Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_J24
(497 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842 137 4e-33
04_04_0299 - 24243364-24244259,24244417-24244428,24245092-242451... 130 5e-31
03_05_0387 + 23708447-23708470,23708616-23708739,23709081-237092... 45 4e-05
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 38 0.006
01_06_0521 + 30001662-30001752,30001883-30001999,30002099-300022... 37 0.010
03_02_0315 - 7401708-7401860,7401962-7402123,7402211-7402279,740... 35 0.042
06_01_0042 + 410061-410544,411401-411837 34 0.073
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 29 1.6
03_02_0930 - 12480983-12481888 29 1.6
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159... 29 2.1
06_03_0398 - 20379748-20379820,20379930-20380024,20380127-203802... 29 2.7
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 28 3.6
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 3.6
11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229 28 3.6
07_03_0028 + 12611734-12612522 28 3.6
03_01_0515 - 3864796-3865425 28 3.6
03_06_0680 - 35497868-35497884,35498058-35501961 28 4.8
02_05_0729 - 31271566-31271730,31271799-31271933,31272210-312722... 28 4.8
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 28 4.8
11_01_0791 + 6627961-6630702 27 6.3
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 27 6.3
03_06_0404 + 33692534-33693607 27 6.3
02_02_0123 + 7015905-7015928,7015975-7016105,7017675-7017940,701... 27 6.3
08_02_0076 + 11967606-11967905,11969125-11969223,11969813-119741... 27 8.4
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 27 8.4
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480... 27 8.4
05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351 27 8.4
05_01_0471 - 3751497-3751522,3751760-3751800,3752466-3752507,375... 27 8.4
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 27 8.4
04_03_0313 + 14233049-14234362,14234558-14235523 27 8.4
>02_04_0505 - 23534273-23535171,23536545-23536646,23536776-23536842
Length = 355
Score = 137 bits (332), Expect = 4e-33
Identities = 66/112 (58%), Positives = 82/112 (73%)
Frame = +2
Query: 161 SSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQRLSNVKHKI 340
S VP +A +HCPGTQSE+AGKA ACAGCPNQ ICA+ PDP + I +R++ VKHKI
Sbjct: 14 SDVPADANEHCPGTQSEEAGKADACAGCPNQQICATAPKG-PDPDLVGIVERMATVKHKI 72
Query: 341 LILSGKGGVGKSTVTSIIGXGLASMSPDINVGXLDADICGPSPARVLGVRGE 496
L+LSGKGGVGKST ++ + LA M D VG LD DICGPS ++LG+ G+
Sbjct: 73 LVLSGKGGVGKSTFSAQLSFALAEM--DCQVGLLDIDICGPSIPKMLGLEGQ 122
>04_04_0299 -
24243364-24244259,24244417-24244428,24245092-24245193,
24245298-24245340
Length = 350
Score = 130 bits (315), Expect = 5e-31
Identities = 66/114 (57%), Positives = 80/114 (70%), Gaps = 4/114 (3%)
Frame = +2
Query: 167 VPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPA----VELIKQRLSNVKH 334
VP+NA HCPGTQSE AGKA ACAGCPNQ ICA+ PDP + I +R++ VKH
Sbjct: 8 VPENANDHCPGTQSEAAGKADACAGCPNQQICATAPKG-PDPGAITHLLAIIERMNTVKH 66
Query: 335 KILILSGKGGVGKSTVTSIIGXGLASMSPDINVGXLDADICGPSPARVLGVRGE 496
KIL+LSGKGGVGKST ++ + LA M D VG LD DICGPS ++LG+ G+
