Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_M04
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   241   2e-64
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    54   9e-08
Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   5.0  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  241 bits (591), Expect = 2e-64
 Identities = 110/160 (68%), Positives = 135/160 (84%)
 Frame = +3

Query: 165 EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHI 344
           EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+RKA++ HL  NP+LEKLLPHI
Sbjct: 23  EYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHI 82

Query: 345 KGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALS 524
             NVGFVFT+ DL E+R KLLEN+  APA+ GAIAP  V +P  NTG+GPEKTSFFQAL 
Sbjct: 83  VENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQ 142

Query: 525 IPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 644
           IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++P
Sbjct: 143 IPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTP 182



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +2

Query: 98  MGREDKATWKSNYFVKIIQLLXRVPK 175
           M RED++TWK+NYF K+++L    PK
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPK 26


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 3/161 (1%)
 Frame = +3

Query: 165 EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKLLP 338
           +Y   FI    N+ S +   IR   + +S    GKN ++  A+     +  A  L K   
Sbjct: 36  QYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASA 95

Query: 339 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQ 515
            +KG  G +FT     EV  +  E   +  AR G +A  +VV+P    +          +
Sbjct: 96  ILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLR 155

Query: 516 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 638
            L +PTK+ KG I +     + K G+ +   +A +L    +
Sbjct: 156 KLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEV 196


>Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical
           protein T06E6.10 protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/56 (23%), Positives = 21/56 (37%)
 Frame = +1

Query: 247 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 414
           P  C+  +   C      T   ++P+  C H +  T   CSP +        C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 463 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 353
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 53  LVLKFHRSPYATLSRMGREDKATWKSNYFVK 145
           L+ K   S ++ +SR+ +EDK +  SN+++K
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK 186


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 402 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 551
           +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P  I+  T
Sbjct: 42  VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,438,310
Number of Sequences: 27780
Number of extensions: 357695
Number of successful extensions: 1094
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)