGLLMQGKTLKVSXAL 455
EDAEK+ +G + G + V +
Sbjct: 185 LEDAEKSIKHMDGGQIDGMAVHVEMTI 211
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.077
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEYEKHEDAEKARAAF 407
L + ++P+ + +F+ G I S K+ +R +GFV Y+ ++ A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 408 NGLLMQGKTLKVSXALLNPENK 473
NG + K LKV L P N+
Sbjct: 491 NGFQIGMKRLKVQ--LKRPRNE 510
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 501 NLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
NL+I +LP + L +F+PFG+I +++V
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 34.3 bits (75), Expect = 0.077
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 407
+ V I E T D ++ FS GKI++ L +R GY VEYE ++A +A
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 408 NGLLMQGKTLKV 443
N + G+ +KV
Sbjct: 117 NDTDLLGQNVKV 128
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.077
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +3
Query: 246 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEYEKHEDAEKARAAF 407
L + ++P+ + +F+ G I S K+ +R +GFV Y+ ++ A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 408 NGLLMQGKTLKVSXALLNPENK 473
NG + K LKV L P N+
Sbjct: 491 NGFQIGMKRLKVQ--LKRPRNE 510
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 501 NLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
NL+I +LP + L +F+PFG+I +++V
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 413
V +P+ M D + LF +G++ + ++ G+ FV +E +DA +A A N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 414 LLMQGKTLKV 443
+ M LKV
Sbjct: 240 IRMYHMVLKV 249
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 368
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 325 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 383
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXAL--LNPENK 473
E + A A +A NG + K LKV + NP N+
Sbjct: 384 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 420
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+NL+I +LP D L F+PFG I +++V
Sbjct: 335 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 366
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 368
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXAL--LNPENK 473
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+NL+I +LP D L F+PFG I +++V
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 368
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXAL--LNPENK 473
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+NL+I +LP D L F+PFG I +++V
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 368
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 418 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 476
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXAL--LNPENK 473
E + A A +A NG + K LKV + NP N+
Sbjct: 477 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 513
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+NL+I +LP D L F+PFG I +++V
Sbjct: 428 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 459
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +3
Query: 207 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 368
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 369 EKHEDAEKARAAFNGLLMQGKTLKVSXAL--LNPENK 473
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+NL+I +LP D L F+PFG I +++V
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 233 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 292
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTE 497
+ E+A + +L+ + + V + +N +KP ++
Sbjct: 293 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 331
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 495 ESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
E+ L++ L P T E L +FS FG I N + + R
Sbjct: 240 ENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRR 277
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 233 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 292
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTE 497
+ E+A + +L+ + + V + +N +KP ++
Sbjct: 293 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 331
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 495 ESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
E+ L++ L P T E L +FS FG I N + + R
Sbjct: 240 ENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRR 277
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 216 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 377
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 164 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 223
Query: 378 EDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTE 497
+ E+A + +L+ + + V + +N +KP ++
Sbjct: 224 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 262
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 495 ESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
E+ L++ L P T E L +FS FG I N + + R
Sbjct: 171 ENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRR 208
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKARA 401
