Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_L16
(459 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 114 1e-24
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 109 2e-23
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 100 3e-20
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 97 2e-19
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 95 6e-19
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 93 3e-18
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 87 2e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 81 1e-14
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 79 5e-14
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 78 1e-13
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 75 1e-12
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 67 2e-10
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 66 3e-10
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 66 5e-10
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 65 8e-10
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 61 1e-08
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 61 1e-08
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 59 4e-08
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 58 1e-07
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 55 8e-07
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 53 3e-06
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 48 7e-05
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 46 5e-04
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 38 0.10
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 36 0.32
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 36 0.42
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.56
UniRef50_A5JZ00 Cluster: Putative uncharacterized protein; n=1; ... 35 0.97
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 1.7
UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis s... 33 2.2
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 33 3.0
UniRef50_UPI000049857A Cluster: protein kinase; n=1; Entamoeba h... 33 3.9
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 3.9
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 3.9
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 3.9
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 3.9
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 3.9
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 3.9
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 5.2
UniRef50_A7RAU7 Cluster: Putative uncharacterized protein c143R;... 32 5.2
UniRef50_Q9VG65 Cluster: CG5538-PA; n=2; Drosophila melanogaster... 32 5.2
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 32 5.2
UniRef50_A4QR34 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S riboso... 32 6.8
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 6.8
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 6.8
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 6.8
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe... 32 6.8
UniRef50_Q4RW98 Cluster: Chromosome 9 SCAF14991, whole genome sh... 31 9.0
UniRef50_A5V0E5 Cluster: Polar amino acid ABC transporter, inner... 31 9.0
UniRef50_A4G3M6 Cluster: Putative sensor/regulator protein; n=1;... 31 9.0
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 9.0
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 114 bits (274), Expect = 1e-24
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKK 359
P KV MGK KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K
Sbjct: 50 PRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRK 109
Query: 360 LRFNTRVRFEERYKSGKNXWFFQKLRF 440
R +V+FEERYK+GKN WFFQKLRF
Sbjct: 110 ARREAKVKFEERYKTGKNKWFFQKLRF 136
Score = 98.3 bits (234), Expect = 7e-20
Identities = 45/71 (63%), Positives = 55/71 (77%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE 217
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPR GK+
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 218 *NPQEVQDKAF 250
+ + K+F
Sbjct: 61 KIAKRSKIKSF 71
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 109 bits (263), Expect = 2e-23
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 359
P KV K MGK KI KR+K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K
Sbjct: 50 PLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRK 109
Query: 360 LRFNTRVRFEERYKSGKNXWFFQKLRF 440
+ +FEERYK+GKN WFF KLRF
Sbjct: 110 ALVEVKSKFEERYKTGKNKWFFTKLRF 136
Score = 90.6 bits (215), Expect = 1e-17
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE 217
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP ++ GK+
