Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_I24
(314 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 106 3e-24
U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical pr... 29 0.93
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical pr... 27 2.1
AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical ... 27 3.8
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 26 5.0
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 26 5.0
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 25 8.7
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 25 8.7
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 25 8.7
U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,... 25 8.7
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 25 8.7
AC024880-3|AAF60915.3| 675|Caenorhabditis elegans Hypothetical ... 25 8.7
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 25 8.7
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 25 8.7
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 106 bits (255), Expect = 3e-24
Identities = 48/88 (54%), Positives = 66/88 (75%)
Frame = +2
Query: 38 KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 217
K++K+ G E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P
Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66
Query: 218 KLKAFQKIQIRLVRELEKKFSGKHVVFV 301
+LKAF KI LVRELEKKF G+ ++ +
Sbjct: 67 QLKAFHKIHPALVRELEKKFGGRDILIL 94
>U23486-3|AAL38955.1| 529|Caenorhabditis elegans Hypothetical
protein F07F6.4 protein.
Length = 529
Score = 28.7 bits (61), Expect = 0.93
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 102 SNSKPTPTSKPNFGSFTLQKLKKLNYTIRSRSSSMCR 212
S+SK T F SF Q ++K YT S SSS R
Sbjct: 376 SSSKKTTKEDDFFDSFETQPVQKSRYTASSSSSSTSR 412
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 14 VKLSXMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKS 193
+K + + K I+A + T S+ L ELE Q +E + K++E+E+ NK+
Sbjct: 242 LKANEKARKEIEAEAEKWKDRATRNSKRLPELELELAETVQAKEEWQVKSQEMEIQNKQL 301
Query: 194 I 196
+
Sbjct: 302 V 302
>Z78420-2|CAB01710.3| 738|Caenorhabditis elegans Hypothetical
protein F45H11.3 protein.
Length = 738
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 124 VGVGFEFDQRLRDRGLEGIRLSTARFDDL 38
V VGFE RLRD+GL +LS +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550
>AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical
protein H29C22.1 protein.
Length = 145
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 89 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 208
S+A ++LE N D+ E + K + E +NK+ + Y+
Sbjct: 33 SRAAIKLENNDDVPELFHENFEFKTCKEERYNKEQTVDYI 72
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +2
Query: 80 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 259
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLVA 2273
Query: 260 ELEKKFSGKHVVFV 301
K F+
Sbjct: 2274 TSSGKQVSSEAEFI 2287
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +2
Query: 80 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 259
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLVA 2273
Query: 260 ELEKKFSGKHVVFV 301
K F+
Sbjct: 2274 TSSGKQVSSEAEFI 2287
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +2
Query: 80 TSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVR 259
TSI Q L+ ++ + + E ++ +K+IE+H + + + QK ++LV
Sbjct: 2214 TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDYEKTQKYDLKLVA 2273
Query: 260 ELEKKFSGKHVVFV 301
K F+
Sbjct: 2274 TSSGKQVSSEAEFI 2287
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 111 SSSTSACEIEVSKESASAPLALMIFVL 31
+S+TS+C I+ +S S+P AL VL
Sbjct: 95 ASTTSSCPIQSCSQSFSSPAALTWHVL 121
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 111 SSSTSACEIEVSKESASAPLALMIFVL 31
+S+TS+C I+ +S S+P AL VL
Sbjct: 66 ASTTSSCPIQSCSQSFSSPAALTWHVL 92
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 111 SSSTSACEIEVSKESASAPLALMIFVL 31
+S+TS+C I+ +S S+P AL VL
Sbjct: 95 ASTTSSCPIQSCSQSFSSPAALTWHVL 121
>U49829-4|AAK68350.1| 427|Caenorhabditis elegans Dehydrogenases,
short chain protein29 protein.
Length = 427
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 163 SFCNVKLPKLGFEVGVGFEFDQRLRDRGLEGIRLST 56
S+C K G + E LRDRGLEGI+ +T
Sbjct: 189 SYCTSKFAVRGAMESLQME----LRDRGLEGIKTTT 220
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +2
Query: 53 SGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAF 232
+G +A+ T + V + L + L + I K + + NK+ I VPM K+ A
Sbjct: 626 AGEKANVTFTGEGKKEVYASVDDHLLSDLLDAPIGLTKRLLIENKEDISTIVPMGKMAAI 685
Query: 233 QKIQIR 250
+ ++
Sbjct: 686 NRACVK 691
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 130 FEVGVGFEFDQRLRDRGLEGIRLSTARFDDLRTH 29
+E GF+ QR+ DR LE A LR H
Sbjct: 234 YEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQH 267
>AC024880-3|AAF60915.3| 675|Caenorhabditis elegans Hypothetical
protein Y97E10AR.1 protein.
Length = 675
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 289 MFTTELLFELTDKPDLDLLKGLQFRHRHIDDD 194
MF E+ + L +LK QF H+++D D
Sbjct: 116 MFNVEISIKFDKWEGLKVLKLFQFDHQYLDSD 147
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 130 FEVGVGFEFDQRLRDRGLEGIRLSTARFDDLRTH 29
+E GF+ QR+ DR LE A LR H
Sbjct: 234 YEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQH 267
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 25.4 bits (53), Expect = 8.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 130 FEVGVGFEFDQRLRDRGLEGIRLSTARFDDLRTH 29
+E GF+ QR+ DR LE A LR H
Sbjct: 234 YEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQH 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,478,021
Number of Sequences: 27780
Number of extensions: 114917
Number of successful extensions: 354
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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