Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_N01
         (327 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    27   4.2  
AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p pro...    26   9.7  
AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1 ...    26   9.7  
AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA...    26   9.7  

>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
           protein.
          Length = 1667

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +1

Query: 100 IKPVARPSIHYHKGYCPFACREFTMDGNRVSRSISP 207
           I P A      H GYCP   R    + N+V+   SP
Sbjct: 761 IGPEASTFALLHPGYCPIDVRRINKECNKVAADHSP 796


>AY118400-1|AAM48429.1|  608|Drosophila melanogaster RE60058p
           protein.
          Length = 608

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 55  NLMSNIEQGSNGGANIKPVARPSIHYHKGYCPFAC 159
           +L S    GS+G +++ P    + H H G CP  C
Sbjct: 269 SLASPTPSGSSG-SSLSPRENGTSHSHHGGCPIGC 302


>AL031863-1|CAA21315.1|  526|Drosophila melanogaster EG:EG0003.1
           protein.
          Length = 526

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 55  NLMSNIEQGSNGGANIKPVARPSIHYHKGYCPFAC 159
           +L S    GS+G +++ P    + H H G CP  C
Sbjct: 187 SLASPTPSGSSG-SSLSPRENGTSHSHHGGCPIGC 220


>AE013599-2369|AAF57936.2|  608|Drosophila melanogaster CG8910-PA
           protein.
          Length = 608

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 55  NLMSNIEQGSNGGANIKPVARPSIHYHKGYCPFAC 159
           +L S    GS+G +++ P    + H H G CP  C
Sbjct: 269 SLASPTPSGSSG-SSLSPRENGTSHSHHGGCPIGC 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,131,312
Number of Sequences: 53049
Number of extensions: 236838
Number of successful extensions: 535
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)