Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_M19
(410 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 157 1e-38
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 157 1e-38
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 157 1e-38
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 157 1e-38
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 153 2e-37
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 70 3e-12
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 32 0.85
AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens ... 30 2.6
AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens ... 30 2.6
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 29 7.9
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 29 7.9
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 29 7.9
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 157 bits (382), Expect = 1e-38
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYXPHSAGRYAHKRXRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKY PHSAGRYA KR RKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 XERLTNSLMMHGXNNGKKLMAVRIVKHAFE 408
ERLTNS+MMHG NNGKKLM VRIVKHAFE
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFE 98
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 157 bits (382), Expect = 1e-38
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYXPHSAGRYAHKRXRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKY PHSAGRYA KR RKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 XERLTNSLMMHGXNNGKKLMAVRIVKHAFE 408
ERLTNS+MMHG NNGKKLM VRIVKHAFE
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFE 98
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 157 bits (382), Expect = 1e-38
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYXPHSAGRYAHKRXRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKY PHSAGRYA KR RKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 XERLTNSLMMHGXNNGKKLMAVRIVKHAFE 408
ERLTNS+MMHG NNGKKLM VRIVKHAFE
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFE 98
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 157 bits (382), Expect = 1e-38
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYXPHSAGRYAHKRXRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKY PHSAGRYA KR RKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 319 XERLTNSLMMHGXNNGKKLMAVRIVKHAFE 408
ERLTNS+MMHG NNGKKLM VRIVKHAFE
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFE 98
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 153 bits (371), Expect = 2e-37
Identities = 69/90 (76%), Positives = 77/90 (85%)
Frame = +1
Query: 139 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYXPHSAGRYAHKRXRKAQCPI 318
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKY PHSAGRYA RKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 319 XERLTNSLMMHGXNNGKKLMAVRIVKHAFE 408
ERLTNS+MMHG NNGKKLM VRIVKHAFE
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFE 98
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 70.1 bits (164), Expect = 3e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 304 AQCPIXERLTNSLMMHGXNNGKKLMAVRIVKHAFE 408
AQCPI ERLTNS+MMHG NNGKKLM VRIVKHAFE
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFE 35
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 31.9 bits (69), Expect = 0.85
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 367 CHCSDRASLESX*GAPXLGTGLYGXACVHTC 275
C C + ++ E G G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
>AK126695-1|BAC86646.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ44741 fis, clone BRACE3027931. ).
Length = 398
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 MCKSLICLCRTTFPLKRSTQNXYLIQLA 277
+CKS C+C +T + ST+ Y QLA
Sbjct: 259 VCKSTYCICNSTHCVCNSTRTAYATQLA 286
>AK023048-1|BAB14374.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ12986 fis, clone NT2RP3000055. ).
Length = 171
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 MCKSLICLCRTTFPLKRSTQNXYLIQLA 277
+CKS C+C +T + ST+ Y QLA
Sbjct: 32 VCKSTYCICNSTHCVCNSTRTAYATQLA 59
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 367 CHCSDRASLESX*GAPXLGTGLYGXACVH 281
C C + ++ E G G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 367 CHCSDRASLESX*GAPXLGTGLYGXACVH 281
C C + ++ E G G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 367 CHCSDRASLESX*GAPXLGTGLYGXACVH 281
C C + ++ E G G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,801,265
Number of Sequences: 237096
Number of extensions: 979594
Number of successful extensions: 1756
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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