Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_K05
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 99 5e-22
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 67 2e-12
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 65 1e-11
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 64 2e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 61 1e-10
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 61 2e-10
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 60 4e-10
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 56 4e-09
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 56 6e-09
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 52 5e-08
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 52 1e-07
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 50 3e-07
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 48 2e-06
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 37 0.002
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 30 0.25
SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit 1|Schizosacchar... 29 0.59
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 26 4.1
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 4.1
SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr... 26 5.5
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 5.5
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 26 5.5
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 25 7.2
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.2
SPBC25H2.04c |tim22||TIM22 inner membrane protein import complex... 25 7.2
SPBC428.01c |nup107|SPBC582.11c|nucleoporin Nup107|Schizosacchar... 25 7.2
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 25 7.2
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 99.1 bits (236), Expect = 5e-22
Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +2
Query: 125 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESE-NLFK 301
QN NPH S K S D H+V+KRL+ ELM LM + GISAFP+S+ NL
Sbjct: 6 QNQNPHTNS-----KNSSSAGMAVDGHSVTKRLRSELMSLMMSNTPGISAFPDSDSNLLH 60
Query: 302 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP 421
W GTI GP +T Y G K+K+S+ FP +YPY+PP + F +P
Sbjct: 61 WAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSP 100
Score = 94.3 bits (224), Expect = 1e-20
Identities = 43/73 (58%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +3
Query: 420 PVFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW-PNQ 596
P++HPNVD G ICLDILKDKW+A+Y+V+T+LLS+QSLL EPN SPLN QA+ LW +
Sbjct: 100 PMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDP 159
Query: 597 AAYKKYLDEFYNK 635
YK+ L + Y +
Sbjct: 160 IEYKRLLMQRYKE 172
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 66.9 bits (156), Expect = 2e-12
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +3
Query: 423 VFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYL 584
+FHPNV G +CLDIL+++W+ YDV +L SIQSLL +PN SP N +A+ L
Sbjct: 76 MFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQL 129
Score = 57.2 bits (132), Expect = 2e-09
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +2
Query: 215 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 394
+RL ++ + + G+SA P S+N+ W I GP +T + +KL L F YP
Sbjct: 7 RRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNK 66
Query: 395 PPVVKFMTPCF 427
PP+VKF++ F
Sbjct: 67 PPLVKFVSTMF 77
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 64.9 bits (151), Expect = 1e-11
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3
Query: 423 VFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 587
++HPNVD G ICL LK W+ +RTVLLSIQ+L+ PN PL+ + +W
Sbjct: 74 IYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIW 128
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +2
Query: 206 AVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSY 385
A+ KR+ KE+ L R GI A P +NL + T+ GP ++ Y G K+ L L P+ Y
Sbjct: 2 ALPKRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEY 61
Query: 386 PYAPPVVKFMTPCF 427
P PP V+F+T +
Sbjct: 62 PMMPPNVRFLTKIY 75
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 64.1 bits (149), Expect = 2e-11
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +2
Query: 215 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 394
KR+ +EL +L + SA P ++LF W TI GP ++ YAG + LS+ FP YP+
Sbjct: 4 KRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 395 PPVVKFMT 418
PP V F T
Sbjct: 64 PPKVNFTT 71
Score = 60.9 bits (141), Expect = 2e-10
Identities = 27/73 (36%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 423 VFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW-PNQA 599
++HPN+++ G ICLDIL+D+W+ + VLLSI SLL +PN PL + ++++ +++
Sbjct: 73 IYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRS 132
Query: 600 AYKKYLDEFYNKH 638
Y+ E+ K+
