Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M12
         (578 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U82010-1|AAC51330.1|  443|Homo sapiens heme A: farnesyltransfera...    85   1e-16
U09466-1|AAA21148.1|  443|Homo sapiens heme A:farnesyltransferas...    85   1e-16
BT006985-1|AAP35631.1|  443|Homo sapiens COX10 homolog, cytochro...    85   1e-16
BC006394-1|AAH06394.1|  443|Homo sapiens COX10 homolog, cytochro...    85   1e-16
BC000060-1|AAH00060.1|  443|Homo sapiens COX10 homolog, cytochro...    85   1e-16
AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.     29   9.0  

>U82010-1|AAC51330.1|  443|Homo sapiens heme A: farnesyltransferase
           protein.
          Length = 443

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 45/90 (50%), Positives = 58/90 (64%)
 Frame = +2

Query: 308 KVTQDTRVWKETPSYDRKSNTGXYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFC 487
           K T++ + WKE     +  +       LSK +LT+LVV T+ AG+ALAP PF    F   
Sbjct: 135 KETKEEKRWKEMKL--QVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLT 192

Query: 488 AVGTGLVSAAANSINQYHEVPFDAQMSRTK 577
           +VGTGL S AANSINQ+ EVPFD+ M+RTK
Sbjct: 193 SVGTGLASCAANSINQFFEVPFDSNMNRTK 222


>U09466-1|AAA21148.1|  443|Homo sapiens heme A:farnesyltransferase
           protein.
          Length = 443

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 45/90 (50%), Positives = 58/90 (64%)
 Frame = +2

Query: 308 KVTQDTRVWKETPSYDRKSNTGXYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFC 487
           K T++ + WKE     +  +       LSK +LT+LVV T+ AG+ALAP PF    F   
Sbjct: 135 KETKEEKRWKEMKL--QVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLT 192

Query: 488 AVGTGLVSAAANSINQYHEVPFDAQMSRTK 577
           +VGTGL S AANSINQ+ EVPFD+ M+RTK
Sbjct: 193 SVGTGLASCAANSINQFFEVPFDSNMNRTK 222


>BT006985-1|AAP35631.1|  443|Homo sapiens COX10 homolog, cytochrome
           c oxidase assembly protein, heme A: farnesyltransfera
           protein.
          Length = 443

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 45/90 (50%), Positives = 58/90 (64%)
 Frame = +2

Query: 308 KVTQDTRVWKETPSYDRKSNTGXYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFC 487
           K T++ + WKE     +  +       LSK +LT+LVV T+ AG+ALAP PF    F   
Sbjct: 135 KETKEEKRWKEMKL--QVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLT 192

Query: 488 AVGTGLVSAAANSINQYHEVPFDAQMSRTK 577
           +VGTGL S AANSINQ+ EVPFD+ M+RTK
Sbjct: 193 SVGTGLASCAANSINQFFEVPFDSNMNRTK 222


>BC006394-1|AAH06394.1|  443|Homo sapiens COX10 homolog, cytochrome
           c oxidase assembly protein, heme A: farnesyltransfera
           protein.
          Length = 443

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 45/90 (50%), Positives = 58/90 (64%)
 Frame = +2

Query: 308 KVTQDTRVWKETPSYDRKSNTGXYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFC 487
           K T++ + WKE     +  +       LSK +LT+LVV T+ AG+ALAP PF    F   
Sbjct: 135 KETKEEKRWKEMKL--QVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLT 192

Query: 488 AVGTGLVSAAANSINQYHEVPFDAQMSRTK 577
           +VGTGL S AANSINQ+ EVPFD+ M+RTK
Sbjct: 193 SVGTGLASCAANSINQFFEVPFDSNMNRTK 222


>BC000060-1|AAH00060.1|  443|Homo sapiens COX10 homolog, cytochrome
           c oxidase assembly protein, heme A: farnesyltransfera
           protein.
          Length = 443

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 45/90 (50%), Positives = 58/90 (64%)
 Frame = +2

Query: 308 KVTQDTRVWKETPSYDRKSNTGXYCLMLSKSRLTSLVVLTSMAGYALAPAPFQLTTFAFC 487
           K T++ + WKE     +  +       LSK +LT+LVV T+ AG+ALAP PF    F   
Sbjct: 135 KETKEEKRWKEMKL--QVYDLPGILAQLSKIKLTALVVSTTAAGFALAPGPFDWPCFLLT 192

Query: 488 AVGTGLVSAAANSINQYHEVPFDAQMSRTK 577
           +VGTGL S AANSINQ+ EVPFD+ M+RTK
Sbjct: 193 SVGTGLASCAANSINQFFEVPFDSNMNRTK 222


>AF007191-1|AAC02269.1|  589|Homo sapiens intestinal mucin protein.
          Length = 589

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
 Frame = +2

Query: 272 PLKT--QTTATVKNKVTQDTRVWKETPSYDRKSNTGXYCL---MLSKSRLTSLV----VL 424
           PL T   TT TVK  VT  T  ++ET +    ++     L   M S +RLTS +     L
Sbjct: 331 PLSTIVATTGTVKTTVTSSTATFRETTTLTSTTDISTESLMTAMTSTTRLTSAITSKTTL 390

Query: 425 TSMAGYALAP 454
           TS+   A  P
Sbjct: 391 TSLKTTASRP 400


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,328,697
Number of Sequences: 237096
Number of extensions: 1628949
Number of successful extensions: 2895
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2895
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)