Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_K15
         (529 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132     32   0.33 
12_02_1069 + 25801309-25801433,25802429-25802620,25803130-258031...    29   3.1  
06_03_0505 + 21545547-21545813,21546075-21546167,21546535-215467...    29   3.1  
09_04_0003 - 13577369-13578082,13579045-13579092                       28   4.0  
12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831     27   7.1  

>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
          Length = 5436

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 15/53 (28%), Positives = 33/53 (62%)
 Frame = +1

Query: 199  STDRSVKGSSKNLKPSTWVPGQGVAAKIDAETKVKIEEMNKMVQTQKEAVIKD 357
            S+ R+V+  + +L+  T+  G+  AAK++ + +   +E +KMV  + E+ +K+
Sbjct: 3054 SSPRNVEVEAVDLRDETFYIGETKAAKLEEKNETNTKEDDKMVLVEVESPVKN 3106



 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 199  STDRSVKGSSKNLKPSTWVPGQGVAAKIDAETKVKIEEMNKMVQTQKEAVI 351
            ST   V+    +L+  T   G+   AK++ E +   EE+NKMV  + E+ +
Sbjct: 2083 STPTDVEDEEVDLQDETSYIGEFKDAKLEDEKETISEEINKMVAVEVESSV 2133



 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +1

Query: 199  STDRSVKGSSKNLKPSTWVPGQGVAAKIDAETKVKIEEMNKMVQTQKEAVIK 354
            ST   V+  + NL+  T+   +  AAK+D E K   E ++ ++  + +  +K
Sbjct: 4648 STSSDVEVEAVNLRDDTFHIRESTAAKLDDENKTNTENISVVMPNKLQKDVK 4699


>12_02_1069 +
           25801309-25801433,25802429-25802620,25803130-25803159,
           25803426-25803500,25803599-25804373,25804549-25804614,
           25804746-25804811,25804898-25805140,25805407-25805502
          Length = 555

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 207 VCTFQLHLEPPPWPALGVLLFASL 136
           V  FQ  + PPPWPA G   F  +
Sbjct: 231 VAAFQSRMMPPPWPARGKAEFGDV 254


>06_03_0505 +
           21545547-21545813,21546075-21546167,21546535-21546747,
           21548933-21549124,21549217-21550197
          Length = 581

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -2

Query: 273 RNTLPWYPCAWLQIL*TAFHAPVCTFQLHLEPPPWPALGVLLFASLPR 130
           RNT   +P  W  I   A +  V  F  H+EP     +GV+   ++ R
Sbjct: 508 RNTAVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVIFAEAVDR 555


>09_04_0003 - 13577369-13578082,13579045-13579092
          Length = 253

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -3

Query: 392 SSGLMSYTRFKTSLMTASFCVWTILFISSILTLVSASILAATPCPG 255
           S G M Y R   +L  AS   + +   S  L+  SAS  AA  CPG
Sbjct: 60  SPGGMLYVRQWNNLQYASSAAFLLTAYSHYLSSSSASASAALRCPG 105


>12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831
          Length = 418

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 68  ESDPRNPTASSC*KTRCG-ESQRGKEAKSKTPK 163
           E    +PT SSC   +CG    + K+ K+KT K
Sbjct: 9   EETMASPTTSSCGTCKCGANDDKAKKMKTKTKK 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,514,951
Number of Sequences: 37544
Number of extensions: 207698
Number of successful extensions: 590
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)