+L++ +P ++ + L S +GK L +R G+GF+++ + DAEK R
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 402 AFNGLLMQGKTLKVSXAL 455
FN + G+++ AL
Sbjct: 156 FFNTNKVLGRSVAADWAL 173
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +3
Query: 204 NGGGD---ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEK 374
NG G A T + +++ +P T ++ G+++S ++A G + +
Sbjct: 370 NGAGGLAGAATPQATRVIIIRNLPSDYTWQIVRDRVRNFGEVDSVDMMAP-GAARIRFAT 428
Query: 375 HEDAEKARAAFNGLLMQGKTLKVSXA 452
+DAE+ARAA G ++G+ + V A
Sbjct: 429 FQDAERARAALYGSTVEGRMISVDYA 454
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
++G+GFV + + DAE A +G L+ G+ L+V+ A
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXA 452
++G+GFV + + DAE A +G L+ G+ L+V+ A
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 450 ALLNPENKVSH-KPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
A+ N +N+ + P+ LYI NLP +T E + +F FG + RV
Sbjct: 2 AMANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRV 50
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 416
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 417 LMQGKTLKV 443
+ G +V
Sbjct: 63 RICGVRARV 71
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 495 ESNLYISNLPPDMTLERLNTLFSPFGNI 578
++ +Y+ LP D T + L +F FG I
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRI 29
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 416
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 417 LMQGKTLKV 443
+ G +V
Sbjct: 63 RICGVRARV 71
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 495 ESNLYISNLPPDMTLERLNTLFSPFGNI 578
++ +Y+ LP D T + L +F FG I
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRI 29
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 416
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 417 LMQGKTLKV 443
+ G +V
Sbjct: 63 RICGVRARV 71
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 495 ESNLYISNLPPDMTLERLNTLFSPFGNI 578
++ +Y+ LP D T + L +F FG I
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRI 29
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +3
Query: 228 NVSPTKLM-VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDA 386
N P+K + V + T + +F G+I C L+ +R G+GF+ + EDA
Sbjct: 71 NPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDA 130
Query: 387 EKARAAFNGLLMQGKTLKVSXAL 455
AR + G ++V +L
Sbjct: 131 TAARDKLCNTDLDGHKIRVDFSL 153
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +3
Query: 240 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARA 401
TK+ V +P + ++ F G IE +I +R GYGFV + AE+A
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Query: 402 AFNGLLMQGKTLKVSXALLNPENKVS 479
N ++ G+ V+ A L + + +
Sbjct: 95 DPNPII-DGRKANVNLAYLGAKPRTN 119
>Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical
protein F28B1.2 protein.
Length = 973
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 28 ELVNPATPSFSYDNNF----CVCSLFFFYNLNEVNNVQCCEFYYYFVFCSVVTIKEQC 189
+L+NPA Y C C++ F N NNV FYY V+ +V + C
Sbjct: 295 QLINPAGACVKYSEPVEMQKCKCNVKLFNKKNVQNNVGGNYFYYNTVWQPIVKTNDDC 352
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 30.7 bits (66), Expect = 0.94
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA- 401
K+ + + T + M F GK+E L+ +RG+GFV ++ E A+K
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 402 ---AFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTL 539
NG +++ K + +L P + NLY +PP+ L
Sbjct: 195 HFHEINGKMVECKKAQPKEVML-PVQLNKSRAAAARNLY--GMPPETLL 240
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +3
Query: 300 FSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
F A GKI+ ++ + RGY F+EY + A +G+ + GK L V
Sbjct: 124 FEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVV 176
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 30.7 bits (66), Expect = 0.94
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNL 521
+RG+ FVE+ E + A AA + +GK+++V A + ENK +++ L
Sbjct: 69 SRGFAFVEFTTGEGCKLALAAREQTI-KGKSVEVKPAK-SRENK---------KVFVGGL 117
Query: 522 PPDMTLERLNTLFSPFGNI 578
P D + + L + F FG +
Sbjct: 118 PSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 30.7 bits (66), Expect = 0.94
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +3
Query: 342 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNL 521
+RG+ FVE+ E + A AA + +GK+++V A + ENK +++ L
Sbjct: 69 SRGFAFVEFTTGEGCKLALAAREQTI-KGKSVEVKPAK-SRENK---------KVFVGGL 117
Query: 522 PPDMTLERLNTLFSPFGNI 578
P D + + L + F FG +
Sbjct: 118 PSDYSEQDLRSHFEQFGKV 136
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 30.7 bits (66), Expect = 0.94
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +3
Query: 243 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA- 401
K+ + + T + M F GK+E L+ +RG+GFV ++ E A+K
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 402 ---AFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYISNLPPDMTL 539
NG +++ K + +L P + NLY +PP+ L
Sbjct: 195 HFHEINGKMVECKKAQPKEVML-PVQLNKSRAAAARNLY--GMPPETLL 240
>Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical
protein ZK822.5b protein.
