Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_I21
         (539 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006677-1|AAF39948.1|  331|Caenorhabditis elegans Serpentine re...    31   0.53 
AL021491-2|CAA16375.1|  319|Caenorhabditis elegans Hypothetical ...    27   6.5  
Z81557-1|CAB04535.1|  343|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine rece...    27   8.6  
U23510-2|AAC46787.1|  250|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U23510-1|AAN60495.1|  245|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AC024799-1|AAK72316.1|  349|Caenorhabditis elegans Serpentine re...    27   8.6  

>AC006677-1|AAF39948.1|  331|Caenorhabditis elegans Serpentine
           receptor, class x protein26 protein.
          Length = 331

 Score = 31.1 bits (67), Expect = 0.53
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 316 TEKISQNFGXTTPQLCVLNMXTC*ICLCVIDKAGLLPSEY 435
           TE +  +FG  T  L V N+  C +CL  +    L PS +
Sbjct: 32  TESMKNSFGIITKNLAVCNIGMCGLCLFFLFPMQLAPSSF 71


>AL021491-2|CAA16375.1|  319|Caenorhabditis elegans Hypothetical
           protein Y44A6B.3 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 279 LSNENNYDIGGAYRKDKPEFWFXYTTTMCPKHVYL 383
           L N+  Y +   +  D P F+F YT ++CP++  L
Sbjct: 114 LVNKTIYSL--EFYSDDPYFYFNYTVSICPENSIL 146


>Z81557-1|CAB04535.1|  343|Caenorhabditis elegans Hypothetical
           protein F59A1.3 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -1

Query: 335 FWLIFSVCTPYVIVIFIAKFKVRIHNAKVCGFRRLTSEHSRYVSILWLIFGF 180
           FW I   CT Y +++ +  F        VC           YV+IL LIF F
Sbjct: 88  FWYIALNCTCYSMIMLLLVFHFLYRYLAVCKPNMSKLFSFPYVTILILIFVF 139


>U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine
           receptor, class x protein3 protein.
          Length = 349

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -1

Query: 230 TSEHSRYVSILWLIFGFEVXFDTFLYIVQHMRRIYIVKQQSHRLLFT 90
           T + S++  +    F F   F+TF  IV  + R  ++  Q H +  T
Sbjct: 78  TEKKSKWTLVFGSAFLFFWYFETFTQIVMALNRYLVICLQKHHIFTT 124


>U23510-2|AAC46787.1|  250|Caenorhabditis elegans Hypothetical
           protein R12C12.9a protein.
          Length = 250

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 365 THSCGVVKPKFWLIFSVCTPYVIVIFIAKF 276
           +H C V +   W++F V   YV+V+ IA F
Sbjct: 113 SHLCLVRRKLAWVMFLVIAVYVVVLGIAVF 142


>U23510-1|AAN60495.1|  245|Caenorhabditis elegans Hypothetical
           protein R12C12.9b protein.
          Length = 245

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 365 THSCGVVKPKFWLIFSVCTPYVIVIFIAKF 276
           +H C V +   W++F V   YV+V+ IA F
Sbjct: 113 SHLCLVRRKLAWVMFLVIAVYVVVLGIAVF 142


>AC024799-1|AAK72316.1|  349|Caenorhabditis elegans Serpentine
           receptor, class x protein4 protein.
          Length = 349

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 28/113 (24%), Positives = 45/113 (39%)
 Frame = -1

Query: 425 GKSPALSMTHKQIQQVXMFRTHSCGVVKPKFWLIFSVCTPYVIVIFIAKFKVRIHNAKVC 246
           G    +S+    I  + +FR   C    P + + F      V  +  A F     +    
Sbjct: 14  GLLSGISLILNLITIIAVFRLAFCKRKNPVYIVSFFNILSDVFQVSAATF-YSAPSIITS 72

Query: 245 GFRRLTSEHSRYVSILWLIFGFEVXFDTFLYIVQHMRRIYIVKQQSHRLLFTF 87
            F    S+ +   + L  IF F   F+T L +V  + R  I+  Q H+ +FTF
Sbjct: 73  SFLTSFSKTNTLNTTLSSIFLFLWYFETILQVVMGLNRYVIICLQKHK-IFTF 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,457
Number of Sequences: 27780
Number of extensions: 227639
Number of successful extensions: 520
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)