Sbjct: 67 KILVLSGKGGVGKSTFSAQLSFALAEM--DHQVGLLDIDICGPSIPKMLGLEGQ 118
>03_05_0387 +
23708447-23708470,23708616-23708739,23709081-23709203,
23710723-23710820,23711778-23711918,23712236-23712361,
23713316-23713486
Length = 268
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = +2
Query: 317 LSNVKHKILILSGKGGVGKSTVTSIIGXGLASMSPDINVGXLDADICGPS 466
++ V I + SGKGGVGKST I LA + VG LDADI GPS
Sbjct: 27 IAGVSDIIAVASGKGGVGKSTTAVNIAVALAKKF-QLKVGLLDADIYGPS 75
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 269 GEASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSIIGXGLASMSPDINV 433
G+ + PDP V + L K + + GKGGVGK+T +SI+ LAS + V
Sbjct: 6 GDGAMPDPTV---RNLLEQESLKWVFVGGKGGVGKTTCSSILSILLASARQSVLV 57
>01_06_0521 +
30001662-30001752,30001883-30001999,30002099-30002229,
30002320-30002370,30002639-30002689,30002864-30003007,
30003082-30003224,30003376-30003448,30003540-30003635,
30003737-30003835,30003905-30003958,30004032-30004155,
30004420-30004544,30004720-30004842,30004948-30005028
Length = 500
Score = 36.7 bits (81), Expect = 0.010
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2
Query: 356 KGGVGKSTVTSIIGXGLASMSPDINVGXLDADICGPS 466
KGGVGKSTV + LA M VG DAD+ GPS
Sbjct: 147 KGGVGKSTVAVNLAYTLAGMG--ARVGIFDADVFGPS 181
>03_02_0315 -
7401708-7401860,7401962-7402123,7402211-7402279,
7403332-7403596,7404613-7404737,7404826-7404933,
7405102-7405249,7406013-7406065
Length = 360
Score = 34.7 bits (76), Expect = 0.042
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 KQRLSNVKHKILILSGKGGVGK-STVTSIIGXGLASMS 418
K + NV +++ GKGGVGK STV SI+G +A++S
Sbjct: 63 KLKEENVSTLTILVMGKGGVGKSSTVNSIVGERVATVS 100
>06_01_0042 + 410061-410544,411401-411837
Length = 306
Score = 33.9 bits (74), Expect = 0.073
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 338 ILILSGKGGVGKSTVTSIIGXGLASMSPDINVGXLDAD 451
+++ SGKGGVGK+T T+ + LA +S ++ +DAD
Sbjct: 39 VVVTSGKGGVGKTTTTANLAASLARLS--LSAVAVDAD 74
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 155 NMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEA--SQPDPAVELIKQRLSNV 328
N + + H P Q+ D G S+ G PNQ + S +A P + +QR N
Sbjct: 1806 NQPKIYGSQMPHSP-IQTSDVGSQSSMQGSPNQTMLTSQQAPLHSSSPLAQQQQQRYMNP 1864
Query: 329 KH 334
H
Sbjct: 1865 SH 1866
>03_02_0930 - 12480983-12481888
Length = 301
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 152 SNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQ 253
S+ S+VP AP+ P + G + C CPN+
Sbjct: 38 SDASAVPPAAPRQPPAAAAPAGGLSPCCCYCPNR 71
>12_02_0478 +
19514509-19514940,19515749-19515820,19515954-19515986,
19516169-19516830,19516905-19517045,19518634-19518830,
19518878-19518965,19518987-19519041,19519501-19519571,
19519709-19519763,19519881-19519896,19520286-19520361,
19521202-19521240,19521312-19521333
Length = 652
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 492 PRTPSTRAGLGPQMSASSXPTFISGLIDARPXPIXDVTVLFPTPP 358
P P R L P+ +A S +G DA P P+ + LFP+ P
Sbjct: 6 PPPPRPRLALPPRSAAES---LFTGAGDASPGPLTLASALFPSDP 47
>06_03_0398 -
20379748-20379820,20379930-20380024,20380127-20380222,
20380342-20380501,20380844-20381016,20381102-20381206,