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 99.5 bits (237), Expect = 3e-20
Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 359
P KV K+ G K+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++
Sbjct: 50 PSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREE 109
Query: 360 LRFNTRVRFEERYKSGKNXWFFQKLRF 440
+ + FEER+++GKN WFF KLRF
Sbjct: 110 AKKVVKKAFEERHQAGKNQWFFSKLRF 136
Score = 74.1 bits (174), Expect = 1e-12
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE 217
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP ++ G +
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 218 *NPQEVQDKAF 250
+ + K F
Sbjct: 61 KVAKRTKIKPF 71
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 97.1 bits (231), Expect = 2e-19
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 359
P KV KRMG KI KRSK+KPFVKV++YNHLMPTRY ++ K + K+P++R+
Sbjct: 104 PQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQRED 163
Query: 360 LRFNTRVRFEERYKSGKNXWFFQKLRF 440
+ + FEE+Y SGKN WFF LRF
Sbjct: 164 AKKQIKQIFEEKYTSGKNKWFFTPLRF 190
Score = 39.1 bits (87), Expect = 0.045
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 65 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDG 211
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+ + G
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMG 112
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 95.1 bits (226), Expect = 6e-19
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKK 359
P KV +RMGK + KRS+IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+
Sbjct: 100 PLKVTRRMGKKMVEKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTRED 159
Query: 360 LRFNTRVRFEERYKSGKNXWFFQKLRF 440
+ + E+RY SGKN WFF LRF
Sbjct: 160 AKKTVKKALEDRYTSGKNRWFFTPLRF 186
Score = 59.3 bits (137), Expect = 4e-08
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 44 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE 217
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP + GK+
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKK 110
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 92.7 bits (220), Expect = 3e-18
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPR 190
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPR 51
Score = 39.1 bits (87), Expect = 0.045
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVK 257
P +V +RM K ++HKRSKIKPF+K
Sbjct: 50 PRRVTRRMNKTRLHKRSKIKPFIK 73
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 86.6 bits (205), Expect = 2e-16
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE 217
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPR GK+
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 218 *NPQEVQDKAF 250
+ + KAF
Sbjct: 61 KFERRTRVKAF 71
Score = 72.9 bits (171), Expect = 3e-12
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKR 353
P KV MGK K +R+++K F K +NYNHLM TRY+V F +K F K+ + R
Sbjct: 50 PRKVTATMGKKKFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDR 109
Query: 354 KKLRFNTRVRFEERYKSGKNXWFFQKLRF 440
K+ + + ER+ + KN WFF KLRF
Sbjct: 110 KEFKKELQTVMRERFLAAKNRWFFTKLRF 138
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 81.0 bits (191), Expect = 1e-14
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +3
Query: 192 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRF 368
+V K+M + K KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 369 NTRVRFEERYKSGKNXWFFQKLRF 440
+ EER+K+GK+ WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 70.5 bits (165), Expect = 2e-11
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +2
Query: 53 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPR 190
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PR
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPR 69
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 79.0 bits (186), Expect = 5e-14
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 365
P KV + M K I +RS++ F++VVN+ H +PTRY +D S E ++ D +K+ + +
Sbjct: 49 PKKVVRGMSKRTIQRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSK 108
Query: 366 FNTRVRFEERYKSGKNXWFFQKLRF 440
R F+ RY +G N WFFQ+LRF
Sbjct: 109 QLVRKLFQARYNAGSNRWFFQRLRF 133
Score = 72.5 bits (170), Expect = 4e-12
Identities = 27/49 (55%), Positives = 41/49 (83%)
Frame = +2
Query: 44 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPR 190
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPK 50
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 77.8 bits (183), Expect = 1e-13
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 365
P KV + M K I +RS++ F++VVN+ H +PTRY VD S E ++ D +KR + +
Sbjct: 50 PKKVVRGMSKQTIARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSK 109
Query: 366 FNTRVRFEERYKSGKNXWFFQKLRF 440
