Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M24
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr...    28   1.8  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    27   3.2  
AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical ...    27   4.2  

>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical protein
            C18H2.5 protein.
          Length = 1139

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 97   DVATDDNLQYQFFPXFKWISSVQSQSS 177
            D +TDD L  QF   FK I+S + QSS
Sbjct: 921  DKSTDDKLTNQFMEVFKSIASNEPQSS 947


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 218 SDPMYEVMIGGWGNAKSVIRKNRTK 292
           S+P YEV++GG   A  V+ +N+ K
Sbjct: 334 SNPHYEVVLGGKKTANFVVEENKIK 358


>AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical
           protein C17B7.5 protein.
          Length = 820

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 15/65 (23%), Positives = 32/65 (49%)
 Frame = +1

Query: 88  NVMDVATDDNLQYQFFPXFKWISSVQSQSSE*CPRRAHDRPARIGSYV*GDDWRLGKR*E 267
           N MD+ T+ +LQ++  P  K+   ++  ++         +   +GS+     WRL +R E
Sbjct: 388 NCMDIPTNGSLQFEKPPFDKFFIGIKMLNNMTTNHTNLPKIDNVGSFNVNGHWRLIRRRE 447

Query: 268 RHQEK 282
           + + +
Sbjct: 448 KFERQ 452


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,823,109
Number of Sequences: 27780
Number of extensions: 106767
Number of successful extensions: 237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)