Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_L02
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    57   8e-11
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    24   0.65 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.1  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 57.2 bits (132), Expect = 8e-11
 Identities = 31/77 (40%), Positives = 43/77 (55%)
 Frame = +2

Query: 215 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 394
           G+ +  +R + +P V   +  H+ P       S      K  K P KRK++RF TRV+ +
Sbjct: 19  GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78

Query: 395 ERYKSGKNKWFFQKLRF 445
           E  KSG+NKWFFQK RF
Sbjct: 79  EGSKSGRNKWFFQKGRF 95


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 194 GGTCRYQRRRHARTACSEVPSS*FLTTIALRPAYRPLK 81
           GGT    RRR   TA S    + F  TIAL   Y+PL+
Sbjct: 169 GGTTGKLRRRS--TAASRSRLAAFKRTIALGAFYQPLQ 204


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 248 KPFVKVVNYNHLMPTRY 298
           K F  +VN  HL+ T+Y
Sbjct: 83  KNFTNIVNLTHLLETQY 99


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 103  DPRTGHLRPALLYPASL 53
            D +TGH+ P   YP  +
Sbjct: 2520 DKQTGHVAPLYYYPGDV 2536



 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 140 PPNKPYGHAFVAGIDRYPR 196
           PP KPYG     GI   P+
Sbjct: 552 PPTKPYGTCRSEGIFSDPK 570


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 29  NIPPRWV 49
           N+PPRW+
Sbjct: 696 NVPPRWI 702


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,751
Number of Sequences: 336
Number of extensions: 2505
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)