Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M17
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.4  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   8.4  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 162 ITVGRDSINLNGIEGCQYFSTFKMISKSNKKAREYTVELTDEVVNLKD-EIEIKLSGSDN 338
           +T+  D ++  G     YF+T +   +  KK  EY+  + +    L D   E+K + ++ 
Sbjct: 652 VTLEGDQVSSKGSLTGGYFNTSRSRLEMQKKRSEYSQLIQEHEKELADFRAELKQTEANI 711

Query: 339 RNIVDD 356
            +IV +
Sbjct: 712 NSIVSE 717


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 390 RFLQLSVSVRVHHQRCFYYHYQI 322
           R L+L+++ R HH R   +H+ +
Sbjct: 482 RMLRLAMASRHHHHRAGLHHHDL 504


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +3

Query: 171 GRDSINLNGIEGCQYFSTFKMISK 242
           GRDS+  +G  GC ++   +++++
Sbjct: 151 GRDSVETHGRVGCPHYMAPEVVAR 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,804
Number of Sequences: 2352
Number of extensions: 9150
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)