Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M12
         (578 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058639-1|AAL13868.1|  391|Drosophila melanogaster LD33876p pro...   109   3e-24
AE014134-1840|AAF52915.1|  391|Drosophila melanogaster CG5037-PA...   109   3e-24
BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p pro...    31   1.5  
AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p pro...    31   1.5  
AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB...    31   1.5  
AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA...    31   1.5  

>AY058639-1|AAL13868.1|  391|Drosophila melanogaster LD33876p
           protein.
          Length = 391

 Score =  109 bits (262), Expect = 3e-24
 Identities = 65/121 (53%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
 Frame = +2

Query: 230 LARISTAQNWRSKVPLKTQTTATVKN--KVTQ--DTRV-WKETPSYDRKSNTGXYCLMLS 394
           L R STA    S+      T + V    KV    D+++ W  +P Y     T      LS
Sbjct: 22  LIRYSTAATIASQDDKGVTTASPVSQAGKVQHLPDSQITWMPSP-YTMPGKTLSQYKKLS 80

Query: 395 KSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAVGTGLVSAAANSINQYHEVPFDAQMSRT 574
           K RLTSLVV+T+M GYA+APA F  TTFA C +GTGLVSAAAN+INQYHEVPFD+QMSRT
Sbjct: 81  KFRLTSLVVITTMGGYAMAPAAFDPTTFAMCTLGTGLVSAAANAINQYHEVPFDSQMSRT 140

Query: 575 K 577
           K
Sbjct: 141 K 141


>AE014134-1840|AAF52915.1|  391|Drosophila melanogaster CG5037-PA
           protein.
          Length = 391

 Score =  109 bits (262), Expect = 3e-24
 Identities = 65/121 (53%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
 Frame = +2

Query: 230 LARISTAQNWRSKVPLKTQTTATVKN--KVTQ--DTRV-WKETPSYDRKSNTGXYCLMLS 394
           L R STA    S+      T + V    KV    D+++ W  +P Y     T      LS
Sbjct: 22  LIRYSTAATIASQDDKGVTTASPVSQAGKVQHLPDSQITWMPSP-YTMPGKTLSQYKKLS 80

Query: 395 KSRLTSLVVLTSMAGYALAPAPFQLTTFAFCAVGTGLVSAAANSINQYHEVPFDAQMSRT 574
           K RLTSLVV+T+M GYA+APA F  TTFA C +GTGLVSAAAN+INQYHEVPFD+QMSRT
Sbjct: 81  KFRLTSLVVITTMGGYAMAPAAFDPTTFAMCTLGTGLVSAAANAINQYHEVPFDSQMSRT 140

Query: 575 K 577
           K
Sbjct: 141 K 141


>BT023904-1|ABA81838.1|  563|Drosophila melanogaster IP14421p
           protein.
          Length = 563

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 143 VPXCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 280
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 510 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRPTTSQNKKVKKELK 554


>AY113532-1|AAM29537.1|  518|Drosophila melanogaster RE60854p
           protein.
          Length = 518

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 143 VPXCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 280
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 465 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRRTTSQNKKVKKELK 509


>AE014296-574|AAN11534.1|  512|Drosophila melanogaster CG15812-PB,
           isoform B protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 143 VPXCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 280
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 459 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRRTTSQNKKVKKELK 503


>AE014296-573|AAF47724.2|  518|Drosophila melanogaster CG15812-PA,
           isoform A protein.
          Length = 518

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 143 VPXCLKHGYVGVYSKPVLFKITNNTLFQHLARISTAQNWRSKVPLK 280
           V  CL  G    ++   LF+I  +TL++HL R +T+QN + K  LK
Sbjct: 465 VHACLNEGMSQNHAAN-LFEIPKSTLWRHLQRRTTSQNKKVKKELK 509


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,348,712
Number of Sequences: 53049
Number of extensions: 513773
Number of successful extensions: 1032
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)