Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M24
         (370 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.       24   2.1  
AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.       22   6.4  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    22   6.4  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    22   8.4  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    22   8.4  

>AY331407-1|AAQ97588.1|  101|Anopheles gambiae agCP14332 protein.
          Length = 101

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 184 CPRRAHDRPARIGSYV*GDDWRLGKR 261
           C RR    PAR    +  D WR+G R
Sbjct: 11  CTRRNRTAPARNYDTIPIDRWRVGNR 36


>AY331403-1|AAQ97584.1|  103|Anopheles gambiae agCP14332 protein.
          Length = 103

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 151 ISSVQSQSSE*CPRRAHDRPARIGSYV*GDDWRLGKR 261
           + S+ + ++  C RR    PAR    +  D WR+  R
Sbjct: 1   MKSLHTTTTMTCTRRNRTAPARNYDTIPIDRWRVSNR 37


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 254 GNAKSVIRKNRTKPDKVXI 310
           G+  +V+RKNR KP +  I
Sbjct: 213 GSWSTVVRKNRRKPKESVI 231


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 268 ALSVSPASNHHLIHRIR 218
           +L +SP +NHHL H+ R
Sbjct: 46  SLGMSPYTNHHL-HQTR 61


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 268 ALSVSPASNHHLIHRIR 218
           +L +SP +NHHL H+ R
Sbjct: 46  SLGMSPYTNHHL-HQTR 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,895
Number of Sequences: 2352
Number of extensions: 4385
Number of successful extensions: 63
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)