Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_J14
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   154   5e-38
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   154   5e-38
AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7 pr...    27   7.3  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  154 bits (373), Expect = 5e-38
 Identities = 73/104 (70%), Positives = 78/104 (75%)
 Frame = +1

Query: 55  MGAYRYXQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
           MGAYRY QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ   
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEE 366
                              TYGKPKSHGVNQLKP R LQSIAEE
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEE 104


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  154 bits (373), Expect = 5e-38
 Identities = 73/104 (70%), Positives = 78/104 (75%)
 Frame = +1

Query: 55  MGAYRYXQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 234
           MGAYRY QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ   
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 235 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEE 366
                              TYGKPKSHGVNQLKP R LQSIAEE
Sbjct: 61  IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEE 104


>AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7
            protein.
          Length = 1012

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 285  GCHLWQAQEPWCQPVEAHAQPSIHC*GTCXPSLRWSPC 398
            G HL+      CQP    ++P  HC G    +L W  C
Sbjct: 968  GQHLYLCCSTTCQP---SSEPGAHCLGRLCGALLWGGC 1002


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,363,900
Number of Sequences: 53049
Number of extensions: 411960
Number of successful extensions: 1252
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)