Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_L13
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   5.9  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 140 RPFDEEESSLK*HGLSCTGASSKRAKRKNKQ 232
           RPFDE E  L   G+S    +  +A  + KQ
Sbjct: 730 RPFDERELELLISGISKIDVNDWKANTRLKQ 760


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 245 LVRFFACSSSWPFLNL 198
           L+R F  + SWP LNL
Sbjct: 903 LLRVFKLAKSWPTLNL 918


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -3

Query: 233 FACSSSWPFLNLRLYRTVHVTLARIPPHQMGGFT 132
           F CS S+  LNLR+  T H   A  P   + GFT
Sbjct: 312 FWCSISYYELNLRVGETFH---ASQPSITVDGFT 342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,999
Number of Sequences: 2352
Number of extensions: 7166
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)