Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_K10
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    31   0.85 
U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.       31   0.85 
U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.       31   0.85 
Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 64  WILDIEVEECEEFSYRGNAGT 126
           W  D +VEEC+EF Y G  GT
Sbjct: 52  WFWDKQVEECKEFHYGGCMGT 72


>U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 64  WILDIEVEECEEFSYRGNAGT 126
           W  D +VEEC+EF Y G  GT
Sbjct: 52  WFWDKQVEECKEFHYGGCMGT 72


>U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 64  WILDIEVEECEEFSYRGNAGT 126
           W  D +VEEC+EF Y G  GT
Sbjct: 52  WFWDKQVEECKEFHYGGCMGT 72


>Z74043-5|CAA98544.1|  588|Caenorhabditis elegans Hypothetical
           protein T19B10.9 protein.
          Length = 588

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 257 VLMIQLRTLKTY*KLCHWRHLTWMTIKN*K-TST 355
           + +I   TLK Y +   WR   W+ I N K TST
Sbjct: 553 MFLIPKGTLKVYIRAIQWRRFKWLAIDNLKVTST 586


>Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical
           protein C08B6.2 protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 469 SRLDTPPLSEDETPTFDRIVELNNSEIILKLINLSDSEYE 588
           +RLD P     + P  D I   N +EI+    N+ D+E E
Sbjct: 293 TRLDQPISRSVDQPPIDTIPNNNENEILPDTSNVQDNEIE 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,418,836
Number of Sequences: 27780
Number of extensions: 238977
Number of successful extensions: 632
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)