R F+ RY +G + WFFQ+LRF
Sbjct: 110 RLVRHVFQARYNAGSSMWFFQRLRF 134
Score = 70.5 bits (165), Expect = 2e-11
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPR 190
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPK 51
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 74.5 bits (175), Expect = 1e-12
Identities = 30/51 (58%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
Frame = +2
Query: 44 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPR 190
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPR 54
Score = 70.1 bits (164), Expect = 2e-11
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDP 344
P + + M + I KR+ I+ FVKVVNYNH+MPTRY + E F+ +
Sbjct: 53 PRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQV 112
Query: 345 AKRKKLRFNTRVRFEERYKSGKNXWFFQKLRF 440
AKR R + FE ++K+GK+ WFF KLRF
Sbjct: 113 AKRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 66.9 bits (156), Expect = 2e-10
Identities = 26/51 (50%), Positives = 40/51 (78%)
Frame = +2
Query: 35 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 187
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAP 67
Score = 60.5 bits (140), Expect = 2e-08
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 11/96 (11%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEK-FSAKDLKDPAKRKK 359
P KVHKR+ K K+ K+S IKPF+K +N NH+MPTRY V DF + D+++ +K+
Sbjct: 67 PLKVHKRLSKEKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIKPLLQGIDMQEADGKKQ 126
Query: 360 ------LRFNTR-VRFE-ERYKSGKNXWFFQK-LRF 440
L FN + + + E+ K+ K+ F +K LRF
Sbjct: 127 ALRALHLAFNDKLINIQSEKGKAPKDLIFLRKPLRF 162
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 66.1 bits (154), Expect = 3e-10
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 18/103 (17%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 341
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 949 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKN 1008
Query: 342 PAKRKKLRFNTRVRFEERY----------KSGKNXWFFQKLRF 440
KRK+LR N R E+Y K ++ + F KLRF
Sbjct: 1009 VEKRKELRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 1051
Score = 65.7 bits (153), Expect = 5e-10
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +2
Query: 35 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGK 214
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPR + G+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 215 E 217
+
Sbjct: 959 K 959
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 65.7 bits (153), Expect = 5e-10
Identities = 25/62 (40%), Positives = 45/62 (72%)
Frame = +2
Query: 32 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDG 211
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+ + G
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 212 KE 217
+
Sbjct: 74 SK 75
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 183 TPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTR 290
+P KV KRMG KI KR+ +KPF+K VN NH+MPTR
Sbjct: 64 SPKKVTKRMGSKKIQKRTSVKPFIKYVNLNHIMPTR 99
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 64.9 bits (151), Expect = 8e-10
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKD 341
P KV KRMG+ +I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+
Sbjct: 160 PRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKEAELKN 219
Query: 342 PAKRKKLRFNTRVRFEERY----------KSGKNXWFFQKLRF 440
KRK LR N R E+Y K ++ + F KLRF
Sbjct: 220 VEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRFLFSKLRF 262
Score = 32.7 bits (71), Expect = 3.9
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 35 KMGKIMKPGKVVLVLSGRYAG 97
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 61.3 bits (142), Expect = 1e-08
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRK 356
P KV K+M KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK
Sbjct: 50 PMKVTKKMSSKKIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRK 109
Query: 357 KLRFNTRVRFEERYKSGKN 413
+ R + + EE + + +N
Sbjct: 110 EARKSVKAVLEECFSNPEN 128
Score = 59.3 bits (137), Expect = 4e-08
Identities = 27/71 (38%), Positives = 47/71 (66%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE 217
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P ++ +
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 218 *NPQEVQDKAF 250
+ ++ KAF
Sbjct: 61 KIEKRLKLKAF 71
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 60.9 bits (141), Expect = 1e-08
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = +2
Query: 50 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 187
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHP 142
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 293
P KV K+M K KI KRSK+K FVK +N NH++PTRY
Sbjct: 142 PLKVTKKMSKGKIIKRSKVKAFVKYINVNHILPTRY 177
