Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_I22
         (341 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical pr...   142   6e-35
Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical pr...    27   2.7  
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    26   8.1  

>Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical
           protein F40F8.10 protein.
          Length = 189

 Score =  142 bits (344), Expect = 6e-35
 Identities = 66/77 (85%), Positives = 74/77 (96%)
 Frame = +3

Query: 111 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 290
           RPFEK RLDQELK+IG +GL+NKREVWRVKYTLA++RKAARELLTLE+KDPKRLFEGNAL
Sbjct: 17  RPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNAL 76

Query: 291 LRRLVRIGVLDEXQMKL 341
           LRRLV+IGVLDE +MKL
Sbjct: 77  LRRLVKIGVLDETKMKL 93


>Z48795-7|CAA88731.1|  347|Caenorhabditis elegans Hypothetical
           protein R05H5.1 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 102 VTYVFENTDGTLLFTILASSH 40
           + YVF+N+D  LLF IL   H
Sbjct: 160 LVYVFDNSDSDLLFQILTRVH 180


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +3

Query: 54  RW*TTEYRRYFQRRT*HLXRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAR 233
           RW  TE  +   +R     R  E  +L++   +  E   RN+R+ W  K T  R  + + 
Sbjct: 304 RWLFTEGSQTTPQRVRRATRAQELYKLEKTRGMYWEDLSRNERKAWSEKLTQLRKLQKSL 363

Query: 234 ELLTL 248
           E L L
Sbjct: 364 EALKL 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,364,532
Number of Sequences: 27780
Number of extensions: 108700
Number of successful extensions: 319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 319
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)