Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_L07
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...   100   2e-21
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    31   0.81 
U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p...    28   4.3  
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p...    28   4.3  
Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AC090999-25|AAK26157.2|  921|Caenorhabditis elegans Hypothetical...    27   10.0 

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 55/133 (41%), Positives = 78/133 (58%), Gaps = 9/133 (6%)
 Frame = +2

Query: 206 DIQIEGFNPSAEEA--DEGTDSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKXV 379
           +I + G NPSAEE   D+G+D  VE G+DIVLNH+LVE   + D   +  Y+K +MK  +
Sbjct: 41  EIVLAGSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVI 100

Query: 380 AKLEXKAPDQ--VEVFKTNMNKVMKDILG--RFKELQFFTGESM---DXDGMVAMMEYRD 538
             +E    D+  V+ FK  +   +  +L   RFK L FF GE       +G VA++EYRD
Sbjct: 101 DHMEKNNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRD 160

Query: 539 FDGTQIPIMMFFK 577
            DGT++P +M  K
Sbjct: 161 VDGTEVPTLMLVK 173



 Score = 38.3 bits (85), Expect = 0.004
 Identities = 15/30 (50%), Positives = 23/30 (76%)
 Frame = +1

Query: 115 DEMFSDTYKMKLVDEVIYEVTGRLVTRAQG 204
           DE+ SD++ MKLVD+++YE  G+ V R +G
Sbjct: 11  DELSSDSFPMKLVDDLVYEFKGKHVVRKEG 40


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 439 FVHVCFKYFNLVRRLLFQFCYXFFHI 362
           F+++C +Y    RR L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical
           protein F09F9.5 protein.
          Length = 219

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 391 FQFCYXFFHIVFEVQCVGFLVTEGVCF 311
           +Q C+ F H+      +GF    GVCF
Sbjct: 53  YQTCFGFMHVKIATCSIGFFALLGVCF 79


>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 224  FNPSAEEADEGTDSAVESG-VDIVLNH 301
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
            protein F30A10.10 protein.
          Length = 1262

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 224  FNPSAEEADEGTDSAVESG-VDIVLNH 301
            F+PSA +ADE  D A E G VD  L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262


>Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical
           protein B0024.6 protein.
          Length = 1161

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -3

Query: 588 VDHGLKNIMIGIXVPSKSLYSIMATMPSXSIDSPVKN*SSLNLPRMSFITLFMFVLNTST 409
           +DH   N  IG+ + +  LYS+       S+   ++  +S+ +      +L   ++N  T
Sbjct: 668 IDHANLNKFIGMSLDAPQLYSVWRFCSRGSLADVIRK-ASMQMDGFFIYSLMKDIINGLT 726

Query: 408 W 406
           W
Sbjct: 727 W 727


>AC090999-25|AAK26157.2|  921|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.18 protein.
          Length = 921

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
 Frame = +2

Query: 206 DIQIEGFNPSAEEADEGTDSAVESG-VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKXV- 379
           DI+++   PS EEA+E T   +E G  + V N +  +      +K+  LYL++ +K+ + 
Sbjct: 673 DIEVKIARPSGEEAEEMT--LIEVGPKNPVKNSQNAQKLPKNAEKTTQLYLEEKLKEQLG 730

Query: 380 ---AKLEXKAPDQVEVFKTNMNKVMKDILGRFKEL 475
              AK + +   + ++ K        D L   KEL
Sbjct: 731 GPSAKTQKRRQRKEKLAKMKYKDQTDDDLELHKEL 765


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,317,513
Number of Sequences: 27780
Number of extensions: 234090
Number of successful extensions: 582
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)