Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M19
         (410 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...   130   3e-31
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419          125   2e-29
04_04_0446 - 25288154-25288863,25288949-25289135,25289331-25291061     31   0.47 
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    29   1.9  
03_06_0610 + 35052455-35053429,35054936-35055511                       28   2.5  
05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975...    27   4.4  
06_02_0103 - 11829343-11829699,11831560-11831826,11832239-118325...    27   7.7  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score =  130 bits (315), Expect = 3e-31
 Identities = 61/84 (72%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
 Frame = +1

Query: 160 EIKLFGRWSCYDVQVSDMSLQDYISVKE-KYAKYXPHSAGRYAHKRXRKAQCPIXERLTN 336
           E+KLF RWS  DVQV+D+SL DY++V   K+A Y PH+AGRY+ KR RKAQCPI ERLTN
Sbjct: 10  EVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFRKAQCPIVERLTN 69

Query: 337 SLMMHGXNNGKKLMAVRIVKHAFE 408
           SLMMHG NNGKK+MAVRIVKHA E
Sbjct: 70  SLMMHGRNNGKKIMAVRIVKHAME 93


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score =  125 bits (301), Expect = 2e-29
 Identities = 58/83 (69%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
 Frame = +1

Query: 163 IKLFGRWSCYDVQVSDMSLQDYISVKE-KYAKYXPHSAGRYAHKRXRKAQCPIXERLTNS 339
           +KLF  WS  DVQV+D+SL DY++V   K+A Y PH+AGRY+ KR RKAQCP+ ERLTNS
Sbjct: 12  VKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLTNS 71

Query: 340 LMMHGXNNGKKLMAVRIVKHAFE 408
           LMMHG NNGKK+MAVRIVKHA E
Sbjct: 72  LMMHGRNNGKKIMAVRIVKHAME 94


>04_04_0446 - 25288154-25288863,25288949-25289135,25289331-25291061
          Length = 875

 Score = 30.7 bits (66), Expect = 0.47
 Identities = 23/92 (25%), Positives = 38/92 (41%)
 Frame = +1

Query: 103 EAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYXPHSAGRY 282
           +AGS+ V   S   + D+ E+K  G       + S  S+ D  +V E      P S+ R 
Sbjct: 578 DAGSIEVPVSSDCVSGDVDEVKSNGDLKSIHDETSPTSILD--TVFEDSNSNEPESSRRT 635

Query: 283 AHKRXRKAQCPIXERLTNSLMMHGXNNGKKLM 378
           +       +CP  + +  S      N+G  L+
Sbjct: 636 SCTERVALRCPAIDSVARSFSWEDTNSGSPLL 667


>07_01_0077 +
           566895-567127,567207-567331,571204-571340,571437-571542,
           571635-571885,572018-572128,572209-572320,572626-572716,
           573168-573507,573678-573900,573946-574204,574274-574481,
           574572-574622,574712-574870,574956-575120,575322-575399,
           575732-576031,576107-576259,576871-576918,577019-577188,
           577738-577852,578462-578623,578789-578893,578969-579199,
           579277-579410,579484-579738,579822-580110,580214-580306,
           580395-580520,580646-580897
          Length = 1693

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 95  T*PRQAAWLWKPCLYHKPPTF 157
           T P Q +WLW+  L H P  F
Sbjct: 88  TDPSQCSWLWREVLKHNPDAF 108


>03_06_0610 + 35052455-35053429,35054936-35055511
          Length = 516

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = -3

Query: 213 HIRDLHIVATPSAEKLDFR---NVGGLW*RHGFHN-HAACLGYVVIPVLLGHDWY 61
           ++   ++V TP A  L F      GGLW  +G  +  AAC+  V++ V+   DW+
Sbjct: 418 NLLSFYLVGTPVAVTLAFGARVGFGGLW--YGLLSAQAACVALVLLAVVWRTDWH 470


>05_05_0116 -
           22496535-22496576,22496974-22497058,22497468-22497545,
           22497656-22497803,22498612-22498771,22499056-22499058
          Length = 171

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -3

Query: 249 VLLFNGNVVLQRHIRDLHIVATPSAEK 169
           +++F+G++V+ + I+DLH   T   E+
Sbjct: 57  IVMFDGHIVVYKFIQDLHFFVTGGEEE 83


>06_02_0103 -
           11829343-11829699,11831560-11831826,11832239-11832559,
           11833783-11833844,11835413-11835446,11835539-11835619
          Length = 373

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +1

Query: 94  DVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYXP 264
           ++   G +VV    L + +D P+ +L   W+     +SDM+L+  IS ++  + Y P
Sbjct: 215 EIVPGGRMVVSL--LVKRSDKPDTELIQPWTPAVTALSDMALRGVISKEKLDSFYIP 269


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,145,480
Number of Sequences: 37544
Number of extensions: 183348
Number of successful extensions: 436
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)