20381460-20381565,20381741-20381947,20383478-20383563,
20383655-20383846
Length = 430
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 486 TPSTRAGLGPQMSASSXPTFISGLIDARPXPIXDVTVLFPTPPLPDKIRI 337
TP R L ++A S ++ + A PI VT F P PDK+ +
Sbjct: 13 TPVARRRLMGAVAARSMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNV 62
>12_02_0496 +
19704429-19704613,19705874-19706736,19706764-19706951,
19707190-19708200
Length = 748
Score = 28.3 bits (60), Expect = 3.6
Identities = 9/32 (28%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +2
Query: 302 LIKQRLSNVKHK-ILILSGKGGVGKSTVTSII 394
++++ L +H+ ++++ G GG+GK+T+ S++
Sbjct: 85 IMERLLQPTEHREVIVIVGMGGIGKTTLASLV 116
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 308 KQRLSNVKHKILILSGKGGVGKSTVTSIIGXGLASMSPDIN 430
KQ S K K ++LSG G+GK+T ++ L + ++N
Sbjct: 443 KQADSGAK-KAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVN 482
>11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229
Length = 632
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 302 LIKQRLSNVKHKILILSGKGGVGKSTVTSII 394
LIK+ + +L + G+GG+GKST+ +
Sbjct: 197 LIKKSAFEASYMVLAIVGQGGMGKSTLAQYV 227
>07_03_0028 + 12611734-12612522
Length = 262
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +2
Query: 137 RQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVELIKQR 316
+Q ++ ++ + + PGT S G + P + + A +S P P + +
Sbjct: 19 QQATVAATATATSDGIRDSPGTSSPFRGGGGSTTPTPQRPVKAGSSSSPPPPPTTAMDKT 78
Query: 317 LSNVKHKILIL 349
LS+V + +L
Sbjct: 79 LSSVANLAKLL 89
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 495 SPRTPSTRAGLGPQMSA-SSXPTFISGLIDARPXPIXDVTVLFPTPPLP 352
SP T ++ L P S SS P +G + P P VT P PPLP
Sbjct: 41 SPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLP 89
>03_06_0680 - 35497868-35497884,35498058-35501961
Length = 1306
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +2
Query: 128 INSRQIVISNMSSVP-DNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVEL 304
+N +++I+ M++ + P+ P S K + NI + +
Sbjct: 126 VNEMEVLIAEMNAFRFEFRPE--PPISSMKWRKTDCKISNLSMNIAIRSRSEDKQKIINT 183
Query: 305 IKQRLSNVKHKILILSGKGGVGKSTVTSII 394
+ ++SN +L + G GG+GK+T+ +I
Sbjct: 184 LLAQVSNRDLTVLPIVGMGGMGKTTLVQLI 213
>02_05_0729 -
31271566-31271730,31271799-31271933,31272210-31272284,
31273003-31273068,31273154-31273222,31273303-31273377,
31273518-31273628,31273947-31274009,31274064-31274453
Length = 382
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 263 ASGEASQPDPAVEL-IKQRLSNVKHKILILSGKGGVGKSTVTSIIGXGLAS 412
AS A+ + A E+ ++ + + + +L GKGGVGK++ + + A+
Sbjct: 45 ASAAAAAKEGAEEMGFEEMAAGTRRRYYMLGGKGGVGKTSCAASLAVRFAN 95
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 269 GEASQPDPAVELIKQRLSNVKHKILILS--GKGGVGKSTVTSII 394
G + + +L+ N K+K+ ++S G GG+GK+T+ ++I
Sbjct: 168 GISGPKEELTKLLMDSKGNSKNKLKVISIVGVGGLGKTTLANVI 211
>11_01_0791 + 6627961-6630702
Length = 913
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 332 HKILILSGKGGVGKSTV 382
HK++ +SG GG+GK+T+
Sbjct: 192 HKVITVSGMGGLGKTTL 208
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 311 QRLSNVKHKILILSGKGGVGKSTVTSIIGXGLASMSPDINV 433