Length = 431
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -2
Query: 565 GLKRVLSLS----RVMSGGKLLMYRLDSVSGLWLTLFSG 461
GL+RVLS++ R+ G++ +R+D + LW+ LFSG
Sbjct: 73 GLERVLSIAWDSGRISELGRM-DWRIDQYNSLWINLFSG 110
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -2
Query: 565 GLKRVLSLS----RVMSGGKLLMYRLDSVSGLWLTLFSG 461
GL+RVLS++ R+ G++ +R+D + LW+ LFSG
Sbjct: 219 GLERVLSIAWDSGRISELGRM-DWRIDQYNSLWINLFSG 256
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
S L++ NLP ++ +L +F PF +T + + Y
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNY 38
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXY 605
S L++ NLP ++ +L +F PF +T + + Y
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNY 38
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 465 ENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+N+ +K + NL SNL D +E+LN L N+R+ + R
Sbjct: 202 KNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIMEVQR 249
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 465 ENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQXYR 608
+N+ +K + NL SNL D +E+LN L N+R+ + R
Sbjct: 202 KNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIMEVQR 249
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 489 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
D LY+ NL +T + + TLF+ G++T ++V
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKV 77
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 312 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 312 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 312 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 443
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 300 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
F G+I ++ G+GFVE++ DAE A NG + G+
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGE 64
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 300 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
F G+I ++ G+GFVE++ DAE A NG + G+
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGE 64
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 300 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
F G+I ++ G+GFVE++ DAE A NG + G+
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGE 64
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 121 CSLHLNCKKRTKNKHKSYCRTKTTALPGS 35
C LH +C+K +++K++ CR T G+
Sbjct: 386 CGLHESCQKNSESKYECICREGFTIFEGT 414
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 121 CSLHLNCKKRTKNKHKSYCRTKTTALPGS 35
C LH +C+K +++K++ CR T G+
Sbjct: 386 CGLHESCQKNSESKYECICREGFTIFEGT 414
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 498 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 593
+NL+I +LP D L F+PFG I +++V
Sbjct: 76 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 107
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 183 TMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-RGYGF 359
T + E G N+ L + IPE + + +FS + + + N + + F
Sbjct: 128 TQKEPQETDGPGLPNNI----LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAF 183
Query: 360 VEYEKHEDAEKARAAFN 410
+EYE + +E AR A +
Sbjct: 184 IEYESEDLSEPARQALD 200
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical protein
C56E6.6 protein.
Length = 1102
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 429 KTLKVSXALLNPENKVSHKPDTESNL-YISNLP--PDMTLERLNTLFSPFGNITNSRVSQ 599
K ++S L P KV + +NL IS++ P + L++LN +P ++TN + Q
Sbjct: 807 KIYELSEKDLAPLTKVVALDISHNNLKQISSMAFEPLIHLKQLNVSANPITHLTNEHIQQ 866
Query: 600 XYRLCLLRDPA 632
Y+L + D A
Sbjct: 867 LYKLYNIPDMA 877
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 504 LYISNLPPDM-TLERLNTLFSPFGNITNSRV 593
L ++ +PP+M T+ +LN F+ FG + N +V
Sbjct: 368 LQVAKIPPEMNTIAKLNEHFATFGTVDNIQV 398
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 121 CSLHLNCKKRTKNKHKSYCRTKTTALPGS 35
C LH +C+K +++K++ CR T G+
Sbjct: 386 CGLHESCQKNSESKYECICREGFTIFEGT 414
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 279 RDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGK 431
RD+ + F GK+ +I G+GFV+++ DA+ A NG + G+
Sbjct: 16 RDVEH-FFRGYGKLSD--VIMKNGFGFVDFQDQRDADDAVHDLNGKELCGE 63
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Frame = +3
Query: 183 TMQNDMENGGGDANTNVSPTKLMVNYI----PELMTRDMMYALFSAMGKIESCK-----L 335
T+ NDME+ T+ PT+ N + E T + ++ +G +ES K
Sbjct: 237 TIVNDMEDDSSYTKTSTMPTEETTNSLESTSSESFTAESTSSISPILGTLESIKQEDFTT 296
Query: 336 IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPENKVSHKPDTESNLYIS 515
+ + E + E ++ + NG Q L++ + +PE S + + + ++
Sbjct: 297 LLDDLITSAERDPTETVQRT-SEINGAFTQNSILELDH-VTSPETSTSESGNDDLDAIVN 354
Query: 516 NLPPD 530
NL D
Sbjct: 355 NLDED 359
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 398
P ++ V P T + F ++ K++ + +GYGF+ +E + AE+ R
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIR 123
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 237 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 398
P ++ V P T + F ++ K++ + +GYGF+ +E + AE+ R
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIR 124
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 344 IRYQLAALYFTHGREERVHHVA 279
IR + LYF HG EE VH+++
Sbjct: 173 IRLKKKGLYFKHGTEEDVHYLS 194
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 344 IRYQLAALYFTHGREERVHHVA 279
IR + LYF HG EE VH+++
Sbjct: 173 IRLKKKGLYFKHGTEEDVHYLS 194
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
L++ NLP ++ L LFSP G+I +S
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS 148
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
L++ NLP ++ L LFSP G+I +S
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS 148
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 504 LYISNLPPDMTLERLNTLFSPFGNITNSRVS 596
L++ NLP ++ L LFSP G+I +S
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS 148
>U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical
protein C30G12.4 protein.
