Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_J09
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 100 5e-21
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 100 5e-21
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 100 5e-21
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 100 5e-21
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 100 5e-21
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 56 4e-08
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 40 0.004
BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein. 29 9.7
BC014635-1|AAH14635.1| 395|Homo sapiens SH3-domain GRB2-like en... 29 9.7
AL592211-2|CAI12365.1| 404|Homo sapiens SH3-domain GRB2-like en... 29 9.7
AL592211-1|CAI12366.1| 395|Homo sapiens SH3-domain GRB2-like en... 29 9.7
AF257319-1|AAF81226.1| 395|Homo sapiens SH3-containing protein ... 29 9.7
AB058751-1|BAB47477.2| 445|Homo sapiens KIAA1848 protein protein. 29 9.7
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 99.5 bits (237), Expect = 5e-21
Identities = 50/102 (49%), Positives = 65/102 (63%)
Frame = +3
Query: 129 KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAKNL 308
KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKPA +
Sbjct: 19 KRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSY 77
Query: 309 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILR 434
+R AR +L ++ +++ N YR DL A +RRASAILR
Sbjct: 78 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 99.5 bits (237), Expect = 5e-21
Identities = 50/102 (49%), Positives = 65/102 (63%)
Frame = +3
Query: 129 KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAKNL 308
KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKPA +
Sbjct: 19 KRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSY 77
Query: 309 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILR 434
+R AR +L ++ +++ N YR DL A +RRASAILR
Sbjct: 78 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 99.5 bits (237), Expect = 5e-21
Identities = 50/102 (49%), Positives = 65/102 (63%)
Frame = +3
Query: 129 KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAKNL 308
KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKPA +
Sbjct: 19 KRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSY 77
Query: 309 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILR 434
+R AR +L ++ +++ N YR DL A +RRASAILR
Sbjct: 78 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 99.5 bits (237), Expect = 5e-21
Identities = 50/102 (49%), Positives = 65/102 (63%)
Frame = +3
Query: 129 KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAKNL 308
KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKPA +
Sbjct: 19 KRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSY 77
Query: 309 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILR 434
+R AR +L ++ +++ N YR DL A +RRASAILR
Sbjct: 78 VRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 99.5 bits (237), Expect = 5e-21
Identities = 50/102 (49%), Positives = 65/102 (63%)
Frame = +3
Query: 129 KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAKNL 308
KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ RKPA +
Sbjct: 19 KRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSY 77
Query: 309 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILR 434
+R AR +L ++ +++ N YR DL A +RRASAILR
Sbjct: 78 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 119
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 56.4 bits (130), Expect = 4e-08
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +3
Query: 129 KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKK 275
KRN K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+
Sbjct: 27 KRN-KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKR 74
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 39.9 bits (89), Expect = 0.004
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 309 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILR 434
+R AR +L ++ +++ N YR DL A +RRASAILR
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 45
>BC064553-1|AAH64553.1| 187|Homo sapiens PRH1 protein protein.
Length = 187
Score = 28.7 bits (61), Expect = 9.7
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +2
Query: 203 LDSQESRWCRGEP*QEGIHSSVQESKGYQKAR*KLNPPSIQGWCQEVTVQSEEVVKG*PL 382
L Q+S+ G+ Q+ Q+ Q + + PP QG Q Q + +G P
Sbjct: 51 LGGQQSQPSAGDGNQD---DGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGQQQQGPPP 107
Query: 383 PHRPMQGYPSSCFSHPPXPRG 445
P QG P HPP P+G
Sbjct: 108 PQGKPQGPPQQ-GGHPPPPQG 127
>BC014635-1|AAH14635.1| 395|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 315 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 425
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AL592211-2|CAI12365.1| 404|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 404
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 315 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 425
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AL592211-1|CAI12366.1| 395|Homo sapiens SH3-domain GRB2-like
endophilin B2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 315 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 425
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AF257319-1|AAF81226.1| 395|Homo sapiens SH3-containing protein
SH3GLB2 protein.
Length = 395
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 315 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 425
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 145 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 181
>AB058751-1|BAB47477.2| 445|Homo sapiens KIAA1848 protein protein.
Length = 445
Score = 28.7 bits (61), Expect = 9.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 315 RPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASA 425
R F G +++ K +RLL+ D CKA L++A A
Sbjct: 186 RNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKA 222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,397,215
Number of Sequences: 237096
Number of extensions: 1432529
Number of successful extensions: 9721
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9721
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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