Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_K06
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005829-1|AAH05829.1|  172|Homo sapiens NADH dehydrogenase (ubi...   106   4e-23
AF088995-1|AAD16091.1|  172|Homo sapiens NADH-ubiquinone oxidore...   106   4e-23
AF088991-1|AAD08677.1|  172|Homo sapiens NADH-ubiquinone oxidore...   106   4e-23
AF044954-1|AAD05419.1|  172|Homo sapiens NADH:ubiquinone oxidore...   106   4e-23
BC007509-1|AAH07509.1|  168|Homo sapiens NDUFB10 protein protein.      81   2e-15
BC032382-1|AAH32382.1|  237|Homo sapiens LOC440456 protein protein.    29   7.4  

>BC005829-1|AAH05829.1|  172|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 10, 22kDa protein.
          Length = 172

 Score =  106 bits (255), Expect = 4e-23
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  VDAPVTWFRETVVEPNQK-KYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDS 273
           VD PVT  RE +   + K +Y +YH+ YRRVP I +C ++D++C +EA  Q+KRD  VD 
Sbjct: 35  VDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWKRDYKVDQ 94

Query: 274 EILSILRQRYEDCMMYEXPDHATKCRSLWDKYKSAEEAWFIXYGDLGAYGDARKAYMXQK 453
           EI++I++ R + C   E  ++   C    +++    +A+   Y DLGAY  ARK    Q+
Sbjct: 95  EIINIMQDRLKACQQREGQNYQQNCIKEVEQFTQVAKAYQDRYQDLGAYSSARKCLAKQR 154

Query: 454 HRMVWERR 477
            RM+ ER+
Sbjct: 155 QRMLQERK 162


>AF088995-1|AAD16091.1|  172|Homo sapiens NADH-ubiquinone
           oxidoreductase PDSW subunit protein.
          Length = 172

 Score =  106 bits (255), Expect = 4e-23
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  VDAPVTWFRETVVEPNQK-KYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDS 273
           VD PVT  RE +   + K +Y +YH+ YRRVP I +C ++D++C +EA  Q+KRD  VD 
Sbjct: 35  VDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWKRDYKVDQ 94

Query: 274 EILSILRQRYEDCMMYEXPDHATKCRSLWDKYKSAEEAWFIXYGDLGAYGDARKAYMXQK 453
           EI++I++ R + C   E  ++   C    +++    +A+   Y DLGAY  ARK    Q+
Sbjct: 95  EIINIMQDRLKACQQREGQNYQQNCIKEVEQFTQVAKAYQDRYQDLGAYSSARKCLAKQR 154

Query: 454 HRMVWERR 477
            RM+ ER+
Sbjct: 155 QRMLQERK 162


>AF088991-1|AAD08677.1|  172|Homo sapiens NADH-ubiquinone
           oxidoreductase PDSW subunit protein.
          Length = 172

 Score =  106 bits (255), Expect = 4e-23
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  VDAPVTWFRETVVEPNQK-KYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDS 273
           VD PVT  RE +   + K +Y +YH+ YRRVP I +C ++D++C +EA  Q+KRD  VD 
Sbjct: 35  VDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWKRDYKVDQ 94

Query: 274 EILSILRQRYEDCMMYEXPDHATKCRSLWDKYKSAEEAWFIXYGDLGAYGDARKAYMXQK 453
           EI++I++ R + C   E  ++   C    +++    +A+   Y DLGAY  ARK    Q+
Sbjct: 95  EIINIMQDRLKACQQREGQNYQQNCIKEVEQFTQVAKAYQDRYQDLGAYSSARKCLAKQR 154

Query: 454 HRMVWERR 477
            RM+ ER+
Sbjct: 155 QRMLQERK 162


>AF044954-1|AAD05419.1|  172|Homo sapiens NADH:ubiquinone
           oxidoreductase PDSW subunit protein.
          Length = 172

 Score =  106 bits (255), Expect = 4e-23
 Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  VDAPVTWFRETVVEPNQK-KYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDS 273
           VD PVT  RE +   + K +Y +YH+ YRRVP I +C ++D++C +EA  Q+KRD  VD 
Sbjct: 35  VDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWKRDYKVDQ 94

Query: 274 EILSILRQRYEDCMMYEXPDHATKCRSLWDKYKSAEEAWFIXYGDLGAYGDARKAYMXQK 453
           EI++I++ R + C   E  ++   C    +++    +A+   Y DLGAY  ARK    Q+
Sbjct: 95  EIINIMQDRLKACQQREGQNYQQNCIKEVEQFTQVAKAYQDRYQDLGAYSSARKCLAKQR 154

Query: 454 HRMVWERR 477
            RM+ ER+
Sbjct: 155 QRMLQERK 162


>BC007509-1|AAH07509.1|  168|Homo sapiens NDUFB10 protein protein.
          Length = 168

 Score = 81.0 bits (191), Expect = 2e-15
 Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = +1

Query: 97  VDAPVTWFRETVVEPNQK-KYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDS 273
           VD PVT  RE +   + K +Y +YH+ YRRVP I +C ++D++C +EA  Q+KRD  VD 
Sbjct: 35  VDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWKRDYKVDQ 94

Query: 274 EILSILRQRYEDCMMYEXPDHATKCRSLWDKYKSAEEAW 390
           EI++I++ R + C   E  ++   C    +++    +A+
Sbjct: 95  EIINIMQDRLKACQQREGQNYQQNCIKEVEQFTQVAKAY 133


>BC032382-1|AAH32382.1|  237|Homo sapiens LOC440456 protein protein.
          Length = 237

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -3

Query: 420 ISTEVTIXNEPSFLSRLVLVPKRPAFSCMVWXLIHHAIFIALPENA*YLRVHCPVSFK 247
           +S  V +   P   SR + VP RPA + ++W  +   + +A+P     +R  C + F+
Sbjct: 74  LSAPVLVPMPPKVPSRGIQVPPRPAQTQLLWVWVTALLSVAVP-----IRCRCQLRFR 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,463,299
Number of Sequences: 237096
Number of extensions: 1385948
Number of successful extensions: 2816
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)