Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_L02
(491 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0951 - 21769342-21769752 102 1e-22
02_02_0470 - 10700092-10700505 101 3e-22
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 35 0.031
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394... 31 0.50
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 30 1.2
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 30 1.2
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 29 1.5
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 29 2.7
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 2.7
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 28 3.5
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 28 4.7
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 28 4.7
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 28 4.7
04_04_0371 + 24771687-24772081,24772139-24772535,24773394-247734... 28 4.7
01_01_0249 + 2047793-2048561,2049861-2049896,2050068-2051012,205... 28 4.7
10_02_0059 + 4785858-4786988 27 6.2
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 27 6.2
09_02_0555 - 10588685-10592038 27 6.2
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 27 6.2
03_02_1029 - 13488535-13493037 27 6.2
08_01_0775 - 7531397-7531564,7531590-7532771 27 8.2
04_04_1327 + 32677408-32677460,32677563-32677658,32677737-326778... 27 8.2
01_01_0469 - 3456067-3456123,3456414-3456565,3456649-3456779,345... 27 8.2
>10_08_0951 - 21769342-21769752
Length = 136
Score = 102 bits (245), Expect = 1e-22
Identities = 45/102 (44%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Frame = +2
Query: 146 NKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF 325
++PYGH VAG+ +YP+KV ++ K K+S++K F+K+VN+ HLMPTRYT+D ++
Sbjct: 35 DRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEV 94
Query: 326 SAKDLKDPAKRKKLRF--NTRVRFEERYKSGKNKWFFQKLRF 445
+A + KK+ + + R E+R+K+GKN+WFF KLRF
Sbjct: 95 AAGPDALATRDKKVAACKSAKARLEDRFKTGKNRWFFTKLRF 136
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = +1
Query: 43 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQAVRACLRRWYRQVPPESAQEDGKE 222
M K +KPGK V++L GR+AGRKA++V+ ++EGT ++ CL + P + ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 223 *NPQEVQDKAF 255
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
>02_02_0470 - 10700092-10700505
Length = 137
Score = 101 bits (242), Expect = 3e-22
Identities = 47/103 (45%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Frame = +2
Query: 146 NKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF 325
++PYGH VAG+ +YP+KV ++ K K+S++K F+K+VN+ H+MPTRYT+D F+
Sbjct: 35 DRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDV 94
Query: 326 SAKDLKDPAKR-KKLRF--NTRVRFEERYKSGKNKWFFQKLRF 445
++ A R KK+ + R EER+K+GKN+WFF KLRF
Sbjct: 95 ASGGPDALATRDKKVAACKAAKARLEERFKTGKNRWFFTKLRF 137
Score = 57.2 bits (132), Expect = 7e-09
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = +1
Query: 43 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQAVRACLRRWYRQVPPESAQEDGKE 222
M K +KPGK V++L GRYAGRKA++V+ ++EGT ++ CL + P + ++D +
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 223 *NPQEVQDKAF 255
++ + K F
Sbjct: 61 KTAKKSRVKCF 71
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 35.1 bits (77), Expect = 0.031
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 16 TT*REYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 138
+T + P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 62 STRKANPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>01_01_0538 -
3938389-3939727,3939828-3940203,3940299-3940516,
3940607-3940769,3940866-3941100,3941186-3941353
Length = 832
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 128 TTKVPPNKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNH 280
T+ VPP+ PY + G RYP + + KN + R + N NH
Sbjct: 614 TSSVPPSPPYRVTGMYGTPRYPAEKSVLLKKNNVIHRQGVGRSEGDANMNH 664
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 313 TEVNCITCWHQVIVVYNLDERLYLGPLVDFILSHPLVHF 197
TE + WH++I YNL++ +YL + D V+F
Sbjct: 312 TEEEFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 313 TEVNCITCWHQVIVVYNLDERLYLGPLVDFILSHPLVHF 197
TE + WH++I YNL++ +YL + D V+F
Sbjct: 310 TEEEFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 117 SQELRRRYLRTSRTGMPSSLVSTGTPGKCTRGWERIKSTRG 239
S +L +++ T R +P S++ G G C GW + + G
Sbjct: 123 SPQLSFKHVYTRRAVVPGSIIVDGGSGYCKYGWSKYAAPSG 163
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKLKSTV*RV 289
R+FL LAG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 43 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 138
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 179 IDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF----EKFSAKDLK 343
I Y R++ M ++ + K+K F +NY+H R T ++ E S KDLK
Sbjct: 919 IGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLK 977
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKLKSTV*RV 289
R+FL LAG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKL 310
R+FL LAG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKLKSTV*RV 289
R+FL LAG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>04_04_0371 +
24771687-24772081,24772139-24772535,24773394-24773435,
24773571-24774305,24775357-24775480,24775613-24776580,
24776917-24776925
Length = 889
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 103 DPRTGHLRPALLYPASLSYPSWRDIPFTSL 14
DP TG L P + P L++PS +P S+
Sbjct: 614 DPATGSLVPVVSLPEKLTFPSCDGLPTPSV 643
>01_01_0249 +
2047793-2048561,2049861-2049896,2050068-2051012,
2051215-2051264
Length = 599
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 248 LSWTSCGFYSFPSSCALSGGTCRYQRRRHARTAC 147
L W GF +C SGG CRY A AC
Sbjct: 211 LEWQKNGFGDC-DACNASGGQCRYNNDSAAAFAC 243
>10_02_0059 + 4785858-4786988
Length = 376
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKL 310
R+FL LAG +R F NFSK+
Sbjct: 224 RSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKL 310
R+FL LAG +R F NFSK+
Sbjct: 281 RSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKL 310
R+FL LAG +R F NFSK+
Sbjct: 411 RSFLGLAGYYRRFIENFSKI 430
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKL 310
R+FL LAG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKL 310
R+FL LAG +R F NFSK+
Sbjct: 794 RSFLGLAGYYRRFIENFSKI 813
>08_01_0775 - 7531397-7531564,7531590-7532771
Length = 449
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 369 RNFLRLAGSFRSFALNFSKL 310
R FL LAG +R F NFSK+
Sbjct: 90 RRFLGLAGYYRRFIENFSKI 109
>04_04_1327 +
32677408-32677460,32677563-32677658,32677737-32677811,
32678446-32678520,32678615-32678837,32678931-32679174,
32679740-32680197,32680276-32680470,32680660-32681361
Length = 706
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 358 TLSRVFQVFCAEFFKTEVNCITCWHQVIVVYNLDERLYLGPLVDFILSHPLVHF 197
T +VF + TE + WH++I YNL++ + L + D V+F
Sbjct: 298 TFKKVFHKVLTQTL-TEEEFVAAWHKLIRDYNLEKSVNLRHIWDIRRKWAFVYF 350
>01_01_0469 -
3456067-3456123,3456414-3456565,3456649-3456779,
3456846-3458036,3458460-3458541,3458947-3458984,
3459091-3459250,3459356-3459557,3460245-3460329,
3460809-3460863,3461230-3461325,3461807-3461940,
3462031-3462043,3462315-3462419,3462935-3463121
Length = 895
Score = 27.1 bits (57), Expect = 8.2
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +2
Query: 194 RKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF 373
R H R+ N + S+ ++ N PT F + KD P +R R
Sbjct: 292 RSKHGRLDDNLTDENSERLWKMEPFNSEDRFPTPIVEQFDTRDYGFKDRYSPEQRTSTRT 351
Query: 374 NTR 382
NTR
Sbjct: 352 NTR 354
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,115,448
Number of Sequences: 37544
Number of extensions: 270072
Number of successful extensions: 851
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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