Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_L23
         (450 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0937 - 28967038-28967245,28967348-28967556,28967584-289676...    31   0.57 
11_04_0117 + 13610168-13610752,13622181-13622240,13622241-13622534     28   4.0  
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905...    27   5.3  
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365...    27   7.0  
07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,114...    27   9.2  

>03_05_0937 -
           28967038-28967245,28967348-28967556,28967584-28967644,
           28967926-28968742,28968960-28971024
          Length = 1119

 Score = 30.7 bits (66), Expect = 0.57
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +2

Query: 170 KAIFKKPASVLTHDIIYWKKLGLP--VLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYD 343
           KA+     S+L   ++  K  G P   +V        +DF PV+P  F AT +  +Q Y 
Sbjct: 144 KALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQSY- 202

Query: 344 PVTKVVAKNISKFVEAAYGG 403
              K+ AK ISK +++  GG
Sbjct: 203 ---KLAAKAISK-IQSLPGG 218


>11_04_0117 + 13610168-13610752,13622181-13622240,13622241-13622534
          Length = 312

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +2

Query: 269 DYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYG 400
           D+L    VEP+  AA    RVQ++ P T  V+    K V AA G
Sbjct: 13  DFLHGVIVEPWPGAAVPCGRVQLFRPNTTFVSAAEKKLVAAAAG 56


>03_04_0228 -
           18989688-18989807,18990300-18990345,18990452-18990552,
           18990624-18990702,18990788-18990868,18991440-18991502,
           18994171-18994246,18994980-18995246,18995994-18996076,
           18996792-18996922,18997043-18997174
          Length = 392

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +2

Query: 266 IDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGXLLVAGS 442
           ++ + F P+   +    C   V V+D + K      SK+  +     F  DG LL   S
Sbjct: 270 VNAIAFHPIYGTFATGGCDGFVNVWDGINKKRLYQYSKYASSIAALSFSKDGHLLAVAS 328


>07_03_0111 +
           13535912-13535972,13536081-13536142,13536418-13536510,
           13537577-13537649,13537876-13538265,13538337-13538404,
           13539334-13539375,13540211-13540735,13540817-13540974,
           13541078-13541636,13542438-13542500,13542579-13542680,
           13542779-13543096,13543175-13543267,13543489-13543590,
           13543678-13543782,13544190-13544323,13545097-13545280,
           13545701-13545832,13546215-13546327,13546468-13546558,
           13547138-13549339
          Length = 1889

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 182 KKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVE 295
           K P  ++   + Y+ ++ LP LV +FG+   L+ SPV+
Sbjct: 677 KSPPELIEMALKYYDEVALPKLVADFGS---LELSPVD 711


>07_01_0162 + 1138420-1138640,1138788-1138830,1139449-1140971,
            1141770-1142063,1142145-1142337,1142624-1142694,
            1142781-1144200
          Length = 1254

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -1

Query: 204  VRTDAGFLNIALFVFLKGKRD-LCHCYNVY 118
            VRTD G   +  F+ L G  D LCHC++V+
Sbjct: 1182 VRTDIGLREVDEFL-LPGAIDRLCHCHDVH 1210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,372,795
Number of Sequences: 37544
Number of extensions: 176354
Number of successful extensions: 369
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)