Sbjct: 133 RYELSAREWTRKY 145
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 61.3 bits (142), Expect = 1e-10
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 215 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 394
KRL KE + L + + + A P +EN+ +W I GP +T Y G +Y +L FP YP+
Sbjct: 8 KRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFK 67
Query: 395 PPVVKFMTP 421
PP ++ +TP
Sbjct: 68 PPAIRMITP 76
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 60.9 bits (141), Expect = 2e-10
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +2
Query: 212 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 391
S+RL KE +L I +NLF W T GP ++VYAG K+ SL+FP YP+
Sbjct: 9 SRRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPF 68
Query: 392 APPVVKFMT 418
PP ++F T
Sbjct: 69 QPPTIEFTT 77
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 423 VFHPNVDTCGLICLDILKDK-WTALYDVRTVLLSIQSLLAEPNTQSPL 563
++HPN D+ G +CL ILK + + +R+VL I LL EPN PL
Sbjct: 79 IYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPL 126
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 59.7 bits (138), Expect = 4e-10
Identities = 24/56 (42%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +3
Query: 423 VFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 587
++HPNV + G ICLDILKD+W+ +Y +++ L+S+QSLL P +P + Q + ++
Sbjct: 76 IYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVY 131
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 191 LKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLE 370
+ DN S+R+ KEL ++ + GI + ++++ G GP T Y G + + +E
Sbjct: 1 MSDNR--SRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIE 58
Query: 371 FPNSYPYAPPVVKFMTPCF 427
P YP+ PP + F T +
Sbjct: 59 IPIDYPFRPPKMNFDTKIY 77
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 56.0 bits (129), Expect = 4e-09
Identities = 19/52 (36%), Positives = 36/52 (69%)
Frame = +3
Query: 423 VFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQAS 578
++HPN+D G +CL+IL+ W + ++ ++L+ +Q L PN + PLN++A+
Sbjct: 93 IYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAA 144
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 323 PLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCF 427
P E Y G K+K ++ ++YP+ PP VK + +
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIY 94
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 55.6 bits (128), Expect = 6e-09
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 215 KRLQKELMELMRCSDKGISAFPESEN-LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 391
+RL KE EL GI+A P +E+ F W I GP T + G Y +L+FP+ YP
Sbjct: 8 RRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPL 67
Query: 392 APPVVKF 412
PP +KF
Sbjct: 68 GPPTLKF 74
Score = 45.6 bits (103), Expect = 6e-06
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 13/67 (19%)
Frame = +3
Query: 426 FHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLLSIQSLLAEPNTQSPLN 566
FHPNV G +C+ IL ++W+ + V +LLS+ S+LAEPN +S N
Sbjct: 79 FHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGAN 138
Query: 567 QQASYLW 587
A +W
Sbjct: 139 IDACKMW 145
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 52.4 bits (120), Expect = 5e-08
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 206 AVSKRLQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNS 382
A + L+K+L E+ + +G S + +++F+W I GP +T+Y G + +L FP
Sbjct: 5 ASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQD 64
Query: 383 YPYAPPVVKFMT 418
YP PP +KF T
Sbjct: 65 YPLMPPKMKFTT 76
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 13/65 (20%)
Frame = +3
Query: 423 VFHPNVDTCGLICLDILK-------------DKWTALYDVRTVLLSIQSLLAEPNTQSPL 563
++HPNV G +C+ IL ++W ++ T+L+S+ S+L+ PN +SP
Sbjct: 78 IWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPA 137
Query: 564 NQQAS 578
N A+
Sbjct: 138 NIDAA 142
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +3
Query: 420 PVFHPNVDTCGLICLDILKDK--WTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW-P 590
P+FHPNV G +CL IL ++ W ++ +LL IQ LL +PN SP +A ++
Sbjct: 80 PLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKK 139
Query: 591 NQAAYKK 611
++ Y+K
Sbjct: 140 DKVEYEK 146
Score = 41.5 bits (93), Expect = 1e-04
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 218 RLQKELMELMRCSDKGISAFP--ESE---NLFKWIGTINGPLETVYAGHKYKLSLEFPNS 382
RLQ+E + R G A P S+ +L W I G +T + G YKL++ FP
Sbjct: 8 RLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEE 67
Query: 383 YPYAPPVVKFMTPCF 427
YP PP +F P F
Sbjct: 68 YPTRPPKCRFTPPLF 82
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 50.0 bits (114), Expect = 3e-07
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Frame = +3
Query: 423 VFHPNVDTC-GLICLDILKDKWTALYDVRTVL-LSIQSLLAEPNTQSPLNQQASYLW--- 587
+FHPN+D G +CLD++ W+ ++D+ + + + LL PN PLN +A+ L
