Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M20
         (378 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                            135   9e-33
10_07_0174 + 13815478-13815903                                        132   7e-32
03_02_0943 + 12598616-12598789,12599790-12601250                       30   0.53 
06_01_0889 - 6807449-6809257                                           29   1.6  
05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464...    27   4.9  

>03_01_0066 - 537729-538163
          Length = 144

 Score =  135 bits (327), Expect = 9e-33
 Identities = 65/105 (61%), Positives = 81/105 (77%)
 Frame = +1

Query: 58  RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
           RTKTV        EKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++  
Sbjct: 5   RTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRG 64

Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKML 372
            VRGIS+KLQEEERERR ++VP  SALE D I VD +T DML  L
Sbjct: 65  PVRGISLKLQEEERERRMDFVPDRSALEVDDIRVDKETLDMLTSL 109


>10_07_0174 + 13815478-13815903
          Length = 141

 Score =  132 bits (320), Expect = 7e-32
 Identities = 63/105 (60%), Positives = 80/105 (76%)
 Frame = +1

Query: 58  RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
           RTKTV        EKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++  
Sbjct: 5   RTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRG 64

Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKML 372
            VRGIS+KLQEEERERR ++VP  SALE + I VD +T +ML  L
Sbjct: 65  PVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAAL 109


>03_02_0943 + 12598616-12598789,12599790-12601250
          Length = 544

 Score = 30.3 bits (65), Expect = 0.53
 Identities = 19/60 (31%), Positives = 34/60 (56%)
 Frame = +1

Query: 196 AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
           A +++HL+RR+        + K Q EE ++  +     + LEHD+I  + +T D+LK L+
Sbjct: 41  AAWSSHLIRRMFAPP----NPKEQSEESKQPVDIKEQAAQLEHDLIIKEKETLDVLKELE 96


>06_01_0889 - 6807449-6809257
          Length = 602

 Score = 28.7 bits (61), Expect = 1.6
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 226 LRHSQVRGI-SIKLQEEERERRDNYVPXVSALEHDIIEVDPD 348
           LRH Q R I ++ +    R R + YVP      HD+ E D +
Sbjct: 487 LRHPQAREIYAMAVDMVSRIRAEGYVPDTGEALHDVAEEDKE 528


>05_01_0006 -
           44159-44206,44805-44850,45730-45818,46377-46394,
           46490-46609,46702-46772,47038-47086,47567-47658,
           47769-47811,47928-48049,48143-48426,48961-49148,
           49220-49336,49516-49557,49991-50101,50530-50688,
           50710-50769,50850-50927,51010-51103,51182-51483,
           51659-51721,51808-51936
          Length = 774

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 250 ISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKML 372
           ++I++Q  +  +R   +  V A E   I  DP+TK+++K +
Sbjct: 615 LAIEVQPLDDRKRKGEIVKVYANEQKKITCDPETKELIKKI 655


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,859,417
Number of Sequences: 37544
Number of extensions: 146177
Number of successful extensions: 366
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)