Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_K19
(415 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835... 185 1e-47
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416... 185 1e-47
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406... 181 2e-46
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215... 180 5e-46
01_06_0986 - 33602714-33602741,33603037-33603146,33603401-336036... 27 4.5
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 27 4.5
08_01_0455 + 4012857-4013735 27 5.9
05_01_0429 + 3399266-3399708,3401320-3401382,3403919-3404345,340... 27 5.9
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426... 27 5.9
04_01_0477 - 6221990-6223224,6227722-6228817 27 7.8
>07_03_0445 -
18281715-18281832,18282274-18282505,18283486-18283534,
18283733-18283783
Length = 149
Score = 185 bits (450), Expect = 1e-47
Identities = 81/129 (62%), Positives = 103/129 (79%)
Frame = +1
Query: 28 ERTFIMVKPDGVQRGLVGTIIERLEKKGFKLVGLKFVWPSEXLLQQHYSDLASRPFFPGL 207
E++FIM+KPDGVQRGL+G II R EKKGF L G+KF+ QQHY+DL+ +PFFPGL
Sbjct: 2 EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61
Query: 208 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 387
V+Y+ SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D ++VGRN+IHGSDSV+
Sbjct: 62 VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121
Query: 388 SXKNEIGLW 414
+ K EI LW
Sbjct: 122 NGKKEIALW 130
>05_07_0347 -
29440541-29440664,29440908-29441020,29441522-29441689,
29442341-29442391,29442518-29442555,29442885-29442978
Length = 195
Score = 185 bits (450), Expect = 1e-47
Identities = 83/133 (62%), Positives = 102/133 (76%)
Frame = +1
Query: 16 AEQRERTFIMVKPDGVQRGLVGTIIERLEKKGFKLVGLKFVWPSEXLLQQHYSDLASRPF 195
A + ERTFI +KPDGVQRGL+ I+ R E+KGFKLV +K V PS+ Q+HY DL RPF
Sbjct: 42 AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101
Query: 196 FPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGS 375
F GL ++SSGPV+ MVWEG V+K GR+++GAT+P S+PGTIRGDL + VGRNIIHGS
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161
Query: 376 DSVESXKNEIGLW 414
D E+ K EIGLW
Sbjct: 162 DGPETAKAEIGLW 174
>10_08_0945 -
21738643-21738760,21740056-21740287,21740582-21740630,
21740720-21740776
Length = 151
Score = 181 bits (440), Expect = 2e-46
Identities = 78/129 (60%), Positives = 102/129 (79%)
Frame = +1
Query: 28 ERTFIMVKPDGVQRGLVGTIIERLEKKGFKLVGLKFVWPSEXLLQQHYSDLASRPFFPGL 207
E+TFIM+KPDGVQRGL+G +I R EKKGF L +K + + ++HY+DL+S+PFF GL
Sbjct: 4 EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63
Query: 208 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 387
V+Y+ SGPVV MVWEG VV TGR+++GATNP ++PGTIRGD + +GRN+IHGSDSVE
Sbjct: 64 VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123
Query: 388 SXKNEIGLW 414
+ + EI LW
Sbjct: 124 NARKEIALW 132
>12_02_0695 +
22220054-22220056,22221226-22221276,22221415-22221501,
22222064-22222144,22222241-22222353,22222482-22222531,
22222790-22222857
Length = 150
Score = 180 bits (437), Expect = 5e-46
Identities = 78/129 (60%), Positives = 100/129 (77%)
Frame = +1
Query: 28 ERTFIMVKPDGVQRGLVGTIIERLEKKGFKLVGLKFVWPSEXLLQQHYSDLASRPFFPGL 207
E+++IM+KPDGVQRGLVG II R EKKGF L GLK + L Q+HY DL +PFFPGL
Sbjct: 3 EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62
Query: 208 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPXDSQPGTIRGDLCIQVGRNIIHGSDSVE 387
++Y++SGPVV M WEG VV + R+++GATNP ++PGTIRGDL +Q GRN++HGSDS +
Sbjct: 63 IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122
Query: 388 SXKNEIGLW 414
+ K EI LW
Sbjct: 123 NGKREIALW 131
>01_06_0986 -
33602714-33602741,33603037-33603146,33603401-33603601,
33604605-33604697,33604937-33605182,33606007-33606372,
33606459-33606599,33607170-33607526
Length = 513
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 181 ASRPFFPGLVKYMSSGPVVP 240
ASRPF PGL++ PV+P
Sbjct: 22 ASRPFLPGLLEAALRAPVLP 41
>01_03_0131 -
12858377-12858664,12859585-12859975,12863357-12863397,
12864745-12865419
Length = 464
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 102 FETFNNGAHKTTLYTIRLNHNKSTL 28
+ F +K T+YT+RL+HN+ L
Sbjct: 421 YRAFTWAEYKRTMYTLRLSHNRLDL 445
>08_01_0455 + 4012857-4013735
Length = 292
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 100 RDVQ*WCPQDHVVHHQA 50
R V WCPQD V+ H+A
Sbjct: 166 RCVATWCPQDRVLRHRA 182
>05_01_0429 +
3399266-3399708,3401320-3401382,3403919-3404345,
3404863-3405141
Length = 403
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 102 FETFNNGAHKTTLYTIRLNHNKSTLTLFR 16
+ +F +KTT+Y++RL+H S L LF+
Sbjct: 363 YRSFTWAEYKTTMYSLRLSH--SRLELFK 389
>01_06_0319 -
28441082-28441102,28441630-28441701,28442568-28442627,
28442918-28443105,28444300-28444327,28444880-28444907,
28444942-28445163,28445238-28445409,28446224-28447468,
28447573-28447741,28447820-28448045,28449096-28449451,
28449530-28449724,28450655-28450864,28451729-28452004
Length = 1155
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 278 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL 171
RP S+T + P+ +RPGK+G DA+S+
Sbjct: 529 RPFCPCASRSNTDASLHPQTENGSRPGKRGNDAESV 564
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 26.6 bits (56), Expect = 7.8
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 79 GTIIERLEKKGFKLVGLKFVWP-SEXLLQQHYSDLASRPFFPGLVKYMSSG---PVVPMV 246
G ++ RLE K K V P S L +H++ LA+ GL +SSG P V +V
Sbjct: 356 GKLLARLEHDERKSQRPKRVSPPSARLWPRHFTPLAAAAAATGLPPPLSSGVALPEVLVV 415
Query: 247 WE 252
W+
Sbjct: 416 WD 417
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,858,519
Number of Sequences: 37544
Number of extensions: 202905
Number of successful extensions: 501
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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