Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_L02
(491 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p pro... 171 4e-43
AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA... 171 4e-43
AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-P... 33 0.28
AY071109-1|AAL48731.1| 247|Drosophila melanogaster RE16487p pro... 31 0.85
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 31 0.85
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 31 0.85
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 31 0.85
AE014297-2140|AAF55268.1| 247|Drosophila melanogaster CG5013-PA... 31 0.85
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 29 4.5
>AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p
protein.
Length = 135
Score = 171 bits (416), Expect = 4e-43
Identities = 77/102 (75%), Positives = 85/102 (83%), Gaps = 1/102 (0%)
Frame = +2
Query: 143 PNKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFE 319
P KP+GHA VAGIDRYPRKV K+MGKNK+ K+SK+KPF+K +NYNHLMPTRYT D SFE
Sbjct: 34 PEKPFGHALVAGIDRYPRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFE 93
Query: 320 KFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 445
K S KDLKDP KRK RF TRV+FE YK GKNKWFFQKLRF
Sbjct: 94 KLSPKDLKDPVKRKTHRFQTRVKFESVYKEGKNKWFFQKLRF 135
Score = 60.9 bits (141), Expect = 9e-10
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 43 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQAVRACLRRWYRQVPPESAQEDGKE 222
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT E+ L + P + ++ GK
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 223 *NPQEVQDKAFRQGCKLQSLDANTL 297
++ + K F L+SL+ N L
Sbjct: 61 KLKKKSKVKPF-----LKSLNYNHL 80
>AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA
protein.
Length = 135
Score = 171 bits (416), Expect = 4e-43
Identities = 77/102 (75%), Positives = 85/102 (83%), Gaps = 1/102 (0%)
Frame = +2
Query: 143 PNKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFE 319
P KP+GHA VAGIDRYPRKV K+MGKNK+ K+SK+KPF+K +NYNHLMPTRYT D SFE
Sbjct: 34 PEKPFGHALVAGIDRYPRKVTKKMGKNKLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFE 93
Query: 320 KFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 445
K S KDLKDP KRK RF TRV+FE YK GKNKWFFQKLRF
Sbjct: 94 KLSPKDLKDPVKRKTHRFQTRVKFESVYKEGKNKWFFQKLRF 135
Score = 60.9 bits (141), Expect = 9e-10
Identities = 37/85 (43%), Positives = 52/85 (61%)
Frame = +1
Query: 43 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSEQAVRACLRRWYRQVPPESAQEDGKE 222
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT E+ L + P + ++ GK
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 223 *NPQEVQDKAFRQGCKLQSLDANTL 297
++ + K F L+SL+ N L
Sbjct: 61 KLKKKSKVKPF-----LKSLNYNHL 80
>AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-PA
protein.
Length = 506
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 287 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 373
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>AY071109-1|AAL48731.1| 247|Drosophila melanogaster RE16487p
protein.
Length = 247
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 73 VLVLSGRYAGRKAIVVKNYDEGTSEQAVRACLRRWYRQVPPESAQEDGKE 222
V L R AG K I Y E +++ ++ A L++W Q P S ++ GKE
Sbjct: 169 VAFLLERNAGAKFIFT--YQERSADWSIEALLKKWKLQALPISMEDIGKE 216
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 31.1 bits (67), Expect = 0.85
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Frame = +1
Query: 28 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG----TSEQAVRAC-LRR-WYRQV 189
E+ + + PG V+++L+GR+ G++ +++K G T A+ +C LRR R V
Sbjct: 105 EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYV 164
Query: 190 PPESAQED-GKE*NPQEVQDKAFRQ 261
S++ D G P+ + D FR+
Sbjct: 165 IGTSSKVDLGAFKVPEHLNDAYFRR 189
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 31.1 bits (67), Expect = 0.85
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Frame = +1
Query: 28 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG----TSEQAVRAC-LRR-WYRQV 189
E+ + + PG V+++L+GR+ G++ +++K G T A+ +C LRR R V
Sbjct: 105 EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYV 164
Query: 190 PPESAQED-GKE*NPQEVQDKAFRQ 261
S++ D G P+ + D FR+
Sbjct: 165 IGTSSKVDLGAFKVPEHLNDAYFRR 189
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 31.1 bits (67), Expect = 0.85
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Frame = +1
Query: 28 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG----TSEQAVRAC-LRR-WYRQV 189
E+ + + PG V+++L+GR+ G++ +++K G T A+ +C LRR R V
Sbjct: 86 EHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYV 145
Query: 190 PPESAQED-GKE*NPQEVQDKAFRQ 261
S++ D G P+ + D FR+
Sbjct: 146 IGTSSKVDLGAFKVPEHLNDAYFRR 170
>AE014297-2140|AAF55268.1| 247|Drosophila melanogaster CG5013-PA
protein.
Length = 247
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 73 VLVLSGRYAGRKAIVVKNYDEGTSEQAVRACLRRWYRQVPPESAQEDGKE 222
V L R AG K I Y E +++ ++ A L++W Q P S ++ GKE
Sbjct: 169 VAFLLERNAGAKFIFT--YQERSADWSIEALLKKWKLQALPISMEDIGKE 216
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -3
Query: 234 LWILFFPILLCTFR---GYLSIPATKACPYGLFGGTFVVILDYDSLATRV 94
LW FF R G + +P T+ CP G G F+ + D L R+
Sbjct: 605 LWQSFFSGRRAVIRSSSGTVEVPVTRGCPQGSISGPFIWDILMDVLLQRL 654
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,496,714
Number of Sequences: 53049
Number of extensions: 439086
Number of successful extensions: 1244
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -