Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_K13
(355 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0691 - 26315738-26315848,26315939-26316163,26316249-263166... 61 2e-10
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 58 2e-09
04_04_0308 + 24286923-24286927,24288430-24288907,24288980-242890... 52 1e-07
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490... 48 3e-06
02_01_0091 + 646299-649082 39 0.001
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 36 0.012
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 32 0.11
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 32 0.15
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 31 0.26
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 30 0.45
03_02_0189 - 6253659-6255380 29 0.79
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 29 0.79
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 29 0.79
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 29 0.79
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 29 1.1
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388... 29 1.1
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 29 1.4
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 29 1.4
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 29 1.4
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 28 2.4
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 28 2.4
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 27 3.2
08_01_0397 - 3509186-3510291,3510322-3512335 27 3.2
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 27 5.6
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 26 7.4
06_01_0733 + 5405889-5405922,5405923-5405975,5406430-5406543,540... 26 7.4
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 26 9.8
04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061 26 9.8
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 26 9.8
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 26 9.8
>11_06_0691 -
26315738-26315848,26315939-26316163,26316249-26316602,
26316681-26316795,26316882-26316925,26317026-26317122,
26317243-26317406,26317499-26317726,26317903-26318222,
26320028-26320136
Length = 588
Score = 61.3 bits (142), Expect = 2e-10
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +2
Query: 56 MDHITDKLMQYFGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNK 235
+D I + FG++ + LQ +A RA + D +V MPTG GKSLC+QLPA L
Sbjct: 171 LDDINFANVVIFGNKSFRP-LQYEACRAAVSNM-DTFVLMPTGGGKSLCYQLPATLHPG- 227
Query: 236 LAIVFSPLLALIKDQIDHXT-KLKITAESINSKMS 337
+ +V PLL+LI+DQI K I A +NS+ +
Sbjct: 228 VTVVVCPLLSLIEDQIVALNFKFAIPAAFLNSQQT 262
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 58.0 bits (134), Expect = 2e-09
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = +2
Query: 125 QAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNKLAIVFSPLLALIKDQIDHXTKLK 304
Q I AI G DV V M G GKSLC+QLPA+L D + +V SPLL+LI+DQ+ L
Sbjct: 112 QIINAIMSG-RDVLVIMAAGGGKSLCYQLPAVLHDG-ITLVVSPLLSLIQDQVMGLAALG 169
Query: 305 ITAESINS 328
I A + S
Sbjct: 170 IQAYMLAS 177
>04_04_0308 +
24286923-24286927,24288430-24288907,24288980-24289099,
24289182-24289235,24289467-24289579,24289799-24290011,
24290123-24290201,24290323-24290376,24290448-24290522,
24291029-24291193,24291843-24291941,24292186-24292241,
24292331-24292433,24293289-24293417,24293657-24293835,
24293953-24293977,24294060-24294175,24294252-24294342
Length = 717
Score = 52.4 bits (120), Expect = 1e-07
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +2
Query: 89 FGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNKLAIVFSPLLAL 268
+GH + Q +AI+ I G + V +PTG+GKSLC+Q+PAM+ L +V SPLL+L
Sbjct: 124 YGHDSFRQG-QLEAIQQIVAGESTMLV-LPTGAGKSLCYQVPAMILPG-LTLVVSPLLSL 180
Query: 269 IKDQI 283
+ DQ+
Sbjct: 181 MVDQL 185
>07_03_1705 +
28848293-28848321,28848766-28848841,28848940-28849082,
28849297-28849383,28849492-28849575,28850224-28850380,
28850521-28850606,28850995-28851226,28851351-28851471,
28851610-28851746,28852086-28852202,28852612-28852660,
28852751-28852793,28852945-28853116,28853192-28853262,
28853365-28853458,28853608-28853820,28853851-28853859,
28853895-28853999,28854266-28854586,28854664-28854789
Length = 823
Score = 47.6 bits (108), Expect = 3e-06
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 173 MPTGSGKSLCFQLPAMLQDNKLAIVFSPLLALIKDQIDHXTKLKITAESINS 328
M TGSGKS+C+Q+P ++ K A+V SPLL+L++DQ+ + + +E + S
Sbjct: 1 MATGSGKSICYQIPPLV-TKKTAVVVSPLLSLMQDQVMSLKQHGVKSEYLGS 51
>02_01_0091 + 646299-649082
Length = 927
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 119 QEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNK----LAIVFSPLLALIKDQID 286
Q QA+++ G H V VS T SGKSLC+ +P + ++ A+ P AL +DQ+
Sbjct: 192 QAQAVQSAVSGEH-VVVSTSTSSGKSLCYNIPVLESISQSSAPCALYIFPTKALAQDQLK 250
Query: 287 HXTKLK 304
++K
Sbjct: 251 TLLEMK 256
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 35.5 bits (78), Expect = 0.012
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +2
Query: 89 FGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQ 208
FG+R + Q + I A G +DV+V MPTG GKSL +Q
Sbjct: 1797 FGNRSFRPN-QREIINATMSG-NDVFVLMPTGGGKSLTYQ 1834
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 32.3 bits (70), Expect = 0.11
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Frame = +2
Query: 116 LQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAML-----QDNKLAIVFSPLLALIKDQ 280
+Q QA + ++V + PTGSGK++ +L AML Q + + +PL A+++++
Sbjct: 1285 IQTQAFHVLYHSDNNVLLGAPTGSGKTISAEL-AMLHLFNTQPDMKVVYIAPLKAIVRER 1343
Query: 281 IDHXTKLKIT 310
++ + +T
Sbjct: 1344 MNDWRQRLVT 1353
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 110 SELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+E+Q ++I + G DV S TGSGK+L F +PA+
Sbjct: 110 TEIQARSIPPLMLG-SDVMASAKTGSGKTLAFLIPAI 145
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 31.1 bits (67), Expect = 0.26
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 116 LQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQ 226
+Q QAI + G + + PTGSGK+L F P +++
Sbjct: 172 IQRQAIPILLSG-RECFACAPTGSGKTLAFLFPILMK 207
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 30.3 bits (65), Expect = 0.45
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 101 KXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNKLAI 244
K + +Q Q A V V+ PTGSGK++C + A+L++++ A+
Sbjct: 1329 KHFNPIQTQVFTASYNSDDSVLVAAPTGSGKTICAEF-AILRNHQKAV 1375
>03_02_0189 - 6253659-6255380
Length = 573
Score = 29.5 bits (63), Expect = 0.79
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 110 SELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+E+Q AI I+ HD + TGSGK+L + LP +
Sbjct: 155 TEVQSAAIPIISQK-HDAVIQSYTGSGKTLAYLLPIL 190
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 29.5 bits (63), Expect = 0.79
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 110 SELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+E+Q AI I+ HD + TGSGK+L + LP +
Sbjct: 617 TEVQSAAIPIISQK-HDAVIQSYTGSGKTLAYLLPIL 652
>02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 29.5 bits (63), Expect = 0.79
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 101 KXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNKLAI 244
K + +Q Q + V V+ PTGSGK++C + A+L++++ A+
Sbjct: 1360 KHFNPIQTQVFTVLYNTDDSVLVAAPTGSGKTICAEF-AILRNHQKAV 1406
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 29.5 bits (63), Expect = 0.79
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 74 KLMQYFGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
K ++ G+ K +++QE + I G DV TG+GK++ F LPA+
Sbjct: 87 KAIKDAGYEKM-TQVQEATLPIILQG-EDVLAKAKTGTGKTVAFLLPAI 133
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 110 SELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAML 223
SE+Q A+ G DV + TGSGK+L F +P ++
Sbjct: 104 SEIQRAALPHALCG-RDVLGAAKTGSGKTLAFVIPVLM 140
>02_04_0624 +
24538095-24538183,24538429-24538612,24538725-24538886,
24538988-24539225,24539301-24539370,24539439-24539530,
24539799-24539836,24540018-24540039,24540462-24540618,
24540702-24540753,24542144-24542207,24542279-24542362,
24543418-24543543,24543622-24543818,24543903-24544091,
24544186-24544434,24544507-24544556,24544977-24545059,
24545164-24545449,24545751-24545794,24545878-24546626
Length = 1074
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 89 FGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQL 211
FG R S LQ + A ++ +S PTGSGK++ F+L
Sbjct: 27 FGFRYFNS-LQSECFPACFLSDVNMVISAPTGSGKTVLFEL 66
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 116 LQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+QE A+ G DV V TG+GKS F LPA+
Sbjct: 368 VQETALPMCLEG-KDVLVKAKTGTGKSAAFLLPAI 401
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 158 DVYVSMPTGSGKSLCFQLP 214
D+ ++ PTGSGK+L + LP
Sbjct: 76 DICINSPTGSGKTLAYALP 94
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 110 SELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+++QE + I G DV TG+GK++ F LPA+
Sbjct: 30 TQVQEATLPVILQG-KDVLAKAKTGTGKTVAFLLPAI 65
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 110 SELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+++Q ++I + G DV + TGSGK+L F +PA+
Sbjct: 120 TQIQARSIPHLLNG-KDVMGAAKTGSGKTLAFLIPAI 155
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 116 LQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNKLA 241
+Q +AI I G DV TGSGK+ + LP + + KL+
Sbjct: 109 IQREAIPLILEG-KDVVAKAKTGSGKTFAYLLPMLHELLKLS 149
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +2
Query: 80 MQYFGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQ 226
+++ G+R + +Q +A+ I G HD+ TGSGK+ F +P M+Q
Sbjct: 41 VRHKGYR-VPTPIQRKAMPLILAG-HDIAAMARTGSGKTAAFLVP-MIQ 86
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 27.5 bits (58), Expect = 3.2
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 65 ITDKLM---QYFGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+T KL+ + G K S +Q QA+ I G D TGSGK+L F LP +
Sbjct: 431 LTSKLLDTIKKLGFEKPMS-IQAQALPIIMSG-RDCIGIAKTGSGKTLAFVLPML 483
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 26.6 bits (56), Expect = 5.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 101 KXKSELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
K + +Q+ A DV + TGSGK+L F LP +
Sbjct: 163 KEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPIL 202
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 26.2 bits (55), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 116 LQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAM 220
+Q QA+ I G D TGSGK+L F LP +
Sbjct: 311 IQAQALPIIMSG-RDCIGIAKTGSGKTLAFVLPML 344
>06_01_0733 +
5405889-5405922,5405923-5405975,5406430-5406543,
5407464-5407523,5408139-5408217,5410661-5410728,
5411198-5411302,5411887-5411994,5412087-5412279,
5412818-5412897,5413309-5413536,5414112-5414252,
5414341-5414466,5414561-5414611,5414879-5414956,
5415814-5415960,5416685-5417179
Length = 719
Score = 26.2 bits (55), Expect = 7.4
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +2
Query: 110 SELQEQAIRAITXGVHDVYVSMPTGSGKSLCFQLPAMLQDNKLAIVFSPLLALIKDQIDH 289
SE QE + T H+ + TGS LP+ + D L + +K ++
Sbjct: 508 SECQEFLLSERTTFQHNTGIVQETGSQAHKGKPLPSDVSDEFLKKASQAEIDELKQRVSE 567
Query: 290 XTKLKITAESINSKM 334
T+ K +S N K+
Sbjct: 568 LTEAKSQLDSCNHKL 582
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 158 DVYVSMPTGSGKSLCFQLPAMLQDNKL 238
DV TG+GK++ F LPA+ +KL
Sbjct: 494 DVLAKAKTGTGKTVAFLLPAIEVVSKL 520
>04_04_0084 - 22618729-22619010,22619103-22619732,22619933-22620061
Length = 346
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -2
Query: 264 ARSGEKTIASLLSCNIAGSWKHNDFPDPVGMD 169
A GE+ + + +C++ W+H+ PD + D
Sbjct: 83 ASCGEQLVVNGTNCDLGDYWQHSPTPDFLDSD 114
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 68 TDKLMQYFGHRKXKSELQEQAIRAITXGVHDVYVSMPTGSGKSL 199
TD ++ F + K +L QA+ ++ D+Y ++ G+G+S+
Sbjct: 100 TDNEVKNFWNSTIKKKLISQAVGSLHPSSADLYYNILDGAGQSI 143
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 158 DVYVSMPTGSGKSLCFQLPAM 220
DV V TGSGK+L F +P +
Sbjct: 62 DVAVDAATGSGKTLAFVVPVV 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,745,311
Number of Sequences: 37544
Number of extensions: 121709
Number of successful extensions: 300
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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