Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M06
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   1.5  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   2.0  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   2.6  
CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    24   4.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.0  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 75  THFWR*KSKKQYRNAYVFKSVE 10
           T  WR +  KQ ++ Y FKSVE
Sbjct: 245 TRQWRKEGGKQSKSRYFFKSVE 266


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +1

Query: 199 QDTALQECSDNVVFLRGVRLSEQRDSTRRRI*GARSQMEAA 321
           ++ +LQE    + +L   +L EQR+  +RR   AR + EAA
Sbjct: 51  KNESLQEQLTQLRWLMEEKLREQREDAQRREEEARRREEAA 91


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 483 IKNLDGVSTPMRRLXLTSLCLXFKH*RICLPLGHYSLRI 599
           I N+ G ++ +  + L  L    +  R+CLPL H  L I
Sbjct: 342 IGNVTGSASSIATIQLWQLSDGTQRARVCLPLAHAKLII 380


>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 35  LRYCFFDFHLQKCVPPTLNQCSETLQPRTPTQKSRKSSH 151
           L+ C F  +L K +P  L++   T    T T +   +SH
Sbjct: 4   LKSCRFGRNLAKSIPSFLSRDCTTTTESTGTDQQMANSH 42


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 73  CSANLKPMFRDLTAEDPDPEVTEIES 150
           CS  L P+  DLT E+   + TEI S
Sbjct: 86  CSVYLPPVGSDLTVEEYKRKWTEIVS 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,945
Number of Sequences: 2352
Number of extensions: 11646
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)