Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M09
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.41 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.55 
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    25   2.2  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 27.1 bits (57), Expect = 0.41
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 334  RQIRNSILVQRKEHGSGTGRQARPXEQEGRETQCGTGGGRDEETPG 471
            R I+++    ++ HG GT       E +  +  CG G G + +  G
Sbjct: 1996 RLIQHAWKRYKQRHGGGTDASGDDLEIDACDNGCGGGNGNENDDSG 2041


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.55
 Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +2

Query: 302 ENYEMLSEIGRGKFGTVY--LCREKSTGLEL 388
           +N +++S IG+GK+GTV+  +  EK   +++
Sbjct: 241 DNLKLVSMIGQGKYGTVWKGIVNEKPVAVKI 271


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 386 VPDPC-SFLCTSILFRICLVRFPRASHSSRSHPCFF 282
           +PDP  ++L + ++ R   VR     H SRS PCFF
Sbjct: 93  LPDPLVAWLRSYLMGRTYSVRM--GPHLSRSIPCFF 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,218
Number of Sequences: 2352
Number of extensions: 10288
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)