Length = 258
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 40 PATPSFSYDNN-FCVCSLFFFYNLNEVNNVQCCEFYYYFVFCSVVTIKEQC 189
PA P S +++ F CSL F Y+ V+ C YY F S+++I C
Sbjct: 86 PACPPSSLNSHSFECCSLTFSYSYMMVS---CKLLLYYGTFSSIISIVLSC 133
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/60 (21%), Positives = 25/60 (41%)
Frame = +3
Query: 291 YALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSXALLNPEN 470
Y F + + ++GYGFV + ED +A +G + + +K+ + N
Sbjct: 226 YPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKLRKSAWKERN 285
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 37 NPATPSFSYDNNFCVCSLFFFYNLNEV-NNV 126
N ATP + FC+ L FYN+ V NNV
Sbjct: 323 NNATPILTLSGEFCIPGLQAFYNIFHVMNNV 353
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 37 NPATPSFSYDNNFCVCSLFFFYNLNEV-NNV 126
N ATP + FC+ L FYN+ V NNV
Sbjct: 357 NNATPILTLSGEFCIPGLQAFYNIFHVMNNV 387
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 454 SSTLRTKSATSPTPNPTCTSAIYHQT*PSKDSTL 555
S++++TK+ TSPT +PT T+ T S S++
Sbjct: 662 STSVQTKTTTSPTKSPTSTTITTSGTTTSATSSV 695
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLI--ANRG---YGFVEYEKHEDAEKARAAFN-- 410
+ IP+ ++ +F GK+ C+++ +N G GFV DA++ R N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 411 GLLMQGKTLKVS 446
L+ + TLKV+
Sbjct: 77 NLIGENFTLKVT 88
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 222 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKL 335
+T+ K++V+ I +T+ + + FS GKI SC L
Sbjct: 106 HTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCIL 143
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +3
Query: 252 VNYIPELMTRDMMYALFSAMGKIESCKLI--ANRG---YGFVEYEKHEDAEKARAAFN-- 410
+ IP+ ++ +F GK+ C+++ +N G GFV DA++ R N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 411 GLLMQGKTLKVS 446
L+ + TLKV+
Sbjct: 77 NLIGENFTLKVT 88
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 231 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA---NRGYGFVEYEKHEDAEKARA 401
++P +L +N +P + +F + I+ ++ F+ + EDA+ A A
Sbjct: 635 INPLQLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPNSKKRAFITFGTVEDAQAAFA 694
Query: 402 AFNGLLMQGKTLKVSXALLNPENKVSHKP 488
NGL + + V A + E KV KP
Sbjct: 695 KSNGLKVNNHLVDVFYA-RHQETKVDVKP 722
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +3
Query: 474 VSHKP--DTES-NLYISNLPPDMTLERLNTLFSPFGNITNSRVSQ 599
V ++P D E+ +Y+ NLP + E+L L S +G + R+S+
Sbjct: 808 VKYRPIYDREAATVYVDNLPEGCSEEKLLRLCSCYGTVVEVRISK 852
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,444,887
Number of Sequences: 27780
Number of extensions: 302319
Number of successful extensions: 1293
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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