Sbjct: 72 IFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLRE 131
Query: 588 PN--QAAYKKYLDEFYNK 635
PN A + Y+ + NK
Sbjct: 132 PNTYYAKVRDYIARYANK 149
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/71 (28%), Positives = 43/71 (60%)
Frame = +2
Query: 215 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 394
+R++ ++M+L+ SD ++ ++N+ ++ +GP ET Y+G +K+ +E P+ YP+
Sbjct: 6 RRIETDVMKLLM-SDYEVTLV--NDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWK 62
Query: 395 PPVVKFMTPCF 427
P + F+ F
Sbjct: 63 SPSIGFVNRIF 73
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 423 VFHPNVD-TCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYL 584
+ HPN+ T G +C+DILK W+ + +++ L+I SLL+ + SPLN A+ L
Sbjct: 77 IVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKL 131
Score = 44.0 bits (99), Expect = 2e-05
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 215 KRLQKELMELMRCSDKGISAF-PESE-NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 388
KRL KE G+ P ++ ++F W I GP ET Y G ++ L + YP
Sbjct: 6 KRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYP 65
Query: 389 YAPPVVKFMT 418
+PP V F T
Sbjct: 66 ISPPSVYFQT 75
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 293 LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMT 418
L W TI GP +V+ Y L + +YP APP+V F++
Sbjct: 38 LSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVS 79
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 30.3 bits (65), Expect = 0.25
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = -3
Query: 450 HTCQHLDEKQGVINLTTGGAYGYEFGNSSDN-LYLWPAYTVSKGPLMVPIHLKRFSLSGN 274
+T Q L + V+N A + F N DN L LW + V PL P L +
Sbjct: 288 NTHQILSQSDVVLNALLSVATAFGFANPVDNVLKLW-QHIVQAIPLDAPFPLLQLPHLLM 346
Query: 273 ADIP-LSLHRISSISSFWS 220
D+ LS+ ISSI F S
Sbjct: 347 EDVKNLSIRNISSIPQFLS 365
>SPCC550.05 |nse1||Smc5-6 complex non-SMC subunit
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 232
Score = 29.1 bits (62), Expect = 0.59
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 263 LYHCTALAPLALSGVVCSQHDCLLV*SCLHSA 168
LY C A + ++G VC CL V C H A
Sbjct: 181 LYECNACREIVIAGYVCDCGYCLHVYCCKHLA 212
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 573 ASYLWPNQAAYKKYLDEFYNKHKD 644
ASYL +A Y KY EF KD
Sbjct: 156 ASYLPAQEAVYNKYFKEFLAHSKD 179
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 125 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMR 250
QNI+ ++ + S K SED KL +N +V + + + ++
Sbjct: 920 QNISTNHTNDSAALKSSEDHSKLANNFSVPDSIDHKFYQQVK 961
>SPAC6C3.04 |cit1||citrate synthase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 5.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +1
Query: 292 PLQMDRDHQWTFRN 333
P+QMD+DH + F N
Sbjct: 237 PIQMDKDHSYNFAN 250
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 146 ASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISA 274
+ + N + S K++HA K+LQKE + +D + A
Sbjct: 91 SEAENDEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSLKA 133
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 350 KYKLSLEFPNSYPYAPPVVK 409
K L +E SYPY PV+K
Sbjct: 62 KLDLCIELGRSYPYVKPVIK 81
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 128 NINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELM--RCSDKGISAFPESENLFK 301
N P+Y SS P +ED + ++++ A +K+ + + + K S F E +
Sbjct: 175 NCWPYYTSS--PTSDAEDLVYIQNSKATNKKYMATVSPIFYTHFTSKNYSFFSEGLWFTR 232
Query: 302 WIGTI 316
W+ I
Sbjct: 233 WMQLI 237
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1073
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -3
Query: 471 KYLNILSHTCQHLDEKQGVINLTTGGAYGYEFGNSSDNLYLWPAYTVSKGPLMVPIHL 298
KY N L C H+ V +TT G Y+ NS WP+ + P+ P L
Sbjct: 764 KYTNTLIIGCCHVL----VNEITTSGLAFYDLTNSRLFPVNWPSMDIKGKPIFKPEEL 817
>SPBC25H2.04c |tim22||TIM22 inner membrane protein import complex
subunit Tim22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 175
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 477 LLKYLNILSHTCQHLDEKQGVINLTTGGAYGYEFGNSSDNLYLWP 343
++ Y+N +S +C GV+ GG +G F +S D ++ P
Sbjct: 35 IIGYMNRISESCVFKSSMAGVLGFGLGGIFGM-FISSLDLQHIDP 78
>SPBC428.01c |nup107|SPBC582.11c|nucleoporin
Nup107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 794
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 519 SIQSLLAEPNTQSPLNQQASYLWPNQAAYKKYLDEFYNK 635
SIQ L+ ++ +NQ + PN+ A L + Y K
Sbjct: 23 SIQELIEMDEEEAEMNQNVVCIGPNETAVSVELGDEYEK 61
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 356 KLSLEFPNSYPYAPPVVKFMTPCF 427
KLS+E+ N P AP +V CF
Sbjct: 112 KLSMEWDNIMPNAPGLVNLGNTCF 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,715,358
Number of Sequences: 5004
Number of extensions: 58043
Number of successful extensions: 203
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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