Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_K21
         (443 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   157   4e-39
U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical...    27   8.1  
AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical...    27   8.1  
AL034393-8|CAA22313.1|  241|Caenorhabditis elegans Hypothetical ...    27   8.1  
AF098506-1|ABN43085.1|  145|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  157 bits (380), Expect = 4e-39
 Identities = 73/135 (54%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
 Frame = +2

Query: 41  KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 220
           K++K+ G      E  +SQAL++LETN D+++QL+ELYI   KE+EL NK +IIIYVP+P
Sbjct: 7   KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66

Query: 221 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKXPRSRTLTSVY 397
           +LKAF KI   LVRELEKKF G+ ++ +  R+ILPKP   ++    KQK PRSRTLT+V+
Sbjct: 67  QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126

Query: 398 DAILEDLVFPADIXG 442
           DA L++LV+PA++ G
Sbjct: 127 DAWLDELVYPAEVVG 141


>U23486-3|AAL38955.1|  529|Caenorhabditis elegans Hypothetical
           protein F07F6.4 protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 105 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 215
           S+SK T      F SF  Q ++K  YT  S SSS  R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 127 VGVGFEFDQRLRDRGLEGIRLSTACFDDL 41
           V VGFE   RLRD+GL   +LS   +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550


>U23179-7|AAC46721.1|  782|Caenorhabditis elegans Hypothetical
           protein C27D6.1 protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 20  KLSXMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSI 199
           K +  + K I+A   +     T  S+ L ELE       Q +E +  K++E+E+ NK+ +
Sbjct: 243 KANEKARKEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQLV 302


>AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10b protein.
          Length = 316

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +2

Query: 170 EIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
           E E H K   ++   +  +K   +   +L+ E+E++F  + +        LP PS  T
Sbjct: 255 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 312


>AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10a protein.
          Length = 317

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +2

Query: 170 EIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKT 343
           E E H K   ++   +  +K   +   +L+ E+E++F  + +        LP PS  T
Sbjct: 256 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 313


>AL034393-8|CAA22313.1|  241|Caenorhabditis elegans Hypothetical
           protein Y18D10A.10 protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 339 LWLGLGRILRSPTKTTCLPLNFF 271
           +W+G  R  R P K +C PL+ F
Sbjct: 143 VWVGAYRKARCPNKPSCTPLDTF 165


>AF098506-1|ABN43085.1|  145|Caenorhabditis elegans Hypothetical
           protein H29C22.1 protein.
          Length = 145

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 92  SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 211
           S+A ++LE N D+     E +  K  + E +NK+  + Y+
Sbjct: 33  SRAAIKLENNDDVPELFHENFEFKTCKEERYNKEQTVDYI 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,968,251
Number of Sequences: 27780
Number of extensions: 171604
Number of successful extensions: 501
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)