Q L N + + GK G+G TV G+A+++ INV
Sbjct: 43 QILKNKVEDLAVARGKKGLGDGTVGMFSWLGIAAVAGSINV 83
>03_06_0404 + 33692534-33693607
Length = 357
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 290 PAVELIKQRLSNVKHKILILSGKGGVGKS 376
P L+ + + VKHK +++ G G GKS
Sbjct: 38 PVAPLVLRHGAGVKHKAVVVMGATGTGKS 66
>02_02_0123 +
7015905-7015928,7015975-7016105,7017675-7017940,
7018239-7018327,7018716-7018811,7018874-7018969,
7019121-7019251,7020123-7020177,7020645-7020800,
7021238-7021306,7021392-7021499,7022128-7022196,
7022743-7022797,7023031-7023227
Length = 513
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 311 QRLSNVKHKILILSGKGGVGKSTVTSIIGXGLASMSPDINV 433
Q L N + + GK G+G TV G+A+++ INV
Sbjct: 242 QILKNKVEDLAVARGKKGLGDGTVGMFSWLGIAAVAGSINV 282
>08_02_0076 +
11967606-11967905,11969125-11969223,11969813-11974124,
11974177-11974211
Length = 1581
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 269 GEASQPDPAV-ELIKQRLSNVKHKILILSGKGGVGKSTVTSII 394
G Q D + +L + + K IL + G GG+GK+T+ ++
Sbjct: 260 GRDQQRDLIISKLTSEECARKKLSILAIIGDGGIGKTTLAKLV 302
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 320 SNVKHKILILSGKGGVGKSTVTSII 394
SN K KI+ + G GG+GK+T+ + +
Sbjct: 195 SNRKTKIVYVVGMGGLGKTTLATAV 219
>06_03_0783 -
24546403-24546765,24547202-24547262,24547899-24548004,
24548118-24551600,24553134-24553179
Length = 1352
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 323 NVKHKILILSGKGGVGKSTVTSII 394
+V +++ + G GG+GK+T+T +I
Sbjct: 243 SVSPEVITIVGTGGIGKTTLTQLI 266
>05_05_0318 + 24052022-24053858,24053935-24054132,24054363-24055351
Length = 1007
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 320 SNVKHKILILSGKGGVGKSTVTSII 394
++V IL + G GGVGK+T+T ++
Sbjct: 191 NHVNLSILPIVGMGGVGKTTLTQLV 215
>05_01_0471 -
3751497-3751522,3751760-3751800,3752466-3752507,
3753249-3753310,3753398-3753584,3753692-3753826,
3753872-3753948,3754005-3754076,3754389-3754588,
3754675-3755020,3755463-3755519,3755655-3757433,
3757539-3757720,3757943-3758072
Length = 1111
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 167 VPDNAPQHCPGTQSEDAGKASACAGCPNQNI 259
VPDNA CP + + +A CP+Q++
Sbjct: 569 VPDNASLPCPEQHVPEETQINAGLSCPDQHL 599
>04_04_1197 +
31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 269 GEASQPDPAVELIKQRLSNVKHKILILSGKGGVGKSTVTSII 394
G A++ + +LI SN +L + G GG+GK+T+ ++
Sbjct: 318 GRAAEMETIKQLIMSNRSN-GITVLPIVGNGGIGKTTLAQLV 358
>04_03_0313 + 14233049-14234362,14234558-14235523
Length = 759
Score = 27.1 bits (57), Expect = 8.4
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = +2
Query: 125 RINSRQIVISNMSSVPDNAPQHCPGTQSEDAGKASACAGCPNQNICASGEASQPDPAVEL 304
R N R +VI M VP AG A + + + GE+S+ P +
Sbjct: 180 RDNERDLVIEKMG-VPLTRFVAARAKGKRAAGGTVAKSASTPKRL--KGESSRAGPRISQ 236
Query: 305 IKQRLSNVKHKILILSGKGGVGKSTVTSII 394
K + NV IL + G GGVGK+T+ I
Sbjct: 237 SKC-IGNVS--ILPIFGIGGVGKTTLAQYI 263
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,217,799
Number of Sequences: 37544
Number of extensions: 274975
Number of successful extensions: 1028
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -