Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_M20
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 165 6e-41
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 165 6e-41
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 165 6e-41
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 165 6e-41
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 165 6e-41
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 165 6e-41
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 165 6e-41
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 165 6e-41
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 165 6e-41
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 165 6e-41
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 143 1e-34
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 29 5.0
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 29 5.0
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 29 5.0
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 29 5.0
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 29 5.0
M81886-1|AAA58395.1| 906|Homo sapiens glutamate receptor type 1... 29 6.6
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 165 bits (400), Expect = 6e-41
Identities = 78/106 (73%), Positives = 88/106 (83%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 237
RTKTV EKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRG 64
Query: 238 QVRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEEERERRDNYVP VSAL+ +IIEVDPDTK+MLK+LD
Sbjct: 65 PVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLD 110
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 143 bits (347), Expect = 1e-34
Identities = 67/105 (63%), Positives = 81/105 (77%)
Frame = +1
Query: 61 TKTVXXXXXXXXEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQ 240
TKT+ EKYY L DF TNK +C+EIAIIP+K L NK AG+ THLM++++
Sbjct: 6 TKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGP 65
Query: 241 VRGISIKLQEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
VRGISIKLQEE RERRDNYVP +SAL+ +IIEVDPDTK+MLK+LD
Sbjct: 66 VRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLKLLD 110
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 265 QEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 265 QEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 265 QEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 265 QEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 265 QEEERERRDNYVPXVSALEHDIIEVDPDTKDMLKMLD 375
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>M81886-1|AAA58395.1| 906|Homo sapiens glutamate receptor type 1
protein.
Length = 906
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 199 GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPXVSALEHDII 333
G + R L+ + G++ +Q E+ RR NY V ++HD I
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDSI 376
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,183,524
Number of Sequences: 237096
Number of extensions: 787078
Number of successful extensions: 1933
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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