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 59.3 bits (137), Expect = 4e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYP 187
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAP 50
Score = 57.2 bits (132), Expect = 2e-07
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFS-AKDLK----DPAK 350
P K+ ++M R+ +K F KV+N NH+MPT+YTV + E+F+ K +K + K
Sbjct: 50 PLKITRKMSAKVQEMRTSVKSFCKVINVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGK 107
Query: 351 RKKLRFNTRV--RFEERYKSGKNXWFFQKLRF 440
+ + +F E Y+ GK W F KLRF
Sbjct: 108 VYPISQKKAISSQFAEEYRKGKESWLFTKLRF 139
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 57.6 bits (133), Expect = 1e-07
Identities = 25/68 (36%), Positives = 45/68 (66%)
Frame = +2
Query: 47 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE*NP 226
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+ ++ E
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 227 QEVQDKAF 250
++ Q K F
Sbjct: 63 KKTQVKLF 70
Score = 57.6 bits (133), Expect = 1e-07
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDP 344
P KV K M + K++++K FVK VN+NH+M TR+ V DF F+K S + LKD
Sbjct: 49 PKKVTKDMPTEVLVKKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDA 107
Query: 345 AKRKKLRFNTRVRFEERYKSGKNXWFFQKLRF 440
+K L ++Y + K WFF+ L+F
Sbjct: 108 PAKKALLTEYAAVLRQKYLNNKMAWFFKPLQF 139
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = +3
Query: 210 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 389
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 390 ERYKSGKNXWFFQKLRF 440
E KSG+N WFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 52.8 bits (121), Expect = 3e-06
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKL 362
P ++ M + R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++
Sbjct: 48 PRRITNSMSDEEAVCRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREI 107
Query: 363 RFNTRVRFEERYKSGKNXWFFQKL 434
F+ R ++ WFF KL
Sbjct: 108 IETVNKDFQRRILEHRDTWFFTKL 131
Score = 39.9 bits (89), Expect = 0.026
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 47 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPR 190
I+KPG V +VL GR+AG+KA++V+ ++ +A VAGI PR
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPH---NERGSYAIVAGIAALPR 49
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 48.4 bits (110), Expect = 7e-05
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3
Query: 186 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK 317
P K+ +GK KI KRSKIK FV V NYNHL RY+VD +K
Sbjct: 35 PRKLTAALGK-KISKRSKIKFFVAVYNYNHLKSIRYSVDIPLDK 77
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2
Query: 95 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE 217
G +I+ + D+GTSDK Y HA VAGID YPR GK+
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGKK 45
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 45.6 bits (103), Expect = 5e-04
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Frame = +3
Query: 192 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVD-----------FSFEKFSAKDLK 338
K+ M K KI + K F+K +N H+ PTRY ++ + K K +
Sbjct: 50 KIKYNMSKRKIISNLRFKTFIKTINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNE 109
Query: 339 DPAKRKKLRF-NTRVRFEERYKSGKNXWFFQKLRF 440
++ K+ + ++R GKN WFF+K++F
Sbjct: 110 HTNEKAKVNLVSINNYLQDRLLRGKNLWFFKKMKF 144
Score = 40.7 bits (91), Expect = 0.015
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKN 121
M I K G+VV+VLSG+YAG+KA V+KN
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKN 28
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 37.9 bits (84), Expect = 0.10
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +2
Query: 59 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQ 238
GK++ L+G+YAG+ +VK+Y + + K + H V + + + + + Q
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTN-TKFTNKNSKSFISKMNDQ 66
Query: 239 DKAFRQGCKLQSLDAN 286
K F+ KL+ L+AN
Sbjct: 67 PKIFKYKIKLKILNAN 82
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 36.3 bits (80), Expect = 0.32
Identities = 11/36 (30%), Positives = 28/36 (77%)
Frame = +2
Query: 26 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 133
+P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 35.9 bits (79), Expect = 0.42
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 228 KRSKIKPFVKVVNYN--HLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERY 398
KR K ++ + YN HL+ TRY D ++D A+ KK+ N T+ + +
Sbjct: 53 KRRNAKFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAW 112
Query: 399 KSGKNXWFFQKLRF 440
K K + F L F
Sbjct: 113 KENKAKFLFSSLSF 126
Score = 33.5 bits (73), Expect = 2.2
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 56 PGKVVLVLSGRYAGRKAIVVKNYDE 130
P +V+V SG+ AG+KA+V+K DE
