Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_L23
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical ... 60 6e-10
U15304-1|AAA50369.1| 407|Caenorhabditis elegans PES-10 protein. 29 1.6
AL110485-21|CAB60370.1| 407|Caenorhabditis elegans Hypothetical... 29 1.6
AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical ... 28 2.7
Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical p... 27 8.3
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 27 8.3
>AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical
protein Y23H5B.5 protein.
Length = 561
Score = 60.5 bits (140), Expect = 6e-10
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +2
Query: 152 PFKKTNKAIFKKPASVLT-HDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVR 328
P+ K + +K ++L D+IYWK++ + +E + + SP +PY+ A T SVR
Sbjct: 4 PYLPAEKFLSRKQETILLDEDVIYWKRMQQLTVFQEPAVVSSVRISPKKPYHVATTSSVR 63
Query: 329 VQVYDPVTKVVAKNISKFVEAAYGGCFRADGXLLVAGSEE 448
+ +YD V S+F + FR DG LL G +E
Sbjct: 64 LTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGGDE 103
>U15304-1|AAA50369.1| 407|Caenorhabditis elegans PES-10 protein.
Length = 407
Score = 29.1 bits (62), Expect = 1.6
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +2
Query: 140 KSRFPFKKTNKAIFKKPASVLTHDIIYWKKLGL----PVLVKEFGAIDYLDFSPVEPYYF 307
K FP A F K A L+H ++ WK L ++KEF I P E +
Sbjct: 42 KHNFPALVAEYAPFNKAAQSLSHSVLVWKNDELAQEKSYMLKEFVRICKDQHQP-EEFLL 100
Query: 308 AATCSV 325
TCS+
Sbjct: 101 RLTCSL 106
>AL110485-21|CAB60370.1| 407|Caenorhabditis elegans Hypothetical
protein Y46G5A.27 protein.
Length = 407
Score = 29.1 bits (62), Expect = 1.6
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +2
Query: 140 KSRFPFKKTNKAIFKKPASVLTHDIIYWKKLGL----PVLVKEFGAIDYLDFSPVEPYYF 307
K FP A F K A L+H ++ WK L ++KEF I P E +
Sbjct: 42 KHNFPALVAEYAPFNKAAQSLSHSVLVWKNDELAQEKSYMLKEFVRICKDQHQP-EEFLL 100
Query: 308 AATCSV 325
TCS+
Sbjct: 101 RLTCSL 106
>AL132859-6|CAB60493.3| 324|Caenorhabditis elegans Hypothetical
protein Y39C12A.7 protein.
Length = 324
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 99 FI*FCTHIHYNNGTSLVSPLKKQTKLY 179
FI C ++HY N T+ KK KLY
Sbjct: 243 FILVCPYLHYKNNTTWQHEFKKCLKLY 269
>Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical
protein F32B4.1 protein.
Length = 415
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 182 KKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPV 292
K P V WK + + ++EFGAI YLD S V
Sbjct: 177 KYPGYVRNLKSYRWKPIVIAETLREFGAIWYLDSSVV 213
>Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 90 MITFI*FCTHIHYNNGTSLVSPLKKQTKLYLKNLHQFLLTISF 218
MI+ T + Y T+ P K+T LYLK FLL SF
Sbjct: 132 MISIAILATSVDYLRETTYNIPSDKETNLYLK----FLLAFSF 170
>Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 90 MITFI*FCTHIHYNNGTSLVSPLKKQTKLYLKNLHQFLLTISF 218
MI+ T + Y T+ P K+T LYLK FLL SF
Sbjct: 132 MISIAILATSVDYLRETTYNIPSDKETNLYLK----FLLAFSF 170
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 179 FKKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKV 358
+ KP +L I + KK +K F ++Y+D + Y C+++ PV K
Sbjct: 132 WNKPEELLNAKIFFSKKFDSENKLKGFLGMEYVDDVTIRHLY----CNLKPYELHPVLKA 187
Query: 359 VAK 367
VA+
Sbjct: 188 VAQ 190
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 203 THDIIYWKKLGLPVLVKEFGAI 268
TH I+W K+G V V +FG +
Sbjct: 246 THHRIHWNKVGCHVAVTQFGNV 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,449,645
Number of Sequences: 27780
Number of extensions: 178768
Number of successful extensions: 382
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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