Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_I22
(341 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 111 1e-25
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 111 1e-25
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 111 1e-25
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 81 2e-16
07_03_1358 - 25984897-25984997,25985623-25985650 37 0.005
01_06_0939 - 33188620-33189252,33189570-33189680,33190460-331906... 28 1.7
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 27 2.9
03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,634... 27 5.1
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 26 6.7
02_04_0492 - 23424745-23425890 26 6.7
02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,208... 26 6.7
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 111 bits (267), Expect = 1e-25
Identities = 51/77 (66%), Positives = 64/77 (83%)
Frame = +3
Query: 111 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 290
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 19 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 78
Query: 291 LRRLVRIGVLDEXQMKL 341
LRR+ R G+L + Q KL
Sbjct: 79 LRRMNRYGLLADGQNKL 95
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 111 bits (267), Expect = 1e-25
Identities = 51/77 (66%), Positives = 64/77 (83%)
Frame = +3
Query: 111 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 290
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 42 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 101
Query: 291 LRRLVRIGVLDEXQMKL 341
LRR+ R G+L + Q KL
Sbjct: 102 LRRMNRYGLLADGQNKL 118
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 111 bits (267), Expect = 1e-25
Identities = 51/77 (66%), Positives = 64/77 (83%)
Frame = +3
Query: 111 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 290
RP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG AL
Sbjct: 235 RPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEAL 294
Query: 291 LRRLVRIGVLDEXQMKL 341
LRR+ R G+L + Q KL
Sbjct: 295 LRRMNRYGLLADGQNKL 311
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 81.4 bits (192), Expect = 2e-16
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +3
Query: 111 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 290
RP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P+R+FEG AL
Sbjct: 19 RPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRRIFEGEAL 67
Query: 291 LRRLVRIGVLDEXQMKL 341
LR + R G+L E Q KL
Sbjct: 68 LRHMNRYGLLGEGQNKL 84
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 36.7 bits (81), Expect = 0.005
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 111 RPFEKARLDQELKIIGEYG 167
RP+EK RLD ELK++GEYG
Sbjct: 19 RPYEKERLDAELKLVGEYG 37
>01_06_0939 -
33188620-33189252,33189570-33189680,33190460-33190668,
33190781-33191078
Length = 416
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 138 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 260
Q L+ I G+ + +E++ + +L RIR R LT+E D
Sbjct: 212 QRLQTIHLLGIDDNQEIFTTQTSLTRIRAVPRYSLTIESLD 252
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 117 FEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR----ELLTLE 251
FE A+ ++ KII E R+ ++ +KY LA A ELL L+
Sbjct: 394 FEMAKQEESKKIISEEHQRSNEQITDLKYKLANCMNALESKNLELLNLQ 442
>03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,
6349369-6349475,6349608-6349733,6349809-6349890,
6350057-6350130,6351184-6352631,6353391-6353540,
6353664-6353906,6354009-6354266,6355554-6356015
Length = 1130
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 197 DAPYFTLVAETVLSDDLQLLVKTCLFKRTXEV 102
D PYF+L A ++D ++LVK C K + ++
Sbjct: 1017 DTPYFSLDACCFINDIQEVLVKLCPTKISCDI 1048
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 26.2 bits (55), Expect = 6.7
Identities = 23/55 (41%), Positives = 27/55 (49%)
Frame = -3
Query: 195 RAILHACCGDRTLR*SSTLGQDVPFQKDXRGVTYVFENTDGTLLFTILASSHALL 31
RA L ACCG R +R L DV VT V + G+ LF +SSH LL
Sbjct: 180 RAALFACCGCRNIRGLHML-LDVSTASGCAVVT-VLRHFPGSQLF--WSSSHILL 230
>02_04_0492 - 23424745-23425890
Length = 381
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 122 FKRTXEVSRTSLKIPTVLCCSPSWRARTHCSPIRIRKA 9
+ + +++ T +K+P C + R T CSP I +A
Sbjct: 80 YHKCFQIADTLVKVPNARICCSTGRRLTLCSPKSILQA 117
>02_01_0312 -
2082614-2082677,2082815-2082945,2083041-2083129,
2083223-2083292,2083429-2083509,2083768-2083821,
2084864-2085067,2086272-2086366,2086976-2086997,
2087492-2087585,2087677-2087764,2087874-2087979,
2088103-2088189,2088261-2088309,2088418-2088521,
2088605-2088697,2088900-2088974,2089316-2089384,
2090182-2090250,2090339-2090374,2090471-2090565,
2090836-2090911,2091067-2091153,2091287-2091355,
2091654-2091731,2091836-2091925,2092436-2092642,
2092736-2092879
Length = 841
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = +3
Query: 114 PFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEK 257
P KA LD K IG+ L R RV YT K E L EEK
Sbjct: 709 PTGKASLDGVSKCIGDAFLVTVRNKKRVGYTYELSLKFKGEWLIKEEK 756
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,544,780
Number of Sequences: 37544
Number of extensions: 130506
Number of successful extensions: 306
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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