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE 29
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.56
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 44 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 133
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_A5JZ00 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 739
Score = 34.7 bits (76), Expect = 0.97
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Frame = +3
Query: 150 TGMPSSLVSTGTPGKVHKRMGKNK--IHKRSKIKP---FVKVVNYNHLM------PTRYT 296
T P+++ + GK+H + N+ + K + I+P FVK NY ++ P+
Sbjct: 275 TDKPTAITPSDDFGKLHNSINVNRQPVKKPTIIRPVDGFVKQQNYQNVNKQSTKEPSLVD 334
Query: 297 VDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKSGKNXWFFQKL 434
FEK ++ K P +++ + FE+RY + K+ ++ +KL
Sbjct: 335 STDDFEKLHNSLSYKKPNEKRSSAYRDNDNFEKRYSTLKDDFYSEKL 381
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 26 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGID 178
Y + +I + V +V++ RY G+ + E D+P GHAF AG+D
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVD 262
>UniRef50_Q5B7I5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1480
Score = 34.3 bits (75), Expect = 1.3
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 174 STGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR 353
S+ TP + +R+G + S IK ++ V +H++PTRY + A L A R
Sbjct: 920 SSDTPADILQRLGDVNVSTMSHIKQQLEQVMPHHMVPTRYQIWARMPTSLAGKLDRKALR 979
Query: 354 KKL 362
K+L
Sbjct: 980 KEL 982
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 1.7
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +2
Query: 29 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 136
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis
serovar tenebrionis|Rep: Helicase - Bacillus
thuringiensis subsp. tenebrionis
Length = 767
Score = 33.5 bits (73), Expect = 2.2
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -2
Query: 392 LFKTYSRVETQLLTLSRVFQV-FCAEFFKTEVNCITCWHQVIVVYNLDERLYLGPLVDFI 216
LF+ Y + + LT+ + F ++FF+ E N I C + +I ++ R L L+ +
Sbjct: 445 LFREYDLQDYKSLTIHKTCASNFNSKFFRNEYNIIDCAYLIIDEVSMIPREILSKLLQAV 504
Query: 215 LSHPLVHFXG 186
SH + F G
Sbjct: 505 PSHVKIIFAG 514
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 33.1 bits (72), Expect = 3.0
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 174 IPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEG 28
IP+T A PY S+ + + YR ++ S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_UPI000049857A Cluster: protein kinase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
histolytica HM-1:IMSS
Length = 1719
Score = 32.7 bits (71), Expect = 3.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 121 ILDYDSLATRVPAT*DQHYFTRLHYLTHLGGIFPLLVDN 5
+L +D+ T +P + F H HL GIF +L+DN
Sbjct: 1382 VLTFDTKTTEIPEGCELEVFINPHCSVHLIGIFKILIDN 1420
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 3.9
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 29 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 133
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 3.9
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 29 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 133
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 3.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 282 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 368
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 3.9
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = +2
Query: 29 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 133
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 3.9
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 29 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 133
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 3.9
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 38 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 130
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 32.3 bits (70), Expect = 5.2
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 207 MGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 386
+GK K K+ K K + + HL+ ++ T + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 387 EER 395
EER
Sbjct: 61 EER 63
>UniRef50_A7RAU7 Cluster: Putative uncharacterized protein c143R;
n=1; Chlorella virus AR158|Rep: Putative uncharacterized
protein c143R - Chlorella virus AR158
Length = 80
Score = 32.3 bits (70), Expect = 5.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 401 FVPLFKTYSRVETQLLTLSRVFQVFCAEFFKTEVNCI 291
F+P+ K + + +L L R F +F E F VNC+
Sbjct: 41 FLPVSKMSDMLSSMILLLRRNFLIFSVEIFSRSVNCV 77
>UniRef50_Q9VG65 Cluster: CG5538-PA; n=2; Drosophila
melanogaster|Rep: CG5538-PA - Drosophila melanogaster
