Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_K15
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88173-4|AAK21386.1| 126|Caenorhabditis elegans Vacuolar h atpa... 45 4e-05
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 30 1.2
Z68301-4|CAA92623.2| 536|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical pr... 28 4.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 4.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 4.8
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 28 4.8
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 27 6.3
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 27 6.3
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 27 6.3
Z93379-4|CAB07588.1| 306|Caenorhabditis elegans Hypothetical pr... 27 8.3
>U88173-4|AAK21386.1| 126|Caenorhabditis elegans Vacuolar h atpase
protein 10 protein.
Length = 126
Score = 44.8 bits (101), Expect = 4e-05
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 63 MASQTQGIQQLLAAEKRAAEKVS 131
MASQTQGIQQLLAAEKRAAEK++
Sbjct: 1 MASQTQGIQQLLAAEKRAAEKIN 23
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 262 QGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINYRL 411
+ + +KI +T+ +I M + V K+AVI +L LV DIKPELH N L
Sbjct: 67 EDIESKIRRDTEDQISGMKQSVAGNKQAVIVRLLQLVCDIKPELHHNLTL 116
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/92 (21%), Positives = 47/92 (51%)
Frame = +1
Query: 73 RPKESNSF*LLKNALRRKSARQGSEKQNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPSTW 252
+ K + F + LRR++ + ++K++ + + KM + + ++ + LK S+
Sbjct: 152 KAKLTEHFKEAETQLRRENVKLEAQKEDILNHTKNSEKMWNERLE-NITADFERLKSSSK 210
Query: 253 VPGQGVAAKIDAETKVKIEEMNKMVQTQKEAV 348
G K+ E ++KI+E+N+ ++ EA+
Sbjct: 211 PSGIRADQKMFQENEMKIQELNRKLKDALEAI 242
>Z68301-4|CAA92623.2| 536|Caenorhabditis elegans Hypothetical
protein W01B6.5 protein.
Length = 536
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/66 (25%), Positives = 38/66 (57%)
Frame = +1
Query: 184 KMKLKSTDRSVKGSSKNLKPSTWVPGQGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVL 363
KMKLKST ++V+ + K L+ + V + V + +++ + ++++ AV+K+ L
Sbjct: 286 KMKLKSTKKTVEVAVKMLRNAEVVIREQVGELLHEARVMRMMDHKNVLRSYGIAVLKEPL 345
Query: 364 NLVYDI 381
L+ ++
Sbjct: 346 YLMTEM 351
>Z46787-8|CAA86746.1| 253|Caenorhabditis elegans Hypothetical
protein C16C10.8 protein.
Length = 253
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 169 PRRRLKMKLKSTDRSVKGSSKNLKPSTWVPGQGVAAKIDAETKVKIEEMNKMVQTQKEA 345
PR+ K + S + KNL W A K+ E K EE KM + QKEA
Sbjct: 106 PRKEAKF-INFLTNSCRLRDKNLALRAWQAIAAEADKMREEAIRKQEETQKMEKAQKEA 163
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 184 KMKLKSTDRSVKGSSKNLKPSTWVPGQGVA--AKIDAETKVKIEEMNKMVQTQKEAVIKD 357
K KL++ +S G K + S Q V AK+DA+TK K E ++ +++ +
Sbjct: 13347 KNKLEANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQTKLEKDEKSTKES 13406
Query: 358 VLNLVYDIKPE 390
D KP+
Sbjct: 13407 ESKETVDEKPK 13417
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 4.8
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 184 KMKLKSTDRSVKGSSKNLKPSTWVPGQGVA--AKIDAETKVKIEEMNKMVQTQKEAVIKD 357
K KL++ +S G K + S Q V AK+DA+TK K E ++ +++ +
Sbjct: 13347 KNKLEANKKSAAGKLKIEEESAAKSKQTVEEQAKLDAQTKAKTAEKQTKLEKDEKSTKES 13406
Query: 358 VLNLVYDIKPE 390
D KP+
Sbjct: 13407 ESKETVDEKPK 13417
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 27.9 bits (59), Expect = 4.8
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Frame = +1
Query: 106 KNALRR--KSARQGSEKQNA*SRPRRRLKMKLKSTDRSVKGSSKNL--KPSTWVPGQGVA 273
K+ LRR + R S + S K +++ T+ + + K L K + VPG +A
Sbjct: 676 KSPLRRDERRRRHDSLENERRSSATASEKSRMQETEYNGEDEEKGLDDKELSTVPGSSMA 735
Query: 274 AKIDAETKVKIEEMNKMVQTQ---KEAVIK----DVLNLVYDIKPE 390
++T +++ K+++TQ K+ +K ++L + Y++K E
Sbjct: 736 KMDKSDTCFQLDHSEKLLETQEPKKKEKLKEKERELLAVSYEVKKE 781
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/97 (22%), Positives = 39/97 (40%)
Frame = +1
Query: 100 LLKNALRRKSARQGSEKQNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPSTWVPGQGVAAK 279
L + A +K Q EKQ + R ++KL G S +K + GQG + +
Sbjct: 5 LSEEAREQKRINQEIEKQLQRDKRNARRELKLLLLGTGESGKSTFIKQMRIIHGQGYSEE 64
Query: 280 IDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPE 390
D +++ N + Q D L++ + + E
Sbjct: 65 -DKRAHIRLVYQNVFMAIQSMIRAMDTLDIKFGNESE 100
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/97 (22%), Positives = 39/97 (40%)
Frame = +1
Query: 100 LLKNALRRKSARQGSEKQNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPSTWVPGQGVAAK 279
L + A +K Q EKQ + R ++KL G S +K + GQG + +
Sbjct: 5 LSEEAREQKRINQEIEKQLQRDKRNARRELKLLLLGTGESGKSTFIKQMRIIHGQGYSEE 64
Query: 280 IDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPE 390
D +++ N + Q D L++ + + E
Sbjct: 65 -DKRAHIRLVYQNVFMAIQSMIRAMDTLDIKFGNESE 100
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/97 (22%), Positives = 39/97 (40%)
Frame = +1
Query: 100 LLKNALRRKSARQGSEKQNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPSTWVPGQGVAAK 279
L + A +K Q EKQ + R ++KL G S +K + GQG + +
Sbjct: 5 LSEEAREQKRINQEIEKQLQRDKRNARRELKLLLLGTGESGKSTFIKQMRIIHGQGYSEE 64
Query: 280 IDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPE 390
D +++ N + Q D L++ + + E
Sbjct: 65 -DKRAHIRLVYQNVFMAIQSMIRAMDTLDIKFGNESE 100
>Z93379-4|CAB07588.1| 306|Caenorhabditis elegans Hypothetical
protein F21H7.5 protein.
Length = 306
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 59 RYGESDPRNPTASSC*KTRCGESQRGKEAKSKTPKAGQGG 178
R G+S T S + G+S RGK +KSK P + G
Sbjct: 57 RSGKSGKSGKTGKS---GKSGKSSRGKSSKSKKPSKSKAG 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,763,445
Number of Sequences: 27780
Number of extensions: 166150
Number of successful extensions: 519
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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