Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_N08
(430 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 92 3e-19
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 92 3e-19
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 92 3e-19
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 92 3e-19
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 90 1e-18
D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain pro... 29 2.0
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 6.1
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 6.1
X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein ... 27 8.1
AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p pro... 27 8.1
AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-P... 27 8.1
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/71 (57%), Positives = 44/71 (61%)
Frame = +1
Query: 46 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 225
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 226 KNKNFCPVFEL 258
+ F P L
Sbjct: 66 RQHKFRPEINL 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 251 LNLDKLWTLVSEQTRLKYASAPXGXVPVINIVKAXXXXXXXXXXXPKQPVIVKAKFXSK 427
+NLDKLW+LV + + PVI++VK P +PVIVKAK+ SK
Sbjct: 74 INLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSK 132
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/71 (57%), Positives = 44/71 (61%)
Frame = +1
Query: 46 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 225
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 226 KNKNFCPVFEL 258
+ F P L
Sbjct: 66 RQHKFRPEINL 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 251 LNLDKLWTLVSEQTRLKYASAPXGXVPVINIVKAXXXXXXXXXXXPKQPVIVKAKFXSK 427
+NLDKLW+LV + + PVI++VK P +PVIVKAK+ SK
Sbjct: 74 INLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSK 132
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/71 (57%), Positives = 44/71 (61%)
Frame = +1
Query: 46 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 225
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 226 KNKNFCPVFEL 258
+ F P L
Sbjct: 66 RQHKFRPEINL 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 251 LNLDKLWTLVSEQTRLKYASAPXGXVPVINIVKAXXXXXXXXXXXPKQPVIVKAKFXSK 427
+NLDKLW+LV + + PVI++VK P +PVIVKAK+ SK
Sbjct: 74 INLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSK 132
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 91.9 bits (218), Expect = 3e-19
Identities = 41/71 (57%), Positives = 44/71 (61%)
Frame = +1
Query: 46 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 225
+KKTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 226 KNKNFCPVFEL 258
+ F P L
Sbjct: 66 RQHKFRPEINL 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 251 LNLDKLWTLVSEQTRLKYASAPXGXVPVINIVKAXXXXXXXXXXXPKQPVIVKAKFXSK 427
+NLDKLW+LV + + PVI++VK P +PVIVKAK+ SK
Sbjct: 74 INLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSK 132
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 89.8 bits (213), Expect = 1e-18
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = +1
Query: 46 KKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 225
+KKTRKLRGHVS N GG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 226 KNKNFCPVFEL 258
+ F P L
Sbjct: 66 RQHKFRPEINL 76
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 251 LNLDKLWTLVSEQTRLKYASAPXGXVPVINIVKAXXXXXXXXXXXPKQPVIVKAKFXSK 427
+NLDKLW+LV + + PVI++VK P +PVIVKAK+ SK
Sbjct: 74 INLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSK 132
>D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain
protein protein.
Length = 761
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 319 WQXP--RHQYCQSWILQVARQRQTPQTTCHSKSKVLLK 426
W P RH C+ + +A R+TP TC S+ + +L+
Sbjct: 704 WIRPVNRHSQCRWKAIAMAASRRTPSDTCSSRRRSVLR 741
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 139 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 237
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 139 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 237
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein
protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 149 CSPPALPRPPGCLRCFPIRPCP 84
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
>AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p
protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 149 CSPPALPRPPGCLRCFPIRPCP 84
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
>AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-PA
protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 149 CSPPALPRPPGCLRCFPIRPCP 84
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,212,391
Number of Sequences: 53049
Number of extensions: 360780
Number of successful extensions: 1301
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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