(Fruit fly)
Length = 387
Score = 32.3 bits (70), Expect = 5.2
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +3
Query: 96 VARLS*SRITTKVPPTSRTGMPSSLVST-GTPGKVHKRMGKNKIHKR--SKIKPF---VK 257
V RL S+ + R GMP+ + G PG+ H+R +N KR ++ P+ K
Sbjct: 68 VRRLGSSKYSLSTIVYGRLGMPNPIAHPPGNPGRPHRRAAQNARQKRPVGRLDPWKSVSK 127
Query: 258 VVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYK 401
+++ + L T T K + K K+K++ N R+ +YK
Sbjct: 128 ILSEDSLSGTEMT---KMRKRMRTNTKRVVKKKRIP-NRRLSRARKYK 171
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 32.3 bits (70), Expect = 5.2
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +2
Query: 20 REYPS--KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 133
R+Y S K+ + +KPG V+++L+G Y G++ +++K G
Sbjct: 32 RKYASVPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSG 71
>UniRef50_A4QR34 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 356
Score = 32.3 bits (70), Expect = 5.2
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +3
Query: 141 TSRTGMPSSLVSTGTPGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF 320
T T +PS T K K+ GK K ++R ++KP ++ ++ + Y +D+ E
Sbjct: 264 TEITSLPSLETDAKTKKKKKKKGGKGK-NRRQEVKPDLRKRTWDVVDVGMYNLDYDGEAG 322
Query: 321 SAKDLKDPAKRKK 359
SA + AKR++
Sbjct: 323 SASHEGNLAKRRQ 335
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 32.3 bits (70), Expect = 5.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 303 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 404
FSFE+F A +PA R +RF R R E +S
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETES 492
>UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L32 - Macaca mulatta
Length = 199
Score = 31.9 bits (69), Expect = 6.8
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 117 RITTKVPPTSRTGMPSSLVSTGTPGKVHKRMG-KNKIHKRSKIKPFVKVVNYNHLMPTRY 293
R T P +S+T M S L TG +V G N+IH+R K + + + Y ++
Sbjct: 74 RGTRHSPGSSQTDM-SKLSVTGRHLEVLTTRGIDNRIHRRFKSQFLMSNIGYGSNKKIKH 132
Query: 294 TVDFSFEKFSAKDLKD 341
T+ S +KF ++K+
Sbjct: 133 TLPSSLQKFLVHNIKE 148
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 6.8
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 213 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 362
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 6.8
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 23 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 118
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 6.8
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +2
Query: 56 PGKVVLVLSGRYAGRKAIVVKNYDEG 133
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
hookeri (Hooker's evening primrose)
Length = 2434
Score = 31.9 bits (69), Expect = 6.8
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 273 HLMPTRYTVDFS-FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNXW 419
HL RY + + +F K+LKD + ++L F+++++ + SGKN W
Sbjct: 1628 HLDKLRYVLQYDGTSRFLKKELKDYFEAQEL-FHSKLKHKNSLNSGKNQW 1676
>UniRef50_Q4RW98 Cluster: Chromosome 9 SCAF14991, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1141
Score = 31.5 bits (68), Expect = 9.0
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 90 TRVARLS*SRITTKVPPTSRTGMPSSLVSTGTPGKVHKRMGKNKIHKR--SKIKPFVKVV 263
+R A+ + P SR+G+ VS G P V K G R SK+KP K V
Sbjct: 34 SRPAKAGKGKQAVSAAPGSRSGLEPGCVSGGVPAPVSKSAGGQGSGSRLSSKVKPVTKGV 93
Query: 264 NY 269
+
Sbjct: 94 TH 95
>UniRef50_A5V0E5 Cluster: Polar amino acid ABC transporter, inner
membrane subunit; n=1; Roseiflexus sp. RS-1|Rep: Polar
amino acid ABC transporter, inner membrane subunit -
Roseiflexus sp. RS-1
Length = 403
Score = 31.5 bits (68), Expect = 9.0
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 226 WILFFPILLCTXPGVPVDTSD-EGMPVRLVGGTFVVIL 116
WIL+FPIL GV D S +P L GG + +L
Sbjct: 167 WILYFPILFVLVSGVGADDSPIPPVPTNLWGGLLLTLL 204
>UniRef50_A4G3M6 Cluster: Putative sensor/regulator protein; n=1;
Herminiimonas arsenicoxydans|Rep: Putative
sensor/regulator protein - Herminiimonas arsenicoxydans
Length = 818
Score = 31.5 bits (68), Expect = 9.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 199 CTXPGVPVDTSDEGMPVRLVGGTFVVILDYDS 104
C P V VDT+ GMP+ V G F I Y S
Sbjct: 269 CVNPIVIVDTATPGMPLIYVNGAFETITGYSS 300
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 35 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKP 148
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,717,570
Number of Sequences: 1657284
Number of extensions: 8429273
Number of successful extensions: 27030